BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	3,648,042	T→C	100%	intergenic (‑254/‑486)	dinQ ← / → arsR	UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,648,042	0	T	C	100.0%	431.2 / ‑6.7	130	intergenic (‑254/‑486)	dinQ/arsR	UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (65/64); total (65/65)

Only 100 of 130 total aligned reads displayed.

TATGCGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCG  >  NC_000913/3647945‑3648136

tATGCGCATTGCCAGAGTGAAAATGCCTCAGAGTTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCAt                                                                                              <  1:2385075/100‑1 (MQ=255)

   gcgcATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGt                                                                                           >  2:670056/1‑100 (MQ=255)

   gcgcATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGt                                                                                           >  2:1655994/1‑100 (MQ=255)

    cgcATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTa                                                                                          >  1:2883516/1‑100 (MQ=255)

    cgcATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTATCAGCATGGTa                                                                                          >  1:262591/1‑100 (MQ=255)

        ttGCCAGAGTGAAAATGCCTCAGAGTTAACTGGATAATCATTCAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAg                                                                                      <  1:1699413/100‑1 (MQ=255)

         tGCCAGAGTTAAAATGCCTTAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGc                                                                                     <  1:2950349/100‑1 (MQ=255)

          gCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGTTATTAGc                                                                                     >  2:148157/1‑99 (MQ=255)

          gCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCa                                                                                    >  1:1365997/1‑100 (MQ=255)

          gCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCa                                                                                    <  2:2893038/100‑1 (MQ=255)

           tctgagTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCAt                                                                                   <  1:1274303/97‑1 (MQ=255)

           ccAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCAt                                                                                   >  1:530608/1‑100 (MQ=255)

           ccAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCAt                                                                                   <  2:262199/100‑1 (MQ=255)

             agagTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTg                                                                                 >  1:2900307/1‑100 (MQ=255)

              gagTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCAtaga                                                                                >  2:1274291/1‑97 (MQ=255)

               agTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGAACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGAt                                                                               >  2:1372182/1‑100 (MQ=255)

                gTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATg                                                                              >  1:270461/1‑100 (MQ=255)

                gTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATg                                                                              <  1:43560/100‑1 (MQ=255)

                gTGAAAATGCCTCAGAGCTAACAGGATAATCGTACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATg                                                                              <  2:2044095/100‑1 (MQ=255)

                  gAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCg                                                                            <  2:25953/100‑1 (MQ=255)

                    aaaTGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGtt                                                                          <  2:1783867/100‑1 (MQ=255)

                    aaaTGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGtt                                                                          >  2:1010486/1‑100 (MQ=255)

                     aaTGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTa                                                                         <  1:2189186/100‑1 (MQ=255)

                     aaTGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTa                                                                         <  1:1121586/100‑1 (MQ=255)

                     aaTGCCTAAGAGCTAACGGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCTTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTa                                                                         <  2:804419/100‑1 (MQ=255)

                      aTGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCggt                                                                          <  2:1160410/98‑3 (MQ=255)

                         ccTCAGAGCTAACTGGATAATCATACAGTACTTGCAGTTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAgatg                                                                     <  2:2043593/100‑1 (MQ=255)

                          cTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAgatga                                                                    >  2:1688368/1‑100 (MQ=255)

                             agagCTAACTGGATAATCTTACAGTACATGCAGGTTATAAAACCAGTACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATgg                                                                 <  2:229303/100‑1 (MQ=255)

                             agagCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATgg                                                                 <  1:1093281/100‑1 (MQ=255)

                             agagCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATgg                                                                 <  1:6710/100‑1 (MQ=255)

                              gagCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATgg                                                                 <  2:2139321/99‑1 (MQ=255)

                              gagCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGc                                                                <  1:1504032/100‑1 (MQ=255)

                              gagCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGc                                                                <  1:2967037/100‑1 (MQ=255)

                              gagCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGc                                                                <  2:884148/100‑1 (MQ=255)

                              gagCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGc                                                                <  1:523204/100‑1 (MQ=255)

                                gCTAACTGGATAATCATATAGTACATGCAGTTTATAAAACCAGGACGTCCTTGCAATAGTTTCCGCATGGTATTAGTATTGATGCGTTAGGTGATGGCTa                                                              <  2:2478330/100‑1 (MQ=255)

                                gCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTa                                                              >  1:1282394/1‑100 (MQ=255)

                                  tAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTAtc                                                            >  1:889721/1‑100 (MQ=255)

                                   aaCTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATTGTATTAGCATTGATGCGTTAGATGATGGCTAtct                                                           <  2:2117276/100‑1 (MQ=255)

                                   aaCTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTagat                                                           >  1:2081491/1‑97 (MQ=255)

                                   aaCTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTAtct                                                           >  1:1241368/1‑100 (MQ=255)

                                    aCTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTAtctc                                                          >  2:1634962/1‑100 (MQ=255)

                                      tGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCAc                                                        >  2:613008/1‑100 (MQ=255)

                                       ggATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACt                                                       >  1:2043712/1‑100 (MQ=255)

                                       ggATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACt                                                       <  2:1106452/100‑1 (MQ=255)

                                         aTAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTcc                                                     >  1:2692121/1‑100 (MQ=255)

                                           aaTCATACAGTACATGCCGGTTATAAAACCAGCACTGCCTTGCAAGAGTTTCAGCATGTTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTcc                                                     <  2:3015254/98‑1 (MQ=255)

                                           aaTCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCGTTGATGCGTTAGATGATGGCTATCTCACTCCAg                                                   <  2:2863792/100‑1 (MQ=255)

                                            aTCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGt                                                  >  2:54042/1‑100 (MQ=255)

                                            aTCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGt                                                  >  2:1188411/1‑100 (MQ=255)

                                            aTCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGt                                                  >  2:88933/1‑100 (MQ=255)

                                            aTCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGt                                                  >  1:1692315/1‑100 (MQ=255)

                                            aTCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGt                                                  >  1:1803993/1‑100 (MQ=255)

                                              cATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCa                                                <  1:1956545/100‑1 (MQ=255)

                                              cATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCa                                                <  1:2796468/100‑1 (MQ=255)

                                               aTACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCag                                               >  1:489104/1‑100 (MQ=255)

                                                tACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCaga                                              <  2:2383081/100‑1 (MQ=255)

                                                  cAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGc                                            >  2:2560033/1‑100 (MQ=255)

                                                     tACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGccac                                         >  2:2775692/1‑100 (MQ=255)

                                                     tACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGccac                                         >  2:2775968/1‑100 (MQ=255)

                                                      aCATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGccacc                                        >  2:475722/1‑100 (MQ=255)

                                                       cATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGccacca                                       >  1:1661346/1‑100 (MQ=255)

                                                       cATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGccacca                                       <  2:3058/100‑1 (MQ=255)

                                                       cATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGccacca                                       >  2:177168/1‑100 (MQ=255)

                                                        aTGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCaa                                      >  1:2452797/1‑100 (MQ=255)

                                                         tGCGGGTTATAAAACCAGCACGTTCTTGTAATAGTTTCTGCGTGGTATTAGTATTGATGCGTTAGATGATGGCTATCTCACGCCAGTCAGAGccacca                                       <  1:2897115/98‑1 (MQ=255)

                                                         tGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAAc                                     >  1:767368/1‑100 (MQ=255)

                                                         tGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAAc                                     >  2:2681929/1‑100 (MQ=255)

                                                          gCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACt                                    <  1:2548259/100‑1 (MQ=255)

                                                            aGGTTATAAAACCAGCACGTCCTTGCAATTGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCa                                  <  1:2776000/100‑1 (MQ=255)

                                                            aGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCa                                  <  1:2775724/100‑1 (MQ=255)

                                                             ggTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCa                                  >  2:2754344/1‑99 (MQ=255)

                                                             ggTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAg                                 >  2:1925997/1‑100 (MQ=255)

                                                             ggTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAg                                 <  1:1911327/100‑1 (MQ=255)

                                                                tataAAACCATCACGTTCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGc                              <  1:1493183/100‑1 (MQ=255)

                                                                tataAAACCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGc                              <  1:886967/100‑1 (MQ=255)

                                                                   aaaaCCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTgg                           >  2:2118000/1‑100 (MQ=255)

                                                                   aaaaCCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTg                            >  2:626124/1‑99 (MQ=255)

                                                                    aaaCCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGa                          <  1:2817226/100‑1 (MQ=255)

                                                                    aaaCCAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGa                          <  2:1312417/100‑1 (MQ=255)

                                                                    aaaCCAGCACGTCCTTGCAATAGTTTAAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGa                          >  2:1486871/1‑100 (MQ=255)

                                                                      aCCAGCACGTCCTTGGAATAGTATCAGCATGGTATTAGCATTGATGCGTTAGATTAGGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGaaa                        <  2:127264/100‑1 (MQ=37)

                                                                       ccAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAg                       >  1:2360693/1‑100 (MQ=255)

                                                                       ccAGCACGTCCTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAg                       <  2:2928418/100‑1 (MQ=255)

                                                                                ccTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAAcc              >  2:1004038/1‑100 (MQ=255)

                                                                                 cTTGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCg             >  2:1608606/1‑100 (MQ=255)

                                                                                  ttGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCg             <  2:112141/99‑1 (MQ=255)

                                                                                   tGCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGAc           <  1:2943996/100‑1 (MQ=255)

                                                                                    gCAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACg          >  1:1240544/1‑100 (MQ=255)

                                                                                     cAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGc         >  1:2015202/1‑100 (MQ=255)

                                                                                     cAATAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGc         >  1:2206398/1‑100 (MQ=255)

                                                                                      aaTAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCa        <  1:775296/100‑1 (MQ=255)

                                                                                       aTAGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCaa       >  1:859060/1‑100 (MQ=255)

                                                                                         aGTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAg     <  1:2727820/100‑1 (MQ=255)

                                                                                          gTTTCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGt    >  2:1101263/1‑100 (MQ=255)

                                                                                           tttCAGCATGGTATTAGCATTGAGGCGTTAGATGATGGGTATAGGACTCCAGTCAGAGCGAGCAAATAAGGGATGGAAAGTAAAAAAACGAc           >  2:2072685/1‑92 (MQ=255)

                                                                                            ttCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCg  <  1:1508367/100‑1 (MQ=255)

                                                                                            ttCAGCATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAACCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGttg  <  1:2048554/100‑3 (MQ=255)

                                                                                            ttCAGCATGGTATTAGCATTGAGGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGCGGCAAAGTc   >  2:1759087/1‑99 (MQ=21)

TATGCGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCG  >  NC_000913/3647945‑3648136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`