| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,177,171 | T→A | 16.8% | intergenic (+43/‑187) | tufB → / → secE | translation elongation factor EF‑Tu 2/preprotein translocase membrane subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,177,171 | 0 | T | A | 16.8% | 223.6 / 40.5 | 102 | intergenic (+43/‑187) | tufB/secE | translation elongation factor EF‑Tu 2/preprotein translocase membrane subunit |
| Reads supporting (aligned to +/- strand): ref base T (40/44); new base A (8/9); total (48/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.14e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
ATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATA > NC_000913/4177072‑4177269 | aTCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGcatcat > 2:860079/1‑100 (MQ=255)aTCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGcatcat < 2:1380713/100‑1 (MQ=255) tCCGTGAAGGCGGCCGTACCGATGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCCATAACATTTGACGCAATGCGCACTAAAAGGGGATCAtt > 2:1891937/1‑100 (MQ=255) ccGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGATCTAATTGCTGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAttt > 2:538049/1‑100 (MQ=255) tGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGAt > 1:2123902/1‑100 (MQ=255) gAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATg < 2:1159842/100‑1 (MQ=255) aaGGCGGCCGTACCGTTGGCTCGGGCTTTGTATGAAAAGTTCTTAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATg < 1:1307333/99‑1 (MQ=38) aaGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGc < 1:745795/100‑1 (MQ=255) aaGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGc < 1:2209952/100‑1 (MQ=255) aaGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATACACACTAAAAAGGCATAAtttaa > 1:113997/1‑95 (MQ=25) ggcggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCTGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGccc > 2:1745712/1‑100 (MQ=255) ggcggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGccc < 2:402532/100‑1 (MQ=255) ggcggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGccc < 1:1982361/100‑1 (MQ=255) cggcCGTACCGTTGGCGCGGGCGTTGTATCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCt < 1:532631/99‑1 (MQ=38) cggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCtt > 1:2011046/1‑100 (MQ=255) cggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtt < 2:1698944/100‑1 (MQ=255) gcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTTAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtttt < 1:141557/100‑1 (MQ=38) gcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCtttt > 2:2479837/1‑100 (MQ=255) gcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtttt < 2:1098974/100‑1 (MQ=255) ccGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCttttt < 2:1247723/100‑1 (MQ=255) tACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttagtg < 1:1091939/100‑5 (MQ=38) atcGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAAGTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttagtgc < 1:2092610/98‑6 (MQ=38) aCCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCAc < 2:1456909/100‑1 (MQ=255) ccGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACg < 2:67504/100‑1 (MQ=255) ccGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACg < 2:1626822/100‑1 (MQ=255) gTTGGCGCGGGTGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttagtgcgca < 1:2729166/100‑9 (MQ=37) gTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCt < 1:2374017/100‑1 (MQ=255) ggCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTc < 1:2032622/100‑1 (MQ=255) cgcgGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCttt > 2:1772705/1‑97 (MQ=255) cgcgGGCGGTGTAGCAAAAGTTCTGAGCTAATTGCGGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGt > 2:2121008/1‑100 (MQ=255) gcgGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGt > 2:1063779/1‑99 (MQ=255) cgGGCGTTGTAGCAAAAGTTATGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGAGCATCATTTGATGCCATTTTTGCACGCTTTCGTAc < 2:2538894/100‑1 (MQ=255) gCGTTGTAGCAAAAGTTCTGAGATAATTGCCGATAACATTTGACGCAATGCGAACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGt < 2:216032/95‑1 (MQ=255) tGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCTCTTTTTGCACGCTTTCGTACCAGAAcc < 2:113996/100‑1 (MQ=255) tGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAAcc < 1:652061/100‑1 (MQ=255) aGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTgg > 1:2681470/1‑100 (MQ=255) aGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTgg > 2:2961892/1‑100 (MQ=255) aGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTgg > 2:2397126/1‑100 (MQ=255) aGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATAATTTGATACCCTTTTTGCACGCTTTCGTACCAGAACCTg > 1:1081649/1‑99 (MQ=255) tcttccgatCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGc < 2:2546236/92‑1 (MQ=255) gCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGc < 1:1453245/100‑1 (MQ=255) gCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGc < 1:1881887/100‑1 (MQ=255) gCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGc < 2:866223/100‑1 (MQ=255) gCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGc > 2:2210291/1‑100 (MQ=255) gCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGAGCACTAAAAGTGAATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAAcc > 2:871956/1‑96 (MQ=255) cAAAAGTTCTGAGCTAATTGCCGATAACATTTGTAGCAATGCGCACTAAAAAGGCATCATTTGATGCCCTTTTTGCACGCCTTCGTACCAGAACCTCGCt > 2:1977468/1‑100 (MQ=255) cAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCt > 2:1602056/1‑100 (MQ=255) cAAAAGTTCTGAGCTAATTGCAGATAACATTTGACGCAATGCGCGCTAAAAGGGCATCATTTGATGCTCATGTTGCACGCTGTCGTACGAGAACCTgg > 2:2639686/1‑98 (MQ=255) tccgatctgCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCtcatc < 2:1170604/92‑1 (MQ=255) gTTCTGATCTAATTGCCGATAACATTTGACGCAATGCGCACTGAAAGCGCATCATTTGATGCTCTTTTTGCACGCTTTCGTACCAGAACCTGGCtcagc < 2:775547/99‑3 (MQ=255) ttCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAg < 2:1629446/100‑1 (MQ=255) cTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTg > 2:2074728/1‑100 (MQ=255) gCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAgatcgga > 1:1170615/1‑94 (MQ=255) gCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGAttt < 2:1024789/100‑1 (MQ=255) cTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGAtttt > 1:2325112/1‑100 (MQ=255) ttGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCttt < 1:2357043/100‑1 (MQ=255) tGCTGATATCATTTGACGTAATGCGCACTAAAAGTGTATCATTTGATGTTCTTTTTGTACGCTTTCGTACCAGAACTTGGCTCATCAGTGATTTTCTTTg < 2:1627486/100‑1 (MQ=255) tGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTg > 1:982556/1‑100 (MQ=255) gCCGATAACATTTGACGCAATGCGCACTAAAAGTGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTTTCTCATCAGTGATTATCTTTg > 1:1329641/1‑99 (MQ=255) gCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGt > 2:1245876/1‑100 (MQ=255) gCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGt > 2:1941426/1‑100 (MQ=255) ccGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTc < 2:2325086/100‑1 (MQ=255) ccGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTc > 2:1997725/1‑100 (MQ=255) cGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCa < 2:2647986/100‑1 (MQ=255) cGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGATCATCAGTGATTTTCTTTGTCa > 2:829334/1‑100 (MQ=255) tAACATTTGACGTAATGCGCACTAAAAAGACATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAATCTAGCTCATCAGTGATTTTCTTTGTCATa > 2:748549/1‑99 (MQ=255) aaCATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTAACAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAAt > 2:1743461/1‑100 (MQ=255) aCATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATc > 1:2292884/1‑100 (MQ=255) ttggACGCAATGCTCACTAACAGGGCATCAGTTGATGCTCTTTTTTCATGTTTTCGGACCAGAACCTGGTTCATCAGTGATTTTCTTTGTCATAATCAtt < 2:1010760/97‑1 (MQ=255) gACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCt > 1:3028223/1‑100 (MQ=255) aCGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGTCTCATCAGTGATTTTCTTTGTCATAATCATTGCTg < 2:2996949/100‑1 (MQ=255) cGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCAAGCTTTCGTACCAGAAACTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTga > 1:1530011/1‑100 (MQ=255) agCAATGCGCACTAAAAAAACATCATTTGATGCCATTTTTGCACGCTTTCGTACCAGAACCTGGCTAATCAGTGATTTTCTTTGTCATAATCATTGCTga > 2:1296120/2‑100 (MQ=255) gttattctcgcTAAAAGGTTATCATTTGATGCCCTGTTTTCACGCTTGCGTACCAGACCCTTTTTCATCAGTGATTTTCTTTGTCATAATCAGTGCTgag < 2:1803328/90‑1 (MQ=255) gCAATGCGCACTAAAAGGGTATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTga < 1:1745732/99‑1 (MQ=255) gCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTgag < 2:2823026/100‑1 (MQ=255) aaagcgtgcaaaaaGGGCATCAAATGATGCCCTTTTAGTGCGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGAc > 2:50479/11‑100 (MQ=18) tGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAg > 2:371031/1‑100 (MQ=255) tGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAg > 1:138641/1‑100 (MQ=255) gcgcACTAAAAGGGCATCATTTGATGTCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAgg < 1:747654/100‑1 (MQ=255) ctcACTAATAGGGTATCATTTGATGCCCTTTTTGTTCGTTTTCGTACTATAACCTGTGTCATAAGTGATTGTCTTTTTCATAATCATTGCTga < 2:2867413/91‑1 (MQ=255) cgtgcacacaGGGCATCAAATGATGACCTTTTTGCACGCTTTCGTACCAGAACCAGGCTCAAAAGTGATTCTCTTTGTCATAATCATTGCTga > 2:14289/10‑93 (MQ=255) gcACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAgg < 2:3044939/98‑1 (MQ=255) gcACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGc > 1:1200032/1‑99 (MQ=255) aCTAAAAGGGCATCATTGTATGCCCTTTTTGTACGCTTTCGTACCAGAACCTGGCGCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGctc < 2:2442296/99‑1 (MQ=255) caaaaaGGGCATCAAATGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAAGctct > 1:2242441/3‑99 (MQ=38) cTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTg > 1:2656400/1‑100 (MQ=255) aaaaaGGGCATCAAATGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGt > 2:1808330/2‑100 (MQ=255) aaaaGGGCATCAAATGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGtt > 2:1245886/1‑100 (MQ=255) aaaGGGCATCATTTGATGCCCTTTTTTTTTTTTTTTGTACCAGAACCTGGCTCATCAGTGTTTTTCTTTGTCATAATCATTGCTTAGACAGGCTCTGtt > 2:930223/1‑99 (MQ=255) aaaGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTg < 2:646425/100‑1 (MQ=255) aaGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGa < 1:1263939/100‑1 (MQ=255) aaGGGCATCAAATGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGa > 1:1246750/1‑100 (MQ=255) aaGGGCATCAAATGATGCCCTTTTTGAACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGa > 2:705957/1‑100 (MQ=255) aGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAg < 1:2479866/100‑1 (MQ=255) atcatTTGATGCCCTTTTTGCACGCTTTCTTATCAGAACCTGGTTCATCAGTAATTTTCTTTGTGATTATCATTGCTTAGATATGCTGTGTTGAGGGCg < 2:2451468/99‑1 (MQ=255) tcatTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGta < 1:2599098/100‑1 (MQ=255) catTTGATGCCCTTTTTGCACGCTTTCGTACCAGTTCCTGGCTCATCAGTGATTTTCTTTGTCATAATCATGGCTGAGACAGGCTCTGTTGAGGGCGtat < 1:192186/100‑1 (MQ=255) catTTGATGCCCTTTTTGCACGCTTTCGTACCAGATCCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGtat < 1:1772725/100‑1 (MQ=255) atTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGtata > 2:189089/1‑100 (MQ=255) | ATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATA > NC_000913/4177072‑4177269 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |