BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	216,568	C→T	100%	A146T (GCC→ACC)	yaeF ←	putative lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	216,568	0	C	T	100.0%	363.9 / ‑6.7	112	A146T (GCC→ACC)	yaeF	putative lipoprotein
Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (49/62); total (49/63)

Only 100 of 112 total aligned reads displayed.

ACGGATTCAGTGAGCACATCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGCAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATCGCTTTTTTAAGGGAAAC  >  NC_000913/216475‑216664

aCGGATTCAGTGAGCACATCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAAcgc                                                                                            >  1:1015204/1‑100 (MQ=255)

aCGGATTCAGTGAGCACATCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAAcgc                                                                                            >  1:2372056/1‑100 (MQ=255)

aCGGATTCAGTGAGCACATCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAAcgc                                                                                            >  2:1260925/1‑100 (MQ=255)

   gATTCAGTGAGCACATCTGGCGAGTCACCATAAAGGTAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGt                                                                                         <  1:1069942/100‑1 (MQ=255)

   gATTCAGTGAGCACATCTGGCGAGTCAACATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACAGCTATATTTGATTTTATTGGTAAAGGCgg                                                                                          >  2:1100582/1‑99 (MQ=255)

     ttCAGTGAGCACATCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGa                                                                                       >  1:2682734/1‑100 (MQ=255)

      tCAGTGAGCACATCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGat                                                                                      <  2:2811008/100‑1 (MQ=255)

        aGTGAGCACATCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGatat                                                                                    <  1:1317519/100‑1 (MQ=255)

         gTGAGCACATCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATc                                                                                   >  2:550045/1‑100 (MQ=255)

           gAGCACATCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCtg                                                                                 <  1:3010318/100‑1 (MQ=255)

            aGCACATCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCtgt                                                                                >  2:2486463/1‑100 (MQ=255)

             tctcaTCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCtgtg                                                                               <  2:643460/97‑1 (MQ=255)

             gCACATCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTTGTAAACGCGGTGATATCtgtn                                                                               <  2:83411/100‑2 (MQ=255)

             gCACATCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCtgtg                                                                               >  2:2503543/1‑100 (MQ=255)

              cacaTCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTgg                                                                              >  1:2097070/1‑100 (MQ=255)

               acaTCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGc                                                                             <  1:2353963/100‑1 (MQ=255)

                caTCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATTtgtgaga                                                                            >  1:643464/1‑97 (MQ=255)

                caTCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCt                                                                            >  2:109501/1‑100 (MQ=255)

                caTCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCt                                                                            <  2:1053093/100‑1 (MQ=255)

                   cTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGTTGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCttgt                                                                         <  1:337175/100‑1 (MQ=255)

                    tGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCttgtt                                                                        >  2:2852210/1‑100 (MQ=255)

                     ggCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCttgttg                                                                       >  1:992423/1‑100 (MQ=255)

                        gAGTCACCATATAGGGAATAAAGTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTAGTGGTTAACGCGGTGATATTTGTGGCTTGTTGCgg                                                                    <  2:2487787/100‑1 (MQ=255)

                         aGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCggg                                                                   <  2:1309337/100‑1 (MQ=255)

                          gTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCgggg                                                                  <  2:2327726/100‑1 (MQ=255)

                           tCACCATAAAGGGAATAAATTCGACAATGCAGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCgggg                                                                  <  1:1488392/99‑1 (MQ=255)

                            cACCATAAAGGTAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTa                                                                <  2:485739/100‑1 (MQ=255)

                            cACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTa                                                                >  1:1532696/1‑100 (MQ=255)

                            cACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTa                                                                <  2:1015198/100‑1 (MQ=255)

                             aCCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTaa                                                               >  1:2029495/1‑100 (MQ=255)

                              ccATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAg                                                              >  2:57961/1‑100 (MQ=255)

                               cATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGa                                                             >  2:731753/1‑100 (MQ=255)

                                aTAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGAt                                                            <  2:401492/100‑1 (MQ=255)

                                 tAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATc                                                           >  2:2826578/1‑100 (MQ=255)

                                  aaaGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATcc                                                          <  1:2232021/100‑1 (MQ=255)

                                   aaGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCg                                                         >  1:2556868/1‑100 (MQ=255)

                                    aGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCgg                                                        <  1:2066901/100‑1 (MQ=255)

                                    aGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCgg                                                        <  2:279083/100‑1 (MQ=255)

                                    aGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCgg                                                        <  1:1353008/100‑1 (MQ=255)

                                    aGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCCGGGTAAGATcctg                                                        <  1:2058211/100‑3 (MQ=255)

                                    aGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGATGATATCTGTGGCTTGTTGCGGGGTAAGATCCgg                                                        >  1:1202300/1‑100 (MQ=255)

                                    aGGGAATAAATTCGACAAGGCCGCGATAGTTATAACCGGTATCTTTGATTTTATTGGTAAACGCGGTGATATGTGTGGCTTGTTGCGGGGTAAGATCCgg                                                        <  2:1130195/100‑1 (MQ=255)

                                     gggAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCggg                                                       <  1:2344019/100‑1 (MQ=255)

                                      ggAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGa                                                      >  1:1814139/1‑100 (MQ=255)

                                       gAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGAc                                                     <  1:1665899/100‑1 (MQ=255)

                                       gAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGAc                                                     >  1:2934230/1‑100 (MQ=255)

                                       gAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGAc                                                     <  2:252959/100‑1 (MQ=255)

                                          tAAATTCGACAATGCCGCGATAGTTATTTCCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCg                                                  <  1:1005870/100‑1 (MQ=255)

                                          tAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCg                                                  >  1:1933572/1‑100 (MQ=255)

                                           aaaTTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGt                                                 <  2:1199861/100‑1 (MQ=255)

                                           aaaTTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGt                                                 >  1:1116591/1‑100 (MQ=255)

                                            aagtCGACAATGGCGCGAGAGTTGTAACCGCTTTCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCg                                                  <  2:705549/95‑1 (MQ=255)

                                             aTTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTaa                                               >  2:1164532/1‑100 (MQ=255)

                                              ttCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAg                                              >  2:1620936/1‑100 (MQ=255)

                                                 gagaaTGCCGCGATAGTTATAGCGGCGATCTTTGAGTTTAGGGGTAAACGCGGTGAGATCTGTGGCTTGTTGCGGGGTAAGAGGCGGGAGTGGTAAGACg                                           <  2:2797849/97‑1 (MQ=255)

                                                 gACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACg                                           >  2:2508238/1‑100 (MQ=255)

                                                 gACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACg                                           <  2:2756021/100‑1 (MQ=255)

                                                 gACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACg                                           <  2:626634/100‑1 (MQ=255)

                                                  aCAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACgn                                          <  2:328646/100‑2 (MQ=255)

                                                  aCAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGa                                          <  2:1534973/100‑1 (MQ=255)

                                                   cAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGaa                                         >  1:1145453/1‑100 (MQ=255)

                                                   cAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGaa                                         >  2:2678854/1‑100 (MQ=255)

                                                       gCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGGTCCGGGACTCGTAAGACGAAAAGc                                     <  2:1038729/100‑1 (MQ=255)

                                                        ccGCGATATTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGTTGATATCTGTAGCTTATTGCGGGGTAAGAGCCGGGACTCGTAAGACGAAAAGc                                     <  1:89953/99‑1 (MQ=255)

                                                        ccGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCt                                    <  2:1194661/100‑1 (MQ=255)

                                                        ccGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCt                                    >  1:1302213/1‑100 (MQ=255)

                                                        ccGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCt                                    >  1:419701/1‑100 (MQ=255)

                                                        ccGCGATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTAGCTAGTAACAGGGTAAGATCCGGAACTCGTAAGACGAAAAGCt                                    >  1:896387/1‑100 (MQ=255)

                                                          gcgATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTa                                  >  1:2679327/1‑100 (MQ=255)

                                                           cgATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTAt                                 <  1:524239/100‑1 (MQ=255)

                                                            gATAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATc                                >  1:2227663/1‑100 (MQ=255)

                                                             aTAGTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCa                               <  1:2303361/100‑1 (MQ=255)

                                                                gTTATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTa                            >  1:2957351/1‑100 (MQ=255)

                                                                gTTATAACAGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGAAGAAAAGCTTATCagat                            >  1:676942/1‑97 (MQ=255)

                                                                 ttATAACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTAt                           >  1:2399866/1‑100 (MQ=255)

                                                                  tataACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATg                          >  1:872915/1‑100 (MQ=255)

                                                                    taACCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCt                        <  2:845863/100‑1 (MQ=255)

                                                                      aCCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGTACTAAGATCCGCGATTCGTAAGACGAAAATCTTATCACTATGCt                        <  2:1157816/98‑1 (MQ=255)

                                                                      aCCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCtt                       <  1:1066734/99‑1 (MQ=255)

                                                                      aCCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTc                      >  2:887850/1‑100 (MQ=255)

                                                                      aCCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTc                      <  1:1840954/100‑1 (MQ=255)

                                                                      aCCGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCATAAGACGAAAAGCTTATCACTATGCTTc                      >  1:2153289/1‑100 (MQ=255)

                                                                      aCCGCTATCTTTGATTTTATTGGTAAACGCAGTGATAGCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTc                      <  2:2112436/100‑1 (MQ=255)

                                                                       ccGCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCa                     >  2:856534/1‑100 (MQ=255)

                                                                        cGCTGTATTTGATTTTATTGGCACACGCGGTGATATCTGTGGCTTGTTGCTGGGTAAGATCCTGGACTTTTAAGTCTAATAGCTTATGACTATGCTTCa                     <  2:2740345/99‑1 (MQ=255)

                                                                         gCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATc                   >  1:2749556/1‑100 (MQ=255)

                                                                         gCTATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATc                   <  1:2508267/100‑1 (MQ=255)

                                                                           tATCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATCg                  <  1:1779373/99‑1 (MQ=255)

                                                                             tCTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATCGCtt               >  1:409652/1‑100 (MQ=255)

                                                                              cTTTTATTTTATTGGTAAACGCGGTTATATCTGTTGCTTGTTGCTGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATCGCttt              <  2:2749524/100‑1 (MQ=255)

                                                                              cTTTGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATCGCttt              >  1:2927330/1‑100 (MQ=255)

                                                                               tttGATTTTATTGGTAAACGCGGTGATATCTGTTGCTTGTTGCTGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATCGCtttt             >  1:2579194/1‑100 (MQ=255)

                                                                                ttGATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATCGCttttt            <  2:2185514/100‑1 (MQ=255)

                                                                                  gATTTTATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATCGCTTTTTTa          <  2:832554/100‑1 (MQ=255)

                                                                                    ttttATTGGTAAACGCGGTGATATCTTTGGCTTGTTTCGGGGTTAGATCCGGGACTCGTAAGACGAAAATCTTATCTCTATGCTTCATCGCTTTTTTAAg        <  2:1938321/100‑1 (MQ=255)

                                                                                    ttttATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGCAAAGCTTATCACTATGCTTCATCGCTTTTTTAAg        >  2:615500/1‑100 (MQ=255)

                                                                                    ttttATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATCGCTTTTTTAAg        <  1:2486492/100‑1 (MQ=255)

                                                                                    ttttATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATCGCTTTTTTAAg        <  1:18208/100‑1 (MQ=255)

                                                                                      ttATTGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATCGCTTTTTTAAggg      <  2:886987/100‑1 (MQ=255)

                                                                                          tGGTAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATCGCTTTTTTAAGGGAAAc  >  2:1847844/1‑100 (MQ=255)

ACGGATTCAGTGAGCACATCTGGCGAGTCACCATAAAGGGAATAAATTCGACAATGCCGCGATAGTTATAACCGCTATCTTTGATTTTATTGGCAAACGCGGTGATATCTGTGGCTTGTTGCGGGGTAAGATCCGGGACTCGTAAGACGAAAAGCTTATCACTATGCTTCATCGCTTTTTTAAGGGAAAC  >  NC_000913/216475‑216664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`