| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,805,475 | T→C | 100% | N159S (AAT→AGT) | waaP ← | kinase that phosphorylates core heptose of lipopolysaccharide |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,805,475 | 0 | T | C | 99.1% | 427.8 / ‑4.7 | 127 | N159S (AAT→AGT) | waaP | kinase that phosphorylates core heptose of lipopolysaccharide |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (56/69); total (57/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
TGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGCCCA > NC_000913/3805376‑3805566 | tgtgCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGAt < 2:2676748/100‑1 (MQ=255) gCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTa > 1:383652/1‑100 (MQ=255) ccGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATc > 1:1474782/1‑100 (MQ=255) gATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTAt > 2:2033409/1‑97 (MQ=255) gATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATccc < 1:2278483/100‑1 (MQ=255) tGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTg > 1:244545/1‑100 (MQ=255) tGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTg < 1:1260677/100‑1 (MQ=255) gCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGc < 1:2708371/100‑1 (MQ=255) cAGATCGATAACTGAAATTTTTAATTAATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAACGTGGCAAATGTCACCGTCGCGGTGACTTAtacgt > 2:2876767/1‑93 (MQ=255) aGATCGATAACTGAAATTTTTAATTCATCTTCCCTGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAg < 2:399775/100‑1 (MQ=255) aGACCGATAACTGAAATTTTGAATTAATCTGCCCGGTCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAg < 2:2887423/100‑1 (MQ=255) gATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAg < 2:2674487/99‑1 (MQ=255) gATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGt > 1:1692493/1‑100 (MQ=255) gATCGATAACTGAAAGTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGt < 2:2655871/100‑1 (MQ=255) aTCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTa < 2:199836/100‑1 (MQ=255) tCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTAt < 1:1483954/100‑1 (MQ=255) cGATAACTGGAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATg > 1:2020411/1‑100 (MQ=255) cGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATg > 2:658708/1‑100 (MQ=255) aTAACTGAAATTTTTAATTCATCTTCCCGTCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCa < 1:162280/100‑1 (MQ=255) tAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCa > 1:1011656/1‑99 (MQ=255) tAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCAt < 1:1963034/100‑1 (MQ=255) aaCTTAAATTTTTAATTCATCTTCCCTGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCAtt < 1:1475806/100‑1 (MQ=255) aaCTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCAtt < 2:1267046/100‑1 (MQ=255) cTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATAAAACAAAAAATAACAAATGTAACAATCGCAGTAACTTATCCCTGCAGTATGCAtttt > 1:4262/1‑100 (MQ=255) gAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTAc > 1:5176/1‑100 (MQ=255) gAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGC‑AATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACg < 1:1516010/100‑1 (MQ=255) aaaTTTTTAATTCATCTTCCCGGCTAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACCGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACg < 1:2145135/100‑1 (MQ=255) aaaTTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACg < 1:2747184/100‑1 (MQ=255) aTTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGc < 2:2683808/99‑1 (MQ=255) aTTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCa > 2:1249645/1‑100 (MQ=255) aTTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCa < 1:2092955/100‑1 (MQ=255) tttttAATTCATCTTCCCGGCCAGTAAATGTCAAATGAAGTAAATAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCAc < 1:18682/100‑1 (MQ=255) ttCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGtt > 2:248319/1‑100 (MQ=255) tCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTg > 2:2306075/1‑100 (MQ=255) aTCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCt > 2:589144/1‑100 (MQ=255) ncTTCCCGGCCAGGAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTa > 2:1877781/2‑100 (MQ=255) cTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATATTACGCACCATAGTTGCTa > 1:597405/1‑99 (MQ=255) ttCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTaca > 1:2156266/1‑100 (MQ=255) cccGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACg > 1:1939361/1‑100 (MQ=255) cccGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACg < 2:1692473/100‑1 (MQ=255) cccGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACg > 2:2086862/1‑100 (MQ=255) cgtccAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTg < 2:1800570/97‑1 (MQ=255) cGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGt < 2:1729272/99‑1 (MQ=255) ggCCAGTTAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTTGTGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGc < 1:134870/100‑1 (MQ=255) ggCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGc > 1:1240396/1‑100 (MQ=255) ggCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGc < 2:1040226/100‑1 (MQ=255) ggCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGc < 2:1287485/100‑1 (MQ=255) gCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCg > 1:1608863/1‑100 (MQ=255) gCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCg < 2:333392/100‑1 (MQ=255) gCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCg > 1:1685938/1‑100 (MQ=255) taGTAAATGGCAAATGAAGTAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGa < 1:1255624/98‑1 (MQ=255) aGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATc < 1:541115/100‑1 (MQ=255) aGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATc > 2:33671/1‑100 (MQ=255) aGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATc < 1:236703/100‑1 (MQ=255) gTAAATGCCAAATGAAGCAAAAAGTGGCAAATGTAACAGTTGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACAAGTGCg < 2:1032945/96‑1 (MQ=255) tAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTTGTGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAg < 1:1024502/100‑1 (MQ=255) aaaTGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCTTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGc < 1:857982/100‑1 (MQ=255) aaaTGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGc > 2:1601167/1‑100 (MQ=255) aTGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCAt < 2:437651/100‑1 (MQ=255) tGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATa > 2:623606/1‑100 (MQ=255) ggCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATAc > 2:3019277/1‑100 (MQ=255) ggCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATAc < 1:2900946/100‑1 (MQ=255) ggCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCACTACAGTATGCATAATACGCACCATAATTGCTACACGTGCGATCAGCATAc > 1:303030/1‑100 (MQ=255) gCAAATGAAGCTGAAAGTGGCAAATGTAACCGTCGCTGTGACTTTTCTCTACAGTATGCATTTTACGCTCCATTTTTGCTTCATGGGCGATCAGc < 2:2432777/95‑1 (MQ=255) cAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGc > 1:1045727/1‑100 (MQ=255) aaaTGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCt < 1:2086885/100‑1 (MQ=255) aaaTGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCt > 2:2191553/1‑100 (MQ=255) aaTGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCtt < 2:1073375/100‑1 (MQ=255) aaTGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCtt < 2:1490071/100‑1 (MQ=255) gAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAac < 2:2206341/100‑1 (MQ=255) aGCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAacac < 1:89943/100‑1 (MQ=255) gCAAAAAGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACg > 1:132153/1‑100 (MQ=255) catagatgggCGAATGTCACAGTCGCGGTGGCGATTGCCTGCCGTATGCAGTTTAACAACCAGAGTTGCTTAACGTGAGATCAGCATACGCTTa < 2:2914382/86‑1 (MQ=255) aaaaaGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACAAGTGCGATCAGCATACGCTTAACACGta > 1:1250779/1‑100 (MQ=255) aaaaaGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGta < 2:329996/100‑1 (MQ=255) aaaaaGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGta < 1:68685/100‑1 (MQ=255) aaaaaGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTAAACGTGCGATCAGCATACGCTTAACACGta > 1:1341544/1‑100 (MQ=255) aaaaGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGtat < 2:1891373/100‑1 (MQ=255) aGTGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATc < 2:1425490/100‑1 (MQ=255) tGGCAAATGTAACAGTCGCGGTGACTTATTCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGTTCAGCATACGCTTAACACGTATATCan < 2:1658271/100‑2 (MQ=255) tGGCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAg < 2:2114888/100‑1 (MQ=255) ggCAAATGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCGACACGTGCGATCAGCATACGCTTAACACGTATATCAgg > 2:1647939/1‑100 (MQ=255) aaaTGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCgg > 1:1050512/1‑100 (MQ=255) aaTGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCggg < 2:244542/100‑1 (MQ=255) aaTGTAACAGTCGCGGTGACTTAACAATGCGGTGTGGATTTTACGCAACATATTTGCTACACGTGCGATGAGCATACGCGTAACACGTATATccg > 2:3044801/1‑93 (MQ=255) aTGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGTGGGt > 1:1961919/1‑100 (MQ=255) aTGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCggg > 1:1417714/1‑99 (MQ=255) aTGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGt > 1:794690/1‑100 (MQ=255) tGTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGtt > 1:274372/1‑100 (MQ=255) gTAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTg < 1:2382628/100‑1 (MQ=255) tAACAGTCGCGGTGACTTATTTTTTTATTATTCTTTTTTTGTACCATAGTTGCTACACGTTTGATAAGCATACGCTTAACACGTATATCAGGCGGGTTg > 2:459013/1‑99 (MQ=255) tAACAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGa > 1:1754991/1‑100 (MQ=255) aaCAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGAc < 1:2025567/100‑1 (MQ=255) cAGTCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTg < 2:1133492/100‑1 (MQ=255) aGTCGCAGTAATTTACCCATGAAGTATACTTTTTCCACAACAAAGTTCCTACACCCGCGGTCAGAATACGCTTAACACGTATATCAGGcaagttcacc < 2:556129/98‑10 (MQ=255) ntCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGcc > 2:2906765/2‑100 (MQ=255) tCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCCTACGCTTAACACGTATATCAGGCGGGTTGACTGccc < 1:2147287/100‑1 (MQ=255) tCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGccc < 2:2786018/100‑1 (MQ=255) tCGCGGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGccc < 2:2512228/100‑1 (MQ=255) cgcgGTGACTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGccc < 2:1527528/99‑1 (MQ=255) | TGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTGACTGCCCA > NC_000913/3805376‑3805566 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |