BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	1,017,296	A→C	100%	I335S (ATC→AGC)	ycbZ ←	putative peptidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,017,296	0	A	C	100.0%	415.1 / ‑6.7	123	I335S (ATC→AGC)	ycbZ	putative peptidase
Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (62/60); total (63/60)

Only 100 of 125 total aligned reads displayed.

AAAAGCGCGTGGATGACCCGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGATCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGGAGAAGGTGTCGCCATCAC  >  NC_000913/1017199‑1017392

aaaaGCGCGTGGATGACCCGGAAATTCAATGATCGAAAGGGCGTGAATTTGCCCGATGCGGTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCtc                                                                                                <  2:744881/100‑1 (MQ=255)

aaaaGCGCGTGGATGACCCGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCtc                                                                                                >  1:1794228/1‑100 (MQ=255)

aaaaGCGCGTGGATGACCCGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCtc                                                                                                <  2:2867986/100‑1 (MQ=255)

 aaaGCGCGTGGATGACCCGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGctct                                                                                               <  1:120551/100‑1 (MQ=255)

        gTGGATGACCCGGAAATTAAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTg                                                                                        >  2:2254383/1‑100 (MQ=255)

          ggATGACCCGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCa                                                                                      <  1:2235233/100‑1 (MQ=255)

          ggATGACCCGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCa                                                                                      >  1:938339/1‑100 (MQ=255)

           gATGACCCGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCAt                                                                                     <  1:1489338/100‑1 (MQ=255)

            aTGACCCGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATa                                                                                    <  2:1474171/100‑1 (MQ=255)

            aTGACCCGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATa                                                                                    <  2:1601453/100‑1 (MQ=255)

               aCCCGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGt                                                                                 >  1:2154696/1‑100 (MQ=255)

               aCCCGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGt                                                                                 >  1:694057/1‑100 (MQ=255)

                cccGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGtt                                                                                <  2:1182496/100‑1 (MQ=255)

                 ccGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGtt                                                                                <  2:2842254/99‑1 (MQ=255)

                 ccGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTc                                                                               <  2:1406165/100‑1 (MQ=255)

                 ccGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAAACAGAATTTGCTCCTGAAGGCTCTCATCCTGCATACGtt                                                                                >  1:369895/1‑99 (MQ=255)

                   ggAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCan                                                                             <  1:526103/100‑2 (MQ=255)

                   ggAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAg                                                                             >  2:1776692/1‑100 (MQ=255)

                   ggAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTAGCTCCTGAAAGCTCTCATCCTGCATACGTTCAg                                                                             >  1:1060385/1‑100 (MQ=255)

                      aaTTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGa                                                                          >  1:2860236/1‑100 (MQ=255)

                       aTTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAg                                                                         <  1:802378/100‑1 (MQ=255)

                       aTTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAg                                                                         >  1:1143026/1‑100 (MQ=255)

                       aTTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGACTCTCAACCTGCATACGTTCAGCGAg                                                                         >  1:335748/1‑100 (MQ=255)

                        ttCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAgg                                                                        <  1:883491/100‑1 (MQ=255)

                          cAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGaa                                                                      >  1:2174962/1‑100 (MQ=255)

                          cAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGaa                                                                      >  1:2713656/1‑100 (MQ=255)

                           aaTGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGaaa                                                                     >  2:2655693/1‑100 (MQ=255)

                             tGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAAcc                                                                   >  1:2261714/1‑100 (MQ=255)

                             tGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAAcc                                                                   <  2:2357900/100‑1 (MQ=255)

                              gACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCt                                                                  <  2:721353/100‑1 (MQ=255)

                                ccGAAAGGGCGTTAATTTGCCCGATGCTTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTc                                                                <  1:767076/100‑1 (MQ=255)

                                ccGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTc                                                                >  1:2319418/1‑100 (MQ=255)

                                ccGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTc                                                                >  2:251758/1‑100 (MQ=255)

                                ccGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTc                                                                >  2:251759/1‑100 (MQ=255)

                                ccGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGATCTAATCCTGCATACGTTCAGCGAGGAAACCTTc                                                                >  1:932392/1‑100 (MQ=255)

                                  gAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTcgc                                                              <  2:950386/100‑1 (MQ=255)

                                  gAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTcgc                                                              >  1:1283203/1‑100 (MQ=255)

                                   aaaGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTcgcg                                                             <  1:172667/100‑1 (MQ=255)

                                     aGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGcc                                                           <  1:2179906/100‑1 (MQ=255)

                                       ggCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCAt                                                         >  2:1420578/1‑100 (MQ=255)

                                          gTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCa                                                      >  1:596896/1‑100 (MQ=255)

                                          gTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCa                                                      >  2:1732837/1‑100 (MQ=255)

                                           ttAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCAc                                                     <  2:2115308/100‑1 (MQ=255)

                                           ttAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATGTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCAc                                                     <  2:1277050/100‑1 (MQ=255)

                                             aaTTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACgc                                                   <  2:1928053/100‑1 (MQ=255)

                                             aaTTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACgc                                                   >  1:1829486/1‑100 (MQ=255)

                                             aaTTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACgc                                                   <  1:1784598/100‑1 (MQ=255)

                                             aaTTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACgc                                                   >  1:2259614/1‑100 (MQ=255)

                                              aTTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACgct                                                  <  2:1315867/100‑1 (MQ=255)

                                                ttGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTTCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACgctgc                                                <  1:1834031/100‑1 (MQ=255)

                                                ttGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACgctgc                                                <  1:1958647/100‑1 (MQ=255)

                                                ttGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACgctgc                                                <  2:1652393/100‑1 (MQ=255)

                                                ttGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACgctgc                                                <  1:32335/100‑1 (MQ=255)

                                                  gCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGctgctg                                              >  1:2922032/1‑100 (MQ=255)

                                                  gCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGctgctg                                              >  1:294281/1‑100 (MQ=255)

                                                    ccGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTgca                                            >  1:918287/1‑100 (MQ=255)

                                                    ccGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTgca                                            >  2:2369328/1‑100 (MQ=255)

                                                     cGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTgcag                                           <  1:362542/100‑1 (MQ=255)

                                                     cGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTgcag                                           <  1:2687817/100‑1 (MQ=255)

                                                      gATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTgcagc                                          >  1:2522724/1‑100 (MQ=255)

                                                        tGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCAt                                        >  2:2374256/1‑100 (MQ=255)

                                                        tGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTGCGCGCCATTCACGCTGCTGCAGCAt                                        <  1:1047069/100‑1 (MQ=255)

                                                          cGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTa                                      <  2:1129960/100‑1 (MQ=255)

                                                            ttCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAg                                    <  2:2592531/100‑1 (MQ=255)

                                                            ttCGCCGTCGGTTTCAATCAGGATTTGCTCCTGAATGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAg                                    <  1:2411713/100‑1 (MQ=255)

                                                             tCGCCTTTGGTTTTAATCAGGATTTGTTCTTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGt                                   <  1:2030496/100‑1 (MQ=255)

                                                              cGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGtt                                  >  2:1788966/1‑100 (MQ=255)

                                                               gCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGttt                                 <  2:1178885/100‑1 (MQ=255)

                                                                  ttCGGTTTCAATCAGGATTTGCTCCTTAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAgc                              <  2:2574348/100‑1 (MQ=255)

                                                                  ttCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAgc                              <  2:294278/100‑1 (MQ=255)

                                                                  ttCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGAATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAgc                              <  1:261971/100‑1 (MQ=255)

                                                                   tCGGTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAgct                             <  1:243576/100‑1 (MQ=255)

                                                                     ggTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGCGGAACCCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAgctgc                           <  2:1807784/100‑1 (MQ=255)

                                                                      gTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAgctgct                          >  2:2026846/1‑100 (MQ=255)

                                                                      gTTTCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAgctgct                          <  1:692517/100‑1 (MQ=255)

                                                                       tttCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGtgaggcttcgc                         >  2:2882417/1‑90 (MQ=255)

                                                                        ttCAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCg                        >  1:1884888/1‑100 (MQ=255)

                                                                          naaTCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTAGCGCCATTCACGCAACTGCAGCATTAAGTTTAGCTGCTCGcc                      >  1:812013/2‑100 (MQ=255)

                                                                          cAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGcc                      >  2:2391020/1‑100 (MQ=255)

                                                                          cAATCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGcc                      >  2:2396689/1‑100 (MQ=255)

                                                                            aTCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCgg                    >  1:2960097/1‑100 (MQ=255)

                                                                            aTCAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCgg                    >  2:271498/1‑100 (MQ=255)

                                                                              cAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGgag                  <  2:542587/100‑1 (MQ=255)

                                                                              cAGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATACACGCTGCTGCAGCATTAAGTTTAGCTGCTCGcc                      >  2:547681/1‑96 (MQ=255)

                                                                               aGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGgaga                 >  2:517410/1‑100 (MQ=255)

                                                                               aGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGgaga                 <  1:1334973/100‑1 (MQ=255)

                                                                               aGGATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCAATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGgag                  >  2:298794/1‑99 (MQ=255)

                                                                                ggATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTTCTCCAGCATTAAGTTTAGCTGCTCGCCGGAGaa                <  2:1992710/100‑1 (MQ=255)

                                                                                 gATTTGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGGAGAAg               <  2:1560410/100‑1 (MQ=255)

                                                                                   tttGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGGAGAAGgt             <  2:2320299/100‑1 (MQ=255)

                                                                                    ttGCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGGAGAAGgtg            <  2:244513/100‑1 (MQ=255)

                                                                                      gCTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGGAGAAGGTGTc          <  2:2840530/100‑1 (MQ=255)

                                                                                       cTCCTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGGAGAAGGTGTCg         >  2:790374/1‑100 (MQ=255)

                                                                                         ccTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTCGCTGCTCGCCGGCGAAGGTGACGcc       >  1:1001888/1‑100 (MQ=255)

                                                                                         ccTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGGAGAAGGTGTCGcc       >  2:458492/1‑100 (MQ=255)

                                                                                         ccTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGGAGAAGGTGTCGcc       <  2:1492498/100‑1 (MQ=255)

                                                                                         ccTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGGAGAAGGTGTCGcc       >  1:1032930/1‑100 (MQ=255)

                                                                                         ccTGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGGAGAAGGTGTCGcc       <  1:3013095/100‑1 (MQ=255)

                                                                                         ccTGAAGCCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGGAGAAGGTGTCGc        <  2:1686179/99‑1 (MQ=255)

                                                                                           tGAAGGCTCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGGAGAAGGTGTCGCCAt     >  1:226124/1‑100 (MQ=255)

AAAAGCGCGTGGATGACCCGGAAATTCAATGACCGAAAGGGCGTTAATTTGCCCGATGCGTTCGCCTTCGGTTTCAATCAGGATTTGCTCCTGAAGGATCTCATCCTGCATACGTTCAGCGAGGAAACCTTCGCGCCATTCACGCTGCTGCAGCATTAAGTTTAGCTGCTCGCCGGAGAAGGTGTCGCCATCAC  >  NC_000913/1017199‑1017392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`