Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 2,173,076 | C→A | 100% | pseudogene (287/442 nt) | gatC ← | pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,173,076 | 0 | C | A | 94.7% | 352.4 / 6.2 | 116 | pseudogene (287/442 nt) | gatC | pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC |
Reads supporting (aligned to +/- strand): ref base C (2/5); new base A (45/64); total (47/69) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.99e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 116 total aligned reads displayed.
TGAAAATACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCA > NC_000913/2172980‑2173172 | tGAAAATACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGcc > 1:1081398/1‑100 (MQ=255) tGAAAATACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGcc < 1:2278468/100‑1 (MQ=255) tGAAAATACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGcc > 2:454981/1‑100 (MQ=255) gAAAATACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGccc < 1:1780351/100‑1 (MQ=255) aaaTACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTg < 2:1381358/100‑1 (MQ=255) aTACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGAt < 1:858735/100‑1 (MQ=255) tACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATc < 1:118856/100‑1 (MQ=255) tACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATc < 1:2781939/100‑1 (MQ=255) tACCGGTCAGATAAATTGCACAGATAATAATGAAACCGGGAATATTTTTCGGGGAGAAAAACTAAATCAATAACCAGGTAATAAGAAAACAGcccgaatc > 2:471852/1‑95 (MQ=255) tACCGGTCAGAGAAATTGCACCGATAATAATGAAACCGGGAATATGTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATc < 2:2269704/100‑1 (MQ=255) aCCGGTCAGATAAATTGCATCGATAATAATGTAACCGGGAATATTTTGTGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATcc < 1:918398/100‑1 (MQ=255) aCCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGa < 2:40246/97‑1 (MQ=255) aCCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATc < 2:835634/99‑1 (MQ=255) ccGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCa < 1:374187/100‑1 (MQ=255) cGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCAt < 1:965981/100‑1 (MQ=255) ggTCAGATAACTTGTACCGATAATAATGAAACCGGGAATAGTATGCGGTGAGAAAACCTGAATCAGTAACCAGATAATGGGAGAATAGCTCTTATCCAtt > 2:283308/1‑100 (MQ=255) ggTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCAtt < 2:1510010/100‑1 (MQ=255) gTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTg < 2:2829600/100‑1 (MQ=255) gTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTg < 2:411672/100‑1 (MQ=255) tCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGa < 1:2034375/100‑1 (MQ=255) cAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGaa < 1:2656204/100‑1 (MQ=255) cAGAGAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGCGAGAACAGCCCTGATCCAtt < 2:1851169/97‑1 (MQ=255) aGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAg < 2:1544505/100‑1 (MQ=255) aGATAAATTGAACCGATAATAATGAAACCGGGAAGATTTGGAGGGGAGAAAGCATGAATCAGTAACGAGGTAATGGGAGAACAGTCCTGATCGATTGAAg < 2:1159471/100‑1 (MQ=255) gctAAATTGCACCGATAATAATAAAACCGGGAATATTTACCGCGGGGAAAACCTGAATCAGTAACCAGGTAATTGGAGAACAGCCCTGATACAt > 2:1469038/3‑94 (MQ=255) gATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATAAGTAAAAAGGTAATGGGAGAACAGAACTGATAAATTGaa > 1:873407/1‑98 (MQ=255) aaTTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGccacc < 2:2723507/100‑1 (MQ=255) aaTTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGccacc < 1:2761799/100‑1 (MQ=255) aaTTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGccacc > 1:179537/1‑100 (MQ=255) aTTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGccacc < 1:1762857/99‑1 (MQ=255) tGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGATAATAGAAGAACAGCCCTGATCCATTGAAGCCACCATa > 1:102708/1‑100 (MQ=255) ccGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATAcccc > 1:1856800/1‑100 (MQ=255) taataaTGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGc > 1:2217841/1‑100 (MQ=255) taataaTGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATACATTGAAGCCACCATACCCCCg > 2:1469610/1‑98 (MQ=255) aataatGTAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCATGATGCATTGAAGCCACCATAcccc > 2:374384/1‑95 (MQ=255) taatGAAACCGGGAATATCTTGCAGGGAGAAAACATGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATGGAAGCCACCATACCCCCgcc > 2:533094/1‑95 (MQ=255) aatGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCTGTAATCAGTTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCtttt < 1:819453/100‑1 (MQ=255) aatGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCtttt > 1:95832/1‑100 (MQ=255) atGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTa < 1:2712638/100‑1 (MQ=255) tgttactgtgAATTTTTTGCTTGGAGTTATCCTGAATTTGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTaa < 1:1755667/91‑1 (MQ=255) tGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACACCCGGCTTTTaa > 1:1977114/1‑100 (MQ=255) gAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAAc < 1:993395/100‑1 (MQ=255) gAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAAc > 1:634764/1‑100 (MQ=255) gAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATAGAAGCCACCATACCCCCGGCTTTTAAc > 1:659490/1‑100 (MQ=255) aaaCCGGGAATATTTTGCGGGGAGAATACCTGAATCATTAATCATGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACg < 1:502499/100‑1 (MQ=255) aaaCCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCACCCTGAACCATTGAAGCCACCTTACCCCCGGCTTTTa > 2:1032851/1‑97 (MQ=255) gggAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCa < 2:1401998/100‑1 (MQ=255) gggAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAACCACCATACCCCCGGCTTTTAACGCCCCa > 1:825218/1‑100 (MQ=255) ggAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAg < 2:273928/100‑1 (MQ=255) aaTATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCa < 2:1156380/100‑1 (MQ=255) atatTTTGCGGGGAGAAAACCTGATTCAGTAACCAGGTAATTGGAGAACAGCTCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCAt < 2:662161/100‑1 (MQ=255) tatTTTGCGGTGAGAAATCCTGAATCAGTATCCACGTAATTGGAGAATAGCTCTGATCTATTGAAGCCATTATACTCTCGGTTTTTAACGCCCCAGCAt < 2:2650394/99‑1 (MQ=255) tatTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCAtt < 2:402509/100‑1 (MQ=255) tatTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAACCACCATACCCCCGGCTTTTAACGCCCCAGCAtt < 1:2151629/100‑1 (MQ=255) ttGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAgcc > 2:584812/1‑100 (MQ=255) tGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAgccg > 1:1276762/1‑100 (MQ=255) gCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAgccgc > 1:225142/1‑100 (MQ=255) cGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAgccgcc < 1:1450345/100‑1 (MQ=255) cGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTAAAACCACCATACCCCCGGCTTTTAACGCCCCAGCATTAgccgcc > 1:2482919/1‑100 (MQ=255) gggAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAg < 1:2937349/100‑1 (MQ=255) ggAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGt < 1:2787030/100‑1 (MQ=255) agaAAACCTTAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTg < 2:583249/100‑1 (MQ=255) gaAAACCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTgg > 2:359150/1‑100 (MQ=255) acaCCTGAATCAGTAACCAGGAAATGGGAGAACAGCCATGATCCATTGAAACCACCATACCACCGGCTTTTAAAGCCCCAGCATTAGCCGCCAGTTcgg > 2:1019502/3‑99 (MQ=255) aaaCCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGgt > 1:1938793/1‑100 (MQ=255) aaaCCTGAATCAGTAACCAGGTAATGGGAAAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGgt < 1:1165582/100‑1 (MQ=255) aaCCTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGgtg < 1:3634/100‑1 (MQ=255) cTGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGc < 2:705714/100‑1 (MQ=255) tGAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCa > 2:2922264/1‑100 (MQ=255) gAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCaa < 2:16997/100‑1 (MQ=255) gAATCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCACCAGTGTGGTGTGCaa > 1:1422928/1‑100 (MQ=255) aaTCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCaaa > 1:1784911/1‑100 (MQ=255) aTCAGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAAc < 2:827599/100‑1 (MQ=255) gatctAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAAcc < 2:1466498/96‑1 (MQ=255) aGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCaa > 2:2866813/1‑100 (MQ=255) aGTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACACCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCaa > 2:2422349/1‑100 (MQ=255) gTAACCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTCGGGTGTGCAAACCAAt > 2:2892628/1‑100 (MQ=255) aaCCAGGTAATGGGAGAACAGCCCTGTTCTATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAg < 1:1016529/100‑1 (MQ=255) aaCCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCagatc > 1:1466513/1‑96 (MQ=255) aaCCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAg < 2:1794571/100‑1 (MQ=255) aaCCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAg < 1:45159/100‑1 (MQ=255) aCCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGt > 1:2588867/1‑100 (MQ=255) aCCAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGt > 2:44019/1‑100 (MQ=255) cAGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGttt < 1:2511948/100‑1 (MQ=255) aGGTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGGTGGGTGTGCAAACCAATAGTTTg > 2:1703073/1‑100 (MQ=255) ggTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGc > 1:1496493/1‑100 (MQ=255) ggTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGc > 1:2182423/1‑100 (MQ=255) gTAATGGTAGAACAGCCTTGATCCATTCAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGTCAGTTGGGTGTGCAAACCAATAGTTTGCg < 2:2946796/100‑1 (MQ=255) gTAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCg < 2:1969394/100‑1 (MQ=255) tAATGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTg < 2:95831/97‑1 (MQ=255) aTGGGAGAACAGCCCTGATCCATTGAAGCCACCATTCCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACTATTGGTTTGcacac < 1:2533645/100‑5 (MQ=255) aTGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACTATTGGTTTGcacac < 2:2863562/100‑5 (MQ=255) aTGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTcg < 2:2230150/100‑1 (MQ=255) tGGGAGAACAGTTTTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTcn < 1:1250423/99‑2 (MQ=255) tGGGAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTcgc < 2:1938770/100‑1 (MQ=255) tGGGAGAACAGCCCTGATCAATTGTAGCAACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACTATTGGTTTGcacac < 2:2863469/99‑5 (MQ=255) ggAGAACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGa > 1:2864150/1‑100 (MQ=255) gaACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATcc > 2:1681108/1‑100 (MQ=255) gaACAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATcc < 2:699399/100‑1 (MQ=255) aaCAGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCca > 2:1384572/1‑100 (MQ=255) | TGAAAATACCGGTCAGATAAATTGCACCGATAATAATGAAACCGGGAATATTTTGCGGGGAGAAAACCTGAATCAGTAACCAGGTAATGGGAGAACCGCCCTGATCCATTGAAGCCACCATACCCCCGGCTTTTAACGCCCCAGCATTAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCA > NC_000913/2172980‑2173172 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |