BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	2,852,356	T→A	100%	L74Q (CTG→CAG)	hypD →	hydrogenase maturation protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,852,356	0	T	A	100.0%	375.3 / NA	114	L74Q (CTG→CAG)	hypD	hydrogenase maturation protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (68/46); total (68/46)

Only 100 of 114 total aligned reads displayed.

GGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACTGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCGGGGAAACA  >  NC_000913/2852259‑2852452

ggCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGAACAGTTACTGCCGGAAACCTTTGAGTTTATCCAAGGTCGGGGGTGCCCGGTGTGCGTACAGc                                                                                                >  2:2831952/1‑100 (MQ=255)

ggCGGTCATACCCACGCCATCTTTAAATTCGGCCTCGACCAGCTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCAGGGTGCCCGGTGCGCGGACAGc                                                                                                >  2:543957/1‑100 (MQ=255)

   ggTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGa                                                                                             >  2:2342664/1‑100 (MQ=255)

    gTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGAt                                                                                            <  1:2371294/100‑1 (MQ=255)

    gTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGAt                                                                                            <  1:1467184/100‑1 (MQ=255)

      cATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATg                                                                                           >  2:2932890/1‑99 (MQ=255)

        tACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGt                                                                                        <  1:1775103/100‑1 (MQ=255)

         aCCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTa                                                                                       <  1:1772405/100‑1 (MQ=255)

          cccACGCTATCTTTAAATTCGTCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAg                                                                                      >  2:1907189/1‑100 (MQ=255)

          cccACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAg                                                                                      >  1:880202/1‑100 (MQ=255)

          cccACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAg                                                                                      >  1:2126575/1‑100 (MQ=255)

          cccACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCAGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAg                                                                                      >  1:2384268/1‑100 (MQ=255)

             aCGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAAt                                                                                   <  2:2374495/100‑1 (MQ=255)

              cGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATc                                                                                  <  2:2397744/100‑1 (MQ=255)

              cGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGAGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATc                                                                                  >  1:1043036/1‑100 (MQ=255)

               gCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCg                                                                                 <  1:65798/100‑1 (MQ=255)

                 tATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGac                                                                               <  2:1194796/100‑1 (MQ=255)

                    cTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACAcc                                                                            <  1:3007046/100‑1 (MQ=255)

                    cTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACAcc                                                                            >  2:235305/1‑100 (MQ=255)

                    cTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACAcc                                                                            >  2:668787/1‑100 (MQ=255)

                     tttAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCt                                                                           >  1:866909/1‑100 (MQ=255)

                        aaaTTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCTGGGTGCGCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCg                                                                        <  2:2430480/100‑1 (MQ=255)

                        aaaTTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCg                                                                        >  2:172588/1‑100 (MQ=255)

                        aaaTTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCg                                                                        <  1:2831652/100‑1 (MQ=255)

                        aaaTTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGACGATGGGTAGAATCGACACCTGCg                                                                        >  1:1285848/1‑100 (MQ=255)

                         aaTTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGt                                                                       >  2:642195/1‑100 (MQ=255)

                          aTTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTg                                                                      >  1:2853992/1‑100 (MQ=255)

                           ttCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTgg                                                                     <  2:2777944/100‑1 (MQ=255)

                              ggCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTTCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGCGgaga                                                                  >  2:1964602/1‑100 (MQ=255)

                              ggCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGgaga                                                                  >  1:1376982/1‑100 (MQ=255)

                               gCCTCGACCAGTTACTGCCGGAAAACGTTTAGTTTATTCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGAt                                                                 <  1:1640651/100‑1 (MQ=255)

                               gCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGgaga                                                                  <  2:1422684/99‑1 (MQ=255)

                               gCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGAt                                                                 >  1:210604/1‑100 (MQ=255)

                                ccTCGACCAGTTACTGCCGGAAAACGTTGATTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGAtt                                                                <  2:571414/100‑1 (MQ=255)

                                ccTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGAtt                                                                >  2:2542922/1‑100 (MQ=255)

                                  tCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTgc                                                              <  1:1021374/100‑1 (MQ=255)

                                   cGACCAGTTACTGCCGGAAAACGTTTAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTgcc                                                             <  1:2831984/100‑1 (MQ=255)

                                     aCCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTgccag                                                           <  1:1570603/100‑1 (MQ=255)

                                      ccAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTgccagc                                                          <  1:1191256/100‑1 (MQ=255)

                                      ccAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTaccagc                                                          >  1:1685062/1‑100 (MQ=255)

                                        aGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGTTGGGTAGAATCGACACCTGCGTGGAGATTgccagcca                                                        >  2:536312/1‑100 (MQ=255)

                                           tACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATcc                                                     >  1:1013217/1‑100 (MQ=255)

                                             cTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCgg                                                   >  2:2247118/1‑100 (MQ=255)

                                               gCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCgg                                                   >  2:1714949/1‑98 (MQ=255)

                                               gCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGaa                                                 >  2:2464257/1‑100 (MQ=255)

                                               gCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGaa                                                 >  1:1969939/1‑100 (MQ=255)

                                                ccGGAAAACGTTGAGTTTATCTACTGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACTTGCGTGGAGATTGCCAGCCATCCGGaa                                                 <  2:798550/99‑1 (MQ=255)

                                                ccGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCTGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAg                                                <  1:2568327/100‑1 (MQ=255)

                                                ccGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAg                                                <  2:2253213/100‑1 (MQ=255)

                                                ccGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAg                                                >  1:1673130/1‑100 (MQ=255)

                                                ccGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAg                                                <  2:2228014/100‑1 (MQ=255)

                                                 tcttccgatctGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGt                                               <  2:2355854/90‑1 (MQ=255)

                                                 cGGATAACGTTGAGTTTATCCACGTTCCGGGGTGCCAGGTGTGCGTACAGTCGATGGGTAGAATCGACACCTTCGTGGAGTTTGCCAGCCATCCGGAAg                                                <  2:18558/99‑1 (MQ=255)

                                                 cGGAACACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAg                                                >  2:2879301/1‑99 (MQ=255)

                                                  ggAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGt                                               >  1:2236575/1‑99 (MQ=255)

                                                  ggAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTc                                              >  2:311849/1‑100 (MQ=255)

                                                   gAAAACGTTAAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCATGGAGATTGACAGCCATCAGGAAGtaa                                             >  1:1425937/1‑98 (MQ=255)

                                                     aaaCGTTGTGTTTATCCACGGTCCGGGGTGCTTGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCAt                                            <  1:395536/99‑1 (MQ=255)

                                                      aaCGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCAtct                                          >  2:1440072/1‑100 (MQ=255)

                                                      aaCGTTGAGTTTATCCACGGTACGGGGTGCCCGGTGTGCGTACAGCCGATTGGTAGAATCGACACCTGCGTGGATATTGCCAGCCATCCGGAAGTCAtct                                          <  2:1543666/100‑1 (MQ=255)

                                                       aCGTTGCGTTTATGCACGGTCAGGGGTGCAAGGTGTACGTATAGTCGAAGGGTAGAATAGACTCCTTAGGGGAGATTGCCAGCCATCCAGAAGGCAtct                                          >  2:1866328/1‑99 (MQ=255)

                                                        cGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCTTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCAtcttc                                        <  1:1220510/100‑1 (MQ=255)

                                                        cGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCAtcttc                                        <  2:2939391/100‑1 (MQ=255)

                                                         gTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCAtcttct                                       <  2:598689/100‑1 (MQ=255)

                                                           tGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGt                                     <  1:86620/100‑1 (MQ=255)

                                                              gTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTAcc                                  >  1:564938/1‑100 (MQ=255)

                                                               tttATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTACCAGCCATCCGGAAGTCATCTTCTGTACCt                                 >  1:2471261/1‑100 (MQ=255)

                                                                ttATCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCtt                                >  2:2982156/1‑100 (MQ=255)

                                                                  aTCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCTATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTg                              <  1:1907212/100‑1 (MQ=255)

                                                                   tCCACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTg                              >  2:2485373/1‑99 (MQ=255)

                                                                    ccACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGc                            >  1:1830609/1‑100 (MQ=255)

                                                                    ccACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGc                            >  2:2754733/1‑100 (MQ=255)

                                                                    ccACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGc                            >  2:2551556/1‑100 (MQ=255)

                                                                     naCGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGAGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCg                           >  1:783997/2‑100 (MQ=255)

                                                                     cACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCg                           >  1:2780448/1‑100 (MQ=255)

                                                                     cACGGTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCg                           >  2:1527113/1‑100 (MQ=255)

                                                                      aCGGTCCGGGGTGCCCGGTGTGTGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGa                          >  2:21451/1‑100 (MQ=255)

                                                                        ggTCCGGGGTGCCGGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACg                        >  2:1877093/1‑100 (MQ=255)

                                                                        ggTCCGGGGTGCCCGTTGTGCGTACAGCCGATGGGTATAATCGACTCCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACg                        <  1:1769310/100‑1 (MQ=255)

                                                                        ggTCCGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACg                        >  1:1258987/1‑100 (MQ=255)

                                                                            cGGGGTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCAt                    >  2:142038/1‑100 (MQ=255)

                                                                             ggggTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATg                   >  1:2284065/1‑100 (MQ=255)

                                                                               ggTGCCCGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATgcg                 >  2:2723195/1‑100 (MQ=255)

                                                                                    ccGGTGTGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGc            >  2:1384867/1‑100 (MQ=255)

                                                                                     cGGTGTGCGTACAGCCTATGGGTAGAAGCGACGCCTGCGTGGAGATTGCCAGCCATCCGGACGTCATCTTCTGTACCTTTGGCGACTCCATGCGCGTGcc           <  2:1007532/100‑1 (MQ=255)

                                                                                       gtgtGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCgg         <  2:278886/100‑1 (MQ=255)

                                                                                       gtgtGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCgg         <  1:642199/100‑1 (MQ=255)

                                                                                       gtgtGCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCgg         <  2:446258/100‑1 (MQ=255)

                                                                                        tgtgCTTACAGCCGATGGGTATAATCTTCTCCTGCGTGTAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTAGGCGACGCCATGCGCGTGCCggg        <  1:949200/100‑1 (MQ=255)

                                                                                         gtgCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCgggg       <  2:1376969/100‑1 (MQ=255)

                                                                                          tgCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCGGGGa      >  1:715970/1‑100 (MQ=255)

                                                                                          tgCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCGGGGa      >  1:596615/1‑100 (MQ=255)

                                                                                          tgCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTAGCGACGCCATGCGCGTGCCGGGGa      >  1:1452654/1‑100 (MQ=255)

                                                                                           gCGTACAGCCGATGGGTAGAATCGACACCTGCGTGTAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCGGGGaa     >  2:3038299/1‑100 (MQ=255)

                                                                                           gCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCGGGGaa     >  1:345148/1‑100 (MQ=255)

                                                                                           gCGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCGGGGaa     >  1:836709/1‑100 (MQ=255)

                                                                                            cGTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCGGGGaaa    >  1:1768778/1‑100 (MQ=255)

                                                                                             gTACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCGGGGAAAc   >  1:429699/1‑100 (MQ=255)

                                                                                              tACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCGGGGAAACa  >  2:2367447/1‑100 (MQ=255)

                                                                                              tACAGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCCACGCCATGCGCGTGCCGGGGAAACa  >  2:2277098/1‑100 (MQ=255)

GGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACTGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCGGGGAAACA  >  NC_000913/2852259‑2852452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`