| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,795,229 | A→T | 15.8% | intergenic (‑77/+24) | btuC ← / ← ihfA | vitamin B12 ABC transporter permease/integration host factor (IHF), DNA‑binding protein, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,795,229 | 0 | A | T | 15.8% | 227.9 / 31.6 | 93 | intergenic (‑77/+24) | btuC/ihfA | vitamin B12 ABC transporter permease/integration host factor (IHF), DNA‑binding protein, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base A (42/36); new base T (9/6); total (51/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.04e-01 | |||||||||||
GTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCG > NC_000913/1795131‑1795327 | gttgGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCagag > 1:1181862/1‑100 (MQ=255)gttgGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCagag > 2:2579722/1‑100 (MQ=255) ttgGCGGGTAAGTGTCAGCATGGTATTCGTTTTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCagatc < 1:2049111/100‑3 (MQ=255) tgGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCg < 1:2493835/100‑1 (MQ=255) ggCGGGCAAGTGTGAGAATGGTATCCGTGCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGAAAAAAAAAAAAAAAAAGGCCGCAGAGCgg < 2:2405154/100‑1 (MQ=255) ggCGGGCAAGTGTCAGCATTGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCgg < 1:2905128/100‑1 (MQ=255) ggCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCgg < 2:655855/100‑1 (MQ=255) cGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGcc < 1:2579754/100‑1 (MQ=255) gCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGAATCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCggaattt > 1:1002497/1‑95 (MQ=255) aaGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCTCTGCGGCCttttt < 1:2647827/100‑1 (MQ=255) aGTGTCAGCATGGTATCCGTTCTTCTGAATTTTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCTCTGCGGCCtttttt < 1:974878/100‑2 (MQ=38) aGTGTAACCATGGTATCCGTTCTGCCGAAGTGTCATGGAGTTGATTTTACGGTGACTCTTCGACAGTGAAAACAAAAAAGGCCGAAGAGCGGCCttttt < 2:160724/99‑1 (MQ=255) gtgtCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGTGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTttag < 1:1301727/100‑1 (MQ=255) gtgtCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGAGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTttag < 1:2125992/100‑1 (MQ=255) gtgtCAGCATGGTATCCGTTCTGCTGAAGAGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTTAAAAGAAAAAAGGCCGCAGAGCGGCCTTTttag < 2:1823696/100‑1 (MQ=255) gtgtCAGAATGGTATCCGTTCTGCGGAAGTGTGATGGGGTTGATTTTACGGTGCCTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTtta < 2:2609354/99‑1 (MQ=255) gtCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGTTTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTttagtt < 1:1238375/100‑1 (MQ=255) gtCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTttagtt < 2:1829564/100‑1 (MQ=255) gtCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTttagtt < 1:360897/100‑1 (MQ=255) gtCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTttagtt > 1:1828703/1‑100 (MQ=255) gtCAGCATGCTATCCGTTTTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCAGCTCTGCGGCCttttttct < 2:1193887/99‑4 (MQ=38) tCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCTCTGCGGCCttttttcttn < 2:784076/100‑6 (MQ=38) cAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCTCTGCGGCCttttttctttt < 1:2272659/100‑7 (MQ=37) cAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTttagttag > 2:1378862/1‑100 (MQ=255) aGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGTCGCAGAGCGGCCTTTttagtt < 2:1592074/97‑1 (MQ=255) aGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGa > 2:43380/1‑100 (MQ=255) gCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGAt > 1:2647137/1‑100 (MQ=255) cATGGTATCCGTTCTGCTGAAGTGTCATTGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATc < 2:1443304/100‑1 (MQ=255) cATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATc < 1:1315863/100‑1 (MQ=255) gTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGAt < 1:2681905/100‑1 (MQ=255) tATCCGTTTTGCTGAATTGTCTTGGCTTTGATTTTACGGTGACTCTTCGACATTGCAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGAt < 1:2681989/99‑1 (MQ=255) tCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTAc < 2:1706692/100‑1 (MQ=255) tCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTAc > 2:2009188/1‑100 (MQ=255) ccGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGACCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACt > 1:930030/1‑100 (MQ=255) cGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTc > 1:2134092/1‑100 (MQ=255) gTTCTGCTGAAGTGTCATGGAGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTc > 2:946336/1‑99 (MQ=255) ttCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCg < 2:2861116/99‑1 (MQ=255) ctgctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTc > 1:2155659/1‑99 (MQ=255) tgctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCtt > 2:2019520/1‑100 (MQ=255) tgctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCtt > 2:703718/1‑100 (MQ=255) tgctgAAGTGTCATGACGTTGATTATACGGTGACTCTTAGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGAGTACACGTCtt > 2:211486/1‑100 (MQ=255) gctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTAGTCttt > 1:1440941/1‑100 (MQ=255) gctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTATAGTTAGATCAGATTACTCGTCttt > 1:282133/1‑100 (MQ=255) tgAAGTGTCATGGCGTTGATTTTACGGTGCCTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTgg > 1:850966/1‑100 (MQ=255) tgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTgg < 1:43380/100‑1 (MQ=255) tgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTgg < 2:2025881/100‑1 (MQ=255) gAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTggg > 1:462762/1‑100 (MQ=255) gAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTggg < 1:2985801/100‑1 (MQ=255) gtCCTGGCGTTGATTTTACGGTGACTCTTCGACCGTGAAAAGAAAAAAGGCCGAAGAGCGGCCCTGTTACTTAGATCAGATTACTCGTATTTAGGCGa > 2:2779582/1‑98 (MQ=255) gtCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAg > 2:2764872/1‑100 (MQ=255) aTGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGt > 2:1979170/1‑100 (MQ=255) aTGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTAGTCTTTGGGCGAAGCg > 2:1684386/1‑99 (MQ=255) tGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGtt > 1:1583688/1‑100 (MQ=255) gCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGtttt < 2:159321/100‑1 (MQ=255) gCGGTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGGCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGGGtttt < 2:687615/100‑1 (MQ=255) cGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTc > 1:2574089/1‑100 (MQ=255) cGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTc > 2:946047/1‑100 (MQ=255) cGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAATTAGATCAGATAACTCATATTTGGACGAAGCGTTTTc > 1:1156550/1‑100 (MQ=255) gTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCg > 1:801812/1‑100 (MQ=255) tGATTGTACGTGTACTCTTCGTCACTGTAAAAAAAAAAGGCCGCTGAGCTGCCTTTTTAGTTAGTTCATATTTCTCGTCTTTGCGCGAAGCGTTTTc < 2:2712456/97‑1 (MQ=255) agtttACGGTGACACTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGAccc > 1:2057394/3‑100 (MQ=255) aTTTTAGGGTTACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGTGCGGTCTTTTTAGTTCGATCAGTTTACTCGTCTTTGGGCGAAGCGTTTTCGAcct < 1:2888118/100‑2 (MQ=255) ttttACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGAccc > 1:2192632/1‑99 (MQ=255) ttttACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCg > 1:2107538/1‑100 (MQ=255) ttttACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCg > 2:777822/1‑100 (MQ=255) cGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCttt > 2:253175/1‑100 (MQ=255) gTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCttttt < 2:2174682/100‑1 (MQ=255) tGACTCTTCGACAGTTAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTa < 1:2579761/100‑1 (MQ=255) aCTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTaa > 2:304495/1‑99 (MQ=255) ctctTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACt > 2:1889249/1‑100 (MQ=255) ctctTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTAGTCTTTGGGCGAAGCGTTTTCGACACGGCTTTTTACCt > 2:477873/1‑100 (MQ=255) ttCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTc < 1:2204298/99‑1 (MQ=255) ttCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCt < 2:2523543/100‑1 (MQ=255) cGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGc > 2:2892583/1‑100 (MQ=255) gACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGcc < 1:2110467/100‑1 (MQ=255) aCAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGAGCGAAGAGTTTTAGACACGGCTTTTTAACTTATGctc > 1:2979/1‑98 (MQ=255) cAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCg > 1:202015/1‑100 (MQ=255) gTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCggg < 2:813923/100‑1 (MQ=255) gTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCggg < 1:1979193/100‑1 (MQ=255) tGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGAGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGt > 1:973957/1‑100 (MQ=255) gaaaagaaaaAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTc < 1:177472/100‑1 (MQ=255) actaaaaaGGCCGCTCTTCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTGTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCt > 2:638977/4‑97 (MQ=38) gaaaaAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGaa > 1:2159161/1‑99 (MQ=255) ctaaaaaGGCCGCTCTGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGaa > 1:2164809/3‑99 (MQ=38) ctaaaaaGGCCGCTCTGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAg > 2:1740419/3‑100 (MQ=38) ctaaaaaGGCCGCTCTGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAg > 2:157829/3‑100 (MQ=39) ctaaaaaGGCCGCTCTGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAACGTTATCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAg > 1:81179/3‑100 (MQ=38) taaaaaGGCCGCTCTGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAgg > 1:1972292/2‑100 (MQ=39) taaaaaGGCCGCTCTGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAgg > 1:1575260/2‑100 (MQ=39) aaaaaaTGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGTCCCGGCTTTTTAACTTCTGCCCGGGTCTGAAg < 1:2886768/99‑1 (MQ=255) aaaaaaGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAgg > 1:1517449/1‑100 (MQ=255) aaaaaGGCCGCTCTGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGt > 2:2317985/1‑100 (MQ=255) aaaaaGGCCGCTCTGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGAGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGt > 2:75286/1‑100 (MQ=255) gCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCTTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTcaccac > 2:1228082/1‑100 (MQ=255) cGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGGCTTTGGGCGAAGCGTTTTCGACCCGTCTTTTTACCTTCTGCCCCGGTCTGAAGGTcaccac > 2:1071421/1‑98 (MQ=255) cAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACgcgc < 2:1934720/100‑1 (MQ=255) gagCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGTAGCTTTTTTGACCCGGTGTTTTAACTTATGCCCGGGTCTGAAGGTCACCACGCGCCg < 2:898118/100‑1 (MQ=255) agCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGTGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCACGGGTCTGAAGGTAACAACGCGCCg > 2:1548970/1‑99 (MQ=255) | GTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCG > NC_000913/1795131‑1795327 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |