Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	1,707,029	A→G	100%	V37V (GTA→GTG)	rsxC →	SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,707,029	0	A	G	100.0%	290.5 / ‑6.7	89	V37V (GTA→GTG)	rsxC	SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (37/50);  minor base T (1/1);  total (38/51)

TCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAG  >  NC_000913/1706932‑1707125                                                                                                  |                                                                                                 tctcTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGcc                                                                                                <  2:2855431/100‑1 (MQ=255)  ctctGCCTTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATACACCGGAGTTGAAAACCCAGTCCACCGGTACACAGCTGCGCCAGGTagcg                                                                                               >  2:334898/1‑97 (MQ=255)  ctctGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGccc                                                                                               <  2:1171558/100‑1 (MQ=255)  ctctGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGccc                                                                                               >  1:1894719/1‑100 (MQ=255)   tctGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGcccc                                                                                              <  1:534345/100‑1 (MQ=255)   tctGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGcccc                                                                                              >  1:1555426/1‑100 (MQ=255)      gCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTgg                                                                                           >  1:1170055/1‑100 (MQ=255)      gCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTg                                                                                            <  2:1187407/99‑1 (MQ=255)       cATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGgc                                                                                          >  2:983892/1‑100 (MQ=255)       cATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGACAGGTGccc                                                                                               >  2:1274566/1‑95 (MQ=255)        aTTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGgcg                                                                                         <  2:2295852/100‑1 (MQ=255)        aTTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGgcg                                                                                         <  2:2294623/100‑1 (MQ=255)          tCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCa                                                                                       <  1:2082310/100‑1 (MQ=255)           cAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAg                                                                                      >  1:2723012/1‑100 (MQ=255)           cAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAg                                                                                      <  2:2073349/100‑1 (MQ=255)           cAGAAAAAATAAAAGCTGGGATTTCACCGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAg                                                                                      <  2:2429224/100‑1 (MQ=255)            aGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGATAACCCAGTCCAACGGTACACCCCTGCGCCAGGGGCACCTGGCGCAgg                                                                                     <  1:1027995/100‑2 (MQ=255)            aGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGc                                                                                     >  1:1688775/1‑100 (MQ=255)            aGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGGGCACCTGGCGCAgg                                                                                     <  1:1874148/100‑2 (MQ=255)             gAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGTTGCCCCTGGCGCAGc                                                                                     >  2:1726701/1‑99 (MQ=255)             gAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGGGCACCTGGCGCAggg                                                                                    <  1:161299/100‑3 (MQ=255)             gAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAAAGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCg                                                                                    >  1:960299/1‑100 (MQ=255)               aaaaaTAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGTCGCAGCGtt                                                                                  >  1:2719437/1‑100 (MQ=255)                   ataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATTAAAATCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGt                                                                              <  1:1062995/100‑1 (MQ=255)                   ataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGt                                                                              <  2:1004927/100‑1 (MQ=255)                     aaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGCGATGAAAACCCAGTCCCACGGTAAACCCCTGCGCCGGGTGCCCAGGGCGCAgagcgtcgtt                                                                             >  2:1786304/1‑90 (MQ=255)                     aaaatCTGGGATTTCAACGGAGGCATACATCCACCGGAGAAGAAAACCCAGTTCAACGGTAAACCCCTGCGCAAAGTTACCCGGGCAAAGTGTGTTGTTa                                                                            >  2:522297/1‑100 (MQ=255)                       aatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTAtt                                                                          <  1:1878936/100‑1 (MQ=255)                        atCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTc                                                                         <  1:2460253/100‑1 (MQ=255)                         tCTGGTATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTc                                                                         <  1:2071648/99‑1 (MQ=255)                          cTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCGGGCGCGGGGTTTTGTTTTTc                                                                         >  2:1784088/1‑98 (MQ=255)                            gggATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACt                                                                     <  1:2765466/100‑1 (MQ=255)                             ggATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTg                                                                    <  1:1625550/100‑1 (MQ=255)                             ggATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTg                                                                    <  2:1071937/100‑1 (MQ=255)                              gATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGa                                                                   >  2:1756246/1‑100 (MQ=255)                                 ttCAACGGCGGCCACCATCGAGCGGAGATGCAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAAc                                                                <  2:2862278/100‑1 (MQ=255)                                  tCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACa                                                               <  1:510509/100‑1 (MQ=255)                                   cAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAg                                                              <  1:1756266/100‑1 (MQ=255)                                     aCGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCa                                                            <  1:983898/100‑1 (MQ=255)                                      cggcggCATCCATCCACCGGAGATGATAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCa                                                            <  1:1288414/99‑1 (MQ=255)                                       ggccgcATCCATCCACCGGAGATGAAAACCCAGTCCAACTGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCa                                                            <  2:1182908/98‑1 (MQ=255)                                         cggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATAtt                                                        <  2:1555246/100‑1 (MQ=255)                                         cggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCAAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATAtt                                                        <  1:114104/100‑1 (MQ=255)                                              tccatccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGgcgc                                                   <  2:1718257/100‑1 (MQ=255)                                              tccatccaCCGGAGATG‑AAACCCAGTCCAACGGTACTCCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCt                                                  <  1:83882/100‑1 (MQ=255)                                               ccatccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCt                                                  <  1:655110/100‑1 (MQ=255)                                                catccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTg                                                 >  2:2297490/1‑100 (MQ=255)                                                   ccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAg                                              <  1:1806932/100‑1 (MQ=255)                                                   ccaCCGGAGATGAAAACCCAGTCCAACAGTCCACCCCTGCGACAGGTGCCCCTCGCGCAGCGTTTTGTTATTCAACTGAAATAGCatat                                                         >  2:2855517/1‑89 (MQ=255)                                                    caCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAgg                                             <  1:1201205/100‑1 (MQ=255)                                                      ccGGAGATGAAAACCCAGTCCAACGGTATATCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTg                                           <  1:540242/100‑1 (MQ=255)                                                      ccGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTg                                           >  2:2762011/1‑100 (MQ=255)                                                       cGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGa                                          <  1:1584836/100‑1 (MQ=255)                                                        ggAGATGAAAACCCAGTCCAACGGTTCACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAg                                         <  1:570356/100‑1 (MQ=255)                                                        ggAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAg                                         <  2:2771378/100‑1 (MQ=255)                                                         gagaTGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGt                                        <  1:3026688/100‑1 (MQ=255)                                                           gaTGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTtg                                      >  1:2742769/1‑100 (MQ=255)                                                             tGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTtgtg                                    >  1:1957124/1‑100 (MQ=255)                                                             tGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTtgtg                                    <  2:182864/100‑1 (MQ=255)                                                               aaaaCCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCg                                  <  2:1177556/100‑1 (MQ=255)                                                               aaaaCCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTATTATTCAACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCg                                  >  1:2353644/1‑100 (MQ=255)                                                                aaaCCCATTCCAACGGTACACCACTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGtt                                       <  2:2347015/94‑1 (MQ=255)                                                                aaaCCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGt                                 >  1:2770990/1‑100 (MQ=255)                                                                  aCCCAGTTCCACGGTACACCCCTGCGCCAGGTTCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTa                               <  1:1784108/100‑1 (MQ=255)                                                                  aCCCAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTa                               >  1:17990/1‑100 (MQ=255)                                                                   cccAGTCCAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCAAATTGGCGCTGAAGGTGAATTGTGCGTTa                               >  1:1052693/1‑99 (MQ=255)                                                                   cccAGTCCAACGGAACACCCCTGCGCAAGGTGAACCTGGAGCAGCGCTAAGTTATTCAACTGAAACAGCACATTGACGCTGAAGGTGAGTTGTGCGTTa                               >  2:1877558/1‑99 (MQ=255)                                                                         ccAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCgg                        >  1:990615/1‑100 (MQ=255)                                                                          cAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGc                       <  2:1963865/100‑1 (MQ=255)                                                                          cAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGc                       >  2:2037066/1‑100 (MQ=255)                                                                          cAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGc                       >  1:509378/1‑100 (MQ=255)                                                                          cAACGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGc                       <  1:2988524/100‑1 (MQ=255)                                                                           aaCGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTTTTTTTTTTCTTAAGCGACGTCTGGTCGCTGGATGTGGGTTGTGCGtt                                >  2:2577516/1‑90 (MQ=255)                                                                           aaCGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGc                       <  2:1960836/99‑1 (MQ=255)                                                                           aaCGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCg                      >  2:1355612/1‑100 (MQ=255)                                                                             cGGTACGCCCCTGCGCCAGGTGCCCCTAGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATAGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGa                     >  2:3044937/1‑99 (MQ=255)                                                                             cGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGAt                    >  1:1941730/1‑100 (MQ=255)                                                                             cGGTACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGAt                    <  1:2637866/100‑1 (MQ=255)                                                                             cGGTACACCCCTGCGCCAGGTGCCCCTCGCGCAGCGTTTTGTTATTCCACTGAAACAGGATATGGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCgg                        <  2:51105/96‑1 (MQ=255)                                                                               gTACACCCCTGCGCCAGGTGCCCCTGGCGATGCTTTTTGTTATTCCACTGAACCAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATaa                  <  1:2547419/100‑1 (MQ=255)                                                                               acaaaacgcTGCGCCAGGGGCACCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATaa                  >  1:1723409/9‑100 (MQ=38)                                                                                tACACCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATaaa                 <  2:1026546/100‑1 (MQ=255)                                                                                 acacCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAg                >  2:1508800/1‑100 (MQ=255)                                                                                  cacCCCTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGt               >  2:1148708/1‑100 (MQ=255)                                                                                    ccccTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGATGTGCGTTAGCGTCGGCGATAAAGTAt             >  1:1070981/1‑100 (MQ=255)                                                                                     cgcTGCGCCAGGGGCACCAGAAGCAGCGTTTTGTTATTCCACTGAAACAGCATAGTGGCGCTGAAGGTGATTTGTGCTTTAGCGTCGGCGATAAAGTa              >  2:2682668/3‑98 (MQ=255)                                                                                      ccTGCGCCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTAt             <  2:389461/98‑1 (MQ=255)                                                                                           gcCAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCgg      <  1:1617065/100‑1 (MQ=255)                                                                                            ccAGGTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGc     >  1:1780080/1‑100 (MQ=255)                                                                                               ggTGCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAg  >  1:2831658/1‑100 (MQ=255)                                                                                                  |                                                                                                 TCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAG  >  NC_000913/1706932‑1707125

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑