| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,098,512 | C→A | 100% | R259R (CGC→CGA) | rhaS → | transcriptional activator of rhaBAD and rhaT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,098,512 | 0 | C | A | 99.2% | 399.9 / ‑4.1 | 127 | R259R (CGC→CGA) | rhaS | transcriptional activator of rhaBAD and rhaT |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (67/59); total (68/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.35e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
AAGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCATATTG > NC_000913/4098415‑4098607 | aaGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACg < 2:767121/100‑1 (MQ=255)aaGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACg < 1:738297/100‑1 (MQ=255) gCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCATATCGCTGTGGATTAAGCGAAAGTAACCACATTTAGACGCTTTTTcgacga > 1:1764639/1‑99 (MQ=255) cccGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTcgacgan < 2:1164380/99‑2 (MQ=255) ccGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGagag < 2:2432029/100‑1 (MQ=255) ccGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGagag < 2:2589981/100‑1 (MQ=255) aCATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCCGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGttt < 2:1655261/100‑1 (MQ=255) aCATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACTAGAGttt < 1:1584564/100‑1 (MQ=255) cATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGttt < 2:1203193/99‑1 (MQ=255) cATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTa < 2:2360406/100‑1 (MQ=255) cTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACt > 1:170002/1‑100 (MQ=255) cTGCTACGCCACAGCGAGGCCAGCGGTACTGACATCGCCTACCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACt > 2:1646930/1‑100 (MQ=255) tGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACt > 1:388487/1‑99 (MQ=255) tGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTg > 2:1666662/1‑100 (MQ=255) gCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTgg > 1:690869/1‑100 (MQ=255) gCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTgg > 2:2428391/1‑100 (MQ=255) gCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCAGTGGATTCAGCGACAGTAACCACTTTTGGACGCTTTTTCGACGACAGTTTAAATgg > 2:1749845/1‑100 (MQ=255) cTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGt > 1:1864325/1‑100 (MQ=255) cTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTATTCAACGCTTTTTCGACGAGAGATTAACTGGt > 1:2377375/1‑100 (MQ=255) tACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTc < 2:690865/100‑1 (MQ=255) cGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCAc < 2:2366012/100‑1 (MQ=255) gCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCAcc > 1:2851297/1‑100 (MQ=255) acacaGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACCCTTTTTCGACGGGAACTTAAATGGTCACcg > 2:2711997/2‑100 (MQ=255) cacaGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACcgc > 2:1295545/1‑100 (MQ=255) caGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGt > 2:781654/1‑100 (MQ=255) aGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTg < 2:1027117/100‑1 (MQ=255) gCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGa < 1:137285/100‑1 (MQ=255) gCGAGGCCAGCGTTACTGACATAGACTATCGAAGTGGATTAAGCGACAGTAACAACATAAAGAAGATTTTTCGACGAGAGATTAAATGGTAACagc > 2:459010/1‑96 (MQ=255) cGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGat < 2:2761104/100‑1 (MQ=255) cGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGat > 1:1213015/1‑100 (MQ=255) cGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGa < 2:410801/99‑1 (MQ=255) ggCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATAtt > 1:105388/1‑100 (MQ=255) ggCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGACAGTTTAACTAGTCACCGCGTGata > 1:1676059/1‑98 (MQ=255) gCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTc > 2:2467464/1‑100 (MQ=255) gCCAGCGTTACTGACATCGCATATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTc > 2:1855966/1‑100 (MQ=255) ccAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCg < 1:2045797/100‑1 (MQ=255) cAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGc > 2:1085569/1‑100 (MQ=255) cAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGc > 2:1512837/1‑100 (MQ=255) cAGCGTTACTGACATCGCATATCGCTGTGGATTCAGCGACGGTAACCACTTTTGTACGCTTTTTCGACGAGAGTTTAATTGGTCACCGCGTGATATTCGc < 2:856830/100‑1 (MQ=255) aGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGcc < 1:1615562/100‑1 (MQ=255) gCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGAAAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGcc < 1:717750/99‑1 (MQ=255) gTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAgg < 2:520737/100‑1 (MQ=255) ttACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCTggg > 2:2275858/1‑100 (MQ=255) tACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGATTAACTGGTCACCGCGTGATATTCGCCAGGGa > 1:1064522/1‑100 (MQ=255) gACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACggg > 1:1081221/1‑100 (MQ=255) cATCGCCTATCGCTGTGGATTCAGCGACAGTAACAACTTTTCGACGCTTTTTAGACGAGAGTTTAACTGATCAGGGCGTGATATTCGCAAGGGACg > 2:634595/1‑96 (MQ=255) aTCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGCGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGAAGGGAt < 2:599509/99‑1 (MQ=255) aTCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGATTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATg > 1:932969/1‑100 (MQ=255) tCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATgg > 1:1675470/1‑100 (MQ=255) tCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATgg < 2:105387/100‑1 (MQ=255) cGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGc < 1:1511543/100‑1 (MQ=255) gCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCt > 1:764678/1‑100 (MQ=255) ccTATCGCTGTGGATTCAGCGAAAGTAACCACTTTTCGACGCTTTTTCGACGAGAGATTAACTGGTAACCGCGTGATATTCGACAGGGACGGGATGGCtt > 2:28352/1‑100 (MQ=255) tATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTc < 2:2320318/100‑1 (MQ=255) tATCGCTGTGGATTCAGCGACAATAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTc > 2:1320603/1‑100 (MQ=255) aTCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTTACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCt < 1:2145431/100‑1 (MQ=255) aTCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCt < 1:312829/100‑1 (MQ=255) tctcTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTg < 2:215784/97‑1 (MQ=255) tCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTg < 2:2857015/100‑1 (MQ=255) tCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTg > 1:290689/1‑100 (MQ=255) cGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGc < 2:2995523/100‑1 (MQ=255) cTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCaa > 2:2821020/1‑100 (MQ=255) cTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCaa < 1:420468/100‑1 (MQ=255) cTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCaa > 2:893366/1‑100 (MQ=255) cTGTGGATTCAGCGACAGTAACCACTCTTCGACGCTTTTTCGACGAGAGTTTAACTGTTCACCGCGTGATATTCACCAGGGACGGAATAGCTTTCTGCaa > 1:1041599/1‑100 (MQ=255) tgtgGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAAt > 2:1725884/1‑100 (MQ=255) tgGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATaa > 1:2886161/1‑100 (MQ=255) tgGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATaa < 2:318349/100‑1 (MQ=255) gATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAAcg > 1:454568/1‑100 (MQ=255) cAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGaa < 1:1366651/100‑1 (MQ=255) cAGCGACAGTAACCACTTTTAGACGATTTTTCGATGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGaa > 2:303365/1‑100 (MQ=255) gggagaGTAACCACTGTTCTACGTTTTTTCGACAAGATGTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGCATGGCTTTCTGCAATAAcgcg < 2:2291629/91‑1 (MQ=255) gctaCAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGaa < 2:2655359/95‑1 (MQ=255) gCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtc > 2:1125955/1‑100 (MQ=255) cGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACTGGATGGCTTTCTGCAATAACGCGAAtct < 2:649375/100‑1 (MQ=255) aCAGTAACTACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtcttc < 1:1955337/100‑1 (MQ=255) aCAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtcttc < 1:1955120/100‑1 (MQ=255) cAGTAACCACTTTTCGATGCTTTTTCGATTAGAGTTTTACTGGTCATCGCGTGATATTCGCCAGGGACGGGATGACTTTCTGCAATAACGCGAAtcttct < 1:119453/100‑1 (MQ=255) cAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtcttct < 1:1233347/100‑1 (MQ=255) aGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTTGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTtctc < 1:575006/100‑1 (MQ=255) aGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTtctc < 1:2809799/100‑1 (MQ=255) gTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCa > 1:1429696/1‑100 (MQ=255) tAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCaa > 1:853426/1‑100 (MQ=255) aaCCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAAc > 2:928363/1‑100 (MQ=255) aCCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACg > 1:484179/1‑100 (MQ=255) ccACTTTTCGACGCTTTTTCGACGAGAGTTTCACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGt > 1:2415664/1‑100 (MQ=255) ccACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGt > 2:3015838/1‑100 (MQ=255) cACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTa > 1:1880897/1‑100 (MQ=255) aCTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTAt > 1:2038345/1‑100 (MQ=255) aCTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCCTGATATTCGCCAAGTACGAGATAGCTTTATGCAATAACGCGAATCTTCTCAACGTAt > 1:801310/1‑100 (MQ=255) cTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTAtt > 2:969179/1‑100 (MQ=255) cTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTAtt > 1:2214460/1‑100 (MQ=255) tttCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTg < 2:1899246/100‑1 (MQ=255) cGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTa > 1:2792963/1‑99 (MQ=255) cGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGcc > 1:143801/1‑100 (MQ=255) cGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGAAAGGATAGCTTTATGAAATAAAAAGAATATTCTAAACGAAATTGTa > 1:49232/1‑96 (MQ=255) gCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGGTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCa < 1:2473454/100‑1 (MQ=255) gCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCa > 2:2325582/1‑100 (MQ=255) tttCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCATAtt > 1:1688692/1‑100 (MQ=255) ttCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCATATTg < 1:993826/100‑1 (MQ=255) | AAGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCATATTG > NC_000913/4098415‑4098607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |