| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,152,760 | G→T | 100% | N113K (AAC→AAA) | ppc ← | phosphoenolpyruvate carboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,152,760 | 0 | G | T | 97.2% | 337.5 / 1.4 | 106 | N113K (AAC→AAA) | ppc | phosphoenolpyruvate carboxylase |
| Reads supporting (aligned to +/- strand): ref base G (2/1); new base T (53/50); total (55/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.82e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
CGACGGGTAATTTCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGGTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTATTGCTCGGCGGTGTTGGCC > NC_000913/4152665‑4152856 | cgacgGGTAATTTCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTtttt > 1:3032445/1‑100 (MQ=255)cgacgGGTAATTTCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTtttt > 2:2214957/1‑100 (MQ=255)cgacgGGTAATTTCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCAACTGCTTTTTTGCTGGTGTCTTCGCTCAGTTCCGGCTGttt > 2:2321123/1‑98 (MQ=255) acgGGTAATTTCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTc < 1:2923807/100‑1 (MQ=255) acgGGTAATTTCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTc < 2:189469/100‑1 (MQ=255) cgGGTAATTTCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCa > 1:2797707/1‑100 (MQ=255) cgGGTAATTTCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCa > 2:1372502/1‑100 (MQ=255) gggTAATTTCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAg < 1:2833627/100‑1 (MQ=255) ggTAATTTCGGTTGGGTGAGCCGTGATGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGt < 1:393653/100‑1 (MQ=255) tAATTTCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGttt < 1:810/100‑1 (MQ=255) tAATGTGGGTTGGCTGAGCCGTGAGGTTTAGTTCCAGCGACAGCGATTCCTTGGCTTTTTTGCTGTTGTCTTCGTTTAGTTCCGACCTTTTTTTCAGtat < 2:500853/100‑3 (MQ=255) aTTTCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTAc > 1:973723/1‑100 (MQ=255) tttCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACg > 1:1693842/1‑100 (MQ=255) tttCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACg > 1:2263618/1‑100 (MQ=255) ttCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGc < 2:196088/100‑1 (MQ=255) tctgTTGGGTGAGCCGTGAGGACCAGTTCCAGTGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCa < 1:1029547/97‑1 (MQ=255) cGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCa < 2:2900514/99‑1 (MQ=255) ggTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAgg > 1:1834249/1‑100 (MQ=255) ggTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTAATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCATTTTACGCAg > 1:781251/1‑99 (MQ=255) gTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAggg < 2:2038270/100‑1 (MQ=255) ggTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGc > 2:1547032/1‑99 (MQ=255) gTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCgg > 1:575834/1‑100 (MQ=255) gTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCgg < 1:2360668/100‑1 (MQ=255) tGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCggg < 1:290261/100‑1 (MQ=255) gAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCggtc < 1:1220061/100‑3 (MQ=255) aGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCg > 1:52536/1‑100 (MQ=255) cGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATc < 2:499509/100‑1 (MQ=255) gTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATc < 1:260624/99‑1 (MQ=255) gTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCa < 1:751421/100‑1 (MQ=255) ggACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTc > 1:1706073/1‑100 (MQ=255) gACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGCTGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGAGGGCGATCACTTcc > 1:359046/1‑100 (MQ=255) gACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTcc > 2:2981718/1‑100 (MQ=255) ccAGTTCCAGCGACAGCGATTCCACTGCTTTTTTTATTTTTTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCgg > 2:800087/1‑100 (MQ=255) ccAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCgg > 1:2209673/1‑100 (MQ=255) ccAGTTCCAGCGACAGCAATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCgg < 1:543347/100‑1 (MQ=255) cAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCggg < 1:1192161/100‑1 (MQ=255) cAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCggg < 2:1391187/100‑1 (MQ=255) cAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCggg > 2:606331/1‑100 (MQ=255) cAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCggg < 1:1386732/100‑1 (MQ=255) acttCCATCGCCCGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTTCGGCTGTTTTTGCAGTGTAAGCAGGGTTTGGGCGACCACTTc > 2:1399982/3‑95 (MQ=255) gTTCCAGCGACAGCGATTCCACTGCTTTTTTTATTGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGtt > 2:1621936/1‑100 (MQ=255) gTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGAGTGCGGGCGATCACTTCCGGGtt > 1:2542129/1‑100 (MQ=255) gTTCCAGCGACAGCAATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGtt > 2:1020704/1‑100 (MQ=255) ccAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCt < 2:290635/100‑1 (MQ=255) cgacagcgaTTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCa < 1:2552193/100‑1 (MQ=255) acagcgaTTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGc < 2:2599921/100‑1 (MQ=255) cagcgaTTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCt > 1:1954049/1‑100 (MQ=255) agcgaTTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCtt > 1:631550/1‑100 (MQ=255) aTTCCACTGCTTTTTTGATGGTGTCTTCGCTTAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGcc < 1:109409/100‑1 (MQ=255) ttCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCt < 2:2021961/100‑1 (MQ=255) ccACTGCTTTTTTTTTTTTTTTTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTTGCAGCTTCGCCttt > 2:2065750/1‑100 (MQ=255) cACTGCTTTTTTTTTTTTTTTTTCACTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGTTTGCTGGCAGCTTCTCCttt > 2:1108211/1‑99 (MQ=255) cACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCttt < 2:54519/99‑1 (MQ=255) cACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTc > 2:2880546/1‑100 (MQ=255) cACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGGTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTc > 1:13346/1‑100 (MQ=255) aCTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTTTTTTTTTTTATGGTACGGGCGATCACTTGCTGTTTTCTGTCAGCTTCACCttt > 2:1469055/1‑98 (MQ=255) aCTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCg < 1:1021398/100‑1 (MQ=255) cTGCTTTTTTTATTGTTTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCg > 2:1554288/1‑99 (MQ=255) tGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCggn < 1:468865/100‑2 (MQ=255) tGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGc < 1:1979020/100‑1 (MQ=255) tGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGc < 1:592659/100‑1 (MQ=255) tGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGc < 1:2261745/100‑1 (MQ=255) gCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCg > 1:2075942/1‑100 (MQ=255) gCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCg > 1:218944/1‑100 (MQ=255) gCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCg > 1:2544360/1‑100 (MQ=255) gCTTTTTTGATGGTGACTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCg < 2:1372388/100‑1 (MQ=255) cTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTTTTTTTTTTTATAGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCg > 2:2149607/1‑99 (MQ=255) cTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGa > 2:2166329/1‑100 (MQ=255) ttttttGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGaa > 1:549185/1‑100 (MQ=255) tttttGATGGTGTCTTCGCTAAGTTCCAGCTGTTTTTTCAGTTTACGAAGGGTGCGGGCGATCACTTCAGGGTTGCTGGCAGCTTCGCCTTTCAGCGaaa > 2:1490041/1‑100 (MQ=255) tttGATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTTTTTTTTTTTAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGGCTTTCGGCGGAATg > 2:1541927/1‑100 (MQ=255) gATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCtg > 2:2792168/1‑100 (MQ=255) gATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCtg < 1:710325/100‑1 (MQ=255) gATGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCGATAGGCGaagctgac < 1:2053894/100‑7 (MQ=255) gATGGTGTCTTCGATCAGTTCCGACTGTTTTTACAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTAGCAGCTTCGGCTTTCGGCGACATGc > 2:1490933/1‑98 (MQ=255) aTGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCtgt < 1:216747/100‑1 (MQ=255) aTGGTGTCTTCGCTCAGTTCCGGCTGGTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCtgt < 2:13346/100‑1 (MQ=255) tGGTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCtgt < 2:3032412/99‑1 (MQ=255) tGGTGTCTTCGCTCAGTTCCGGCTGTTTTTACAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCAAAATGCtgtg > 2:1993890/1‑100 (MQ=255) ggTGTCTTCGCTCAGTTCCTGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTgg < 1:2497596/100‑1 (MQ=255) ggTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTgg < 1:772434/100‑1 (MQ=255) ggTGTCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTgg < 1:582647/100‑1 (MQ=255) gtgtCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGt < 1:1851456/100‑1 (MQ=255) tgtCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTa > 1:182653/1‑100 (MQ=255) gtCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTAt < 2:333619/100‑1 (MQ=255) tCTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTAtt > 1:1359504/1‑100 (MQ=255) cTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGTTCTTg > 2:1058866/1‑100 (MQ=255) cTTCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTATTg > 1:917058/1‑100 (MQ=255) cTTCGCTCAGTTCCGGCTGGTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTATTg > 2:2263852/1‑100 (MQ=255) ttCGCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTATTGc < 1:281623/100‑1 (MQ=255) gCTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTATTGCTcg > 1:174716/1‑100 (MQ=255) cTCAGTTCCGGCTGTTTTTTCAGTTTACGCAGTGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTATTGCTcgg < 2:2808004/100‑1 (MQ=255) cTCAGTTCCGGCTGTTTTTTATGTTTTCGCAAGGAGCGGGCGATCACTTCCGGATTGCTAGCAGCTTCGACTTTCGGCGAAATGCTGTGatatatct > 2:1855045/1‑93 (MQ=255) cAGTTCCGGCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTATTGCTcggc > 1:576574/1‑99 (MQ=255) gTTCCGGCTGTTTTTTCAGTTTACGCCGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTAGGCGAAATGCTGTGGTATTGCTCGGCGgt > 1:895066/1‑100 (MQ=255) ggCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTATTGCTCGGCGGTGTTg > 2:2248834/1‑99 (MQ=255) gCTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTATTGCTCGGCGGTGTTgg < 1:2620708/99‑1 (MQ=255) cTGTTTTTTCTGTTTATTCAGAGAACGAGCGACCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGTCGCAATTCTTTTGTATTACTCGGCGGttttaacc > 2:2996179/1‑96 (MQ=255) cTGTTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTATTGCTCGGCGGTGTTGGcc > 1:1097824/1‑100 (MQ=255) cTGTTTGTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTATTGCTCGGCGGTGTTGGc < 2:1624745/99‑1 (MQ=255) | CGACGGGTAATTTCGGTTGGGTGAGCCGTGAGGACCAGTTCCAGCGACAGCGATTCCACTGCTTTTTTGATGGTGTCTTCGCTCAGTTCCGGCTGGTTTTTCAGTTTACGCAGGGTGCGGGCGATCACTTCCGGGTTGCTGGCAGCTTCGCCTTTCGGCGAAATGCTGTGGTATTGCTCGGCGGTGTTGGCC > NC_000913/4152665‑4152856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |