Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,017,924 G→A 100% D198N (GAC→AAC)  rmuC → DNA recombination protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,017,9240GA100.0% 329.7 / ‑6.7 102D198N (GAC→AAC) rmuCDNA recombination protein
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base A (57/44);  total (58/44)

Only 100 of 103 total aligned reads displayed.

AACGCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCGACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGTCAG  >  NC_000913/4017829‑4018021
                                                                                               |                                                                                                 
aaCGCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGcaacaa                                                                                               <  2:2691893/100‑1 (MQ=255)
  cGCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCTTCGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATa                                                                                             <  1:64349/100‑1 (MQ=255)
   gCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGCCAACAATaa                                                                                            >  2:2676451/1‑100 (MQ=255)
    ccATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATaaa                                                                                           >  1:517156/1‑100 (MQ=255)
    ccATACCCTGACCCACGAAATTCGCAATCTACAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTTACTCGCGCGCTGAACGGCAACAATaa                                                                                            >  2:3009292/1‑99 (MQ=255)
     cATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATaaaa                                                                                          <  1:843990/100‑1 (MQ=255)
      aTACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAAc                                                                                         >  1:55588/1‑100 (MQ=255)
        aCCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAAccc                                                                                       >  2:1072455/1‑100 (MQ=255)
         cccTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCa                                                                                      <  2:2187609/100‑1 (MQ=255)
           cTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGAGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAgg                                                                                    <  2:414515/100‑1 (MQ=255)
            tGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAggg                                                                                   <  2:1696546/100‑1 (MQ=255)
                cgaCGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAAc                                                                               >  1:2050690/3‑100 (MQ=255)
                ccACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAAc                                                                               >  2:819166/1‑100 (MQ=255)
                ccACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAAc                                                                               <  1:1080258/100‑1 (MQ=255)
                 cACGAAATTCGCAATCTCCAGCAACTCAACGCTCAAATGTCCGAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACt                                                                              <  2:2131299/100‑1 (MQ=255)
                 cACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACt                                                                              >  2:783625/1‑100 (MQ=255)
                 cACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACt                                                                              >  1:483115/1‑100 (MQ=255)
                 cACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACt                                                                              >  1:1690150/1‑100 (MQ=255)
                  aCGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTg                                                                             >  1:2630459/1‑100 (MQ=255)
                  aCGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTg                                                                             >  1:633200/1‑100 (MQ=255)
                  aCGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTg                                                                             <  1:2396671/100‑1 (MQ=255)
                    gAAATTCGCAATCTCCAGCAACTCAACGCGCCAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTTAAAGGCAATAATAAAACCCAGGGCAACTggg                                                                           <  2:324012/100‑1 (MQ=255)
                    gAAAATCGCAGTCTCCTGCAACTCCACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTggg                                                                           <  2:712791/100‑1 (MQ=255)
                     aaaTTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTgggg                                                                          <  2:2188327/100‑1 (MQ=255)
                     aaaTTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTgggg                                                                          >  1:256296/1‑100 (MQ=255)
                      aaTTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGc                                                                         >  1:787201/1‑100 (MQ=255)
                        ttCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCg                                                                        >  2:2949131/1‑99 (MQ=255)
                        ttCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGa                                                                       <  1:2031057/100‑1 (MQ=255)
                        ttCGCAATCCCCAGCAACTCAACGCGGAAATGGCCCAGGAAGAGATCAACCTGACGCTCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGAGGCGa                                                                       <  2:1407427/100‑1 (MQ=255)
                           gCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGTCAACAATAAAACCCAGGGCAACGGGGGCGATgt                                                                    >  2:2896053/1‑100 (MQ=255)
                           gCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGgt                                                                    >  2:2716946/1‑100 (MQ=255)
                           gCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGgt                                                                    >  1:2686906/1‑100 (MQ=255)
                           gCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGgt                                                                    >  1:905051/1‑100 (MQ=255)
                            cAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGgta                                                                   >  2:1057553/1‑100 (MQ=255)
                              aTCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGgtagt                                                                 >  2:865791/1‑100 (MQ=255)
                               tctcAAGCAACTAAACGCGCAAATGGCCCAAGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAATCCCTGGGCAACTGGGGCGAGgtagt                                                                 <  2:927626/99‑1 (MQ=255)
                                 tcCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTAtt                                                              >  2:2287965/1‑100 (MQ=255)
                                 tcCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTAtt                                                              >  2:261231/1‑100 (MQ=255)
                                  ccAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTg                                                             >  2:1436499/1‑100 (MQ=255)
                                  ccAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTg                                                             >  2:1834514/1‑100 (MQ=255)
                                  ccAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTg                                                             >  2:100612/1‑100 (MQ=255)
                                  ccAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTg                                                             >  1:2779703/1‑100 (MQ=255)
                                   cAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGa                                                            <  1:1761918/100‑1 (MQ=255)
                                       aaCTAAACGCGCAAATGGCCCAGGAAGCGATCAACCTGATGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGTTAGTATTGAcgtg                                                        <  1:2059081/100‑3 (MQ=255)
                                        aCTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCgg                                                       >  1:2781712/1‑100 (MQ=255)
                                        aCTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCgg                                                       >  2:1423224/1‑100 (MQ=255)
                                        aCTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCgg                                                       <  1:2205311/100‑1 (MQ=255)
                                         cTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCggg                                                      >  1:2437354/1‑100 (MQ=255)
                                         cTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCggg                                                      <  1:2862664/100‑1 (MQ=255)
                                           cAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGAAGTATTGACGCGGGTg                                                    >  2:1879659/1‑100 (MQ=255)
                                             aCGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCt                                                  >  1:1979095/1‑100 (MQ=255)
                                             aCGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCt                                                  <  1:1452835/100‑1 (MQ=255)
                                               gcgcAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTgg                                                <  1:655189/100‑1 (MQ=255)
                                                cgcAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGa                                               <  1:1361925/100‑1 (MQ=255)
                                                 gcAACTGGCCCAGGAAGCGATCAACCAGACGCGCGCGCGGAAAGGCAATATTATAACCCTGTGCAACTGGGGCGAGTTTGTATTGACGCGGGTGCTGGAg                                              <  2:1087612/100‑1 (MQ=255)
                                                 gcAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGTGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGa                                               <  2:2326385/99‑1 (MQ=255)
                                                 gcAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAg                                              <  2:1032411/100‑1 (MQ=255)
                                                 gcAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAg                                              <  1:1925224/100‑1 (MQ=255)
                                                  cAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCCACTCGGGCGAGGTAGTATTGACGCGGGTGCTGGAg                                              >  2:1034199/1‑99 (MQ=255)
                                                   aaaTGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGc                                            <  1:256061/100‑1 (MQ=255)
                                                       ggCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTcc                                        >  1:2160982/1‑100 (MQ=255)
                                                       ggCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTcc                                        <  2:1979072/100‑1 (MQ=255)
                                                        gCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCg                                       <  2:1615674/100‑1 (MQ=255)
                                                         cccAGGAAGCGATCAACCTGACGCGCGCACTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGATTCCgg                                      >  2:143496/1‑100 (MQ=255)
                                                         cataGGAAGACATCAACCTGACGCTCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCgg                                      <  1:2907956/97‑1 (MQ=255)
                                                           cgatctgCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTc                                    <  1:138265/94‑1 (MQ=255)
                                                              gAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGc                                 >  2:308355/1‑100 (MQ=255)
                                                                aGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAAGCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCg                                >  2:1656413/1‑99 (MQ=255)
                                                                 gCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTg                              <  1:2367852/100‑1 (MQ=255)
                                                                 gCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTAGTGACGCGGGTGCTGGAGGCTTCCGGTcagatcg                              >  2:138263/1‑94 (MQ=255)
                                                                     tCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAgg                          >  1:2657705/1‑100 (MQ=255)
                                                                     tCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAgg                          <  1:672192/100‑1 (MQ=255)
                                                                     tCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAgg                          <  1:1834536/100‑1 (MQ=255)
                                                                      cAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAggg                         >  2:2998663/1‑100 (MQ=255)
                                                                         ccTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGta                       <  2:2686874/99‑1 (MQ=255)
                                                                          cTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatg                     >  2:912954/1‑100 (MQ=255)
                                                                           tGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatga                    >  1:1923746/1‑100 (MQ=255)
                                                                            gACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACACGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatgaa                   >  1:899543/1‑100 (MQ=255)
                                                                               gcgcgcgcTGAAAGGCAACAATAAAACCCAGTGCAACTGGGGCTATGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatgaatat                <  1:37462/100‑1 (MQ=255)
                                                                                cgcgcgcTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatgaatatg               >  1:1169504/1‑100 (MQ=255)
                                                                                cgcgcgcTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatgaata                 >  2:85672/1‑98 (MQ=255)
                                                                                cgcgcgcTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGAGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGGGAAGGGtatgaata                 >  2:1542515/1‑98 (MQ=255)
                                                                                 gcgcgcTGAAAGGTAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatgaatatg               <  1:3011623/99‑1 (MQ=255)
                                                                                    cgcTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGaaa            >  1:1983237/1‑99 (MQ=255)
                                                                                    cgcTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAAc           <  2:1297289/100‑1 (MQ=255)
                                                                                      cTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAAccc         >  2:600674/1‑100 (MQ=255)
                                                                                      cTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAAccc         >  1:1201128/1‑100 (MQ=255)
                                                                                      cTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAAccc         >  1:2004337/1‑100 (MQ=255)
                                                                                       tGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCa        >  1:2773086/1‑100 (MQ=255)
                                                                                         aaaGGCAACAATAAAACCCAGGTCAACTGGTTCGAGTTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAg       <  1:1638954/99‑1 (MQ=255)
                                                                                         aaaGGCAACAATAAAACCCAGGGCACCTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAgg      <  2:1245190/100‑1 (MQ=255)
                                                                                          aaGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGt     >  1:2966286/1‑100 (MQ=255)
                                                                                           aGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGTc    <  1:1752943/100‑1 (MQ=255)
                                                                                           aGGCAACAAGAAAACCCAGGGCAACTGGGGCGAGGGAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGTc    <  2:2966253/100‑1 (MQ=255)
                                                                                            ggCAACAATAAAACCCATTGCAACTGGGGCGAGGTAGTATTGACTCGGGTGCTGGAGGCTTCCTGTCTGCGTGAAGGGTATGAATATGAAACCCa        <  2:2363798/95‑1 (MQ=255)
                                                                                            ggCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGCAACCCAGGTCa   <  2:730315/100‑1 (MQ=255)
                                                                                            ggCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGTc    >  2:2273244/1‑99 (MQ=255)
                                                                                            ggCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGTCa   >  1:2566265/1‑100 (MQ=255)
                                                                                            ggCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGTCa   >  1:1985861/1‑100 (MQ=255)
                                                                                             gCGACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGTCAg  >  2:747596/1‑100 (MQ=255)
                                                                                               |                                                                                                 
AACGCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCGACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGTCAG  >  NC_000913/4017829‑4018021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑