| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,036,103 | C→T | 16.0% | H112Y (CAT→TAT) | hyaD → | hydrogenase 1 maturation protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,036,103 | 0 | C | T | 16.0% | 293.7 / 39.9 | 128 | H112Y (CAT→TAT) | hyaD | hydrogenase 1 maturation protease |
| Reads supporting (aligned to +/- strand): ref base C (59/48); new base T (13/8); total (72/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.17e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
TGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGCCCGCTG > NC_000913/1036006‑1036202 | tGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACAt > 2:2146910/1‑100 (MQ=255) ctggAGAACGCATTCCGGCTTATCTCAGCGCGAAGAATATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGTGCTGCCGGATATACGTGGACATc < 2:2697499/97‑1 (MQ=255) ccGGAGAACGCATTCCGGCTTATCTCAGCGGGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCt > 2:78431/1‑100 (MQ=255) ccGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCt > 1:2150444/1‑100 (MQ=255) cGGAGAACGCATTCCGGCTTATCTCATCGCGAAGAAAATGAGCTTGCATCAGAACAGTTTCTCCGAAGTGTTTGCGCTGGCGGATATCCGCGGACATCTg < 2:1311631/100‑1 (MQ=255) cGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTg < 2:2934427/100‑1 (MQ=255) cGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTg < 1:106842/100‑1 (MQ=255) cGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTg > 1:2643566/1‑100 (MQ=255) gagaACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGcc > 1:2724884/1‑100 (MQ=255) gagcGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGcct < 2:1417335/96‑2 (MQ=255) aaCGCATTCCGGCTTATCTCTGCGCTAATAATATGATTCTTCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGc < 1:762401/100‑1 (MQ=255) aaCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGTATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAg < 1:808277/99‑1 (MQ=255) aaCGCATTCCGGCTTATATCATTGCGAAGAAATTGTGCGTGCATCAGAACAGTTTCGCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATc < 1:142490/93‑1 (MQ=255) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTACCAGca > 1:628479/1‑100 (MQ=255) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcg < 1:2433246/100‑2 (MQ=38) aCGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGACGCTGGCGGATATCCGCGGACATCTGCCAGca > 1:1133784/1‑100 (MQ=255) cGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGcac < 2:1405051/100‑1 (MQ=255) cGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcgc < 2:2216921/100‑3 (MQ=37) gCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGcaca < 1:1299754/100‑1 (MQ=255) cATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACat > 1:1753957/1‑100 (MQ=255) cATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACat > 1:2177803/1‑100 (MQ=255) cATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCAGATGTCCGCGGATATCCGCCAGcgcca < 1:1762126/100‑5 (MQ=37) aTTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGGAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACata < 1:1079239/100‑1 (MQ=255) ttCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACatat > 2:1537337/1‑100 (MQ=255) ccGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATAtt > 1:2574912/1‑99 (MQ=255) ccGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTg < 1:2910688/100‑1 (MQ=255) ggCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTgt > 2:716780/1‑98 (MQ=255) ggCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGcc < 2:2585984/100‑1 (MQ=255) nttATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTACCCt > 2:1359774/2‑100 (MQ=255) cTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGccc < 1:2992193/99‑1 (MQ=255) aTCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgt > 2:1191562/1‑100 (MQ=255) aTCTCAGCCCTAATAAAATGAGCTTCCATCATAACAGTTTCTCCTAAGTGTTTGCTCTGGCTTTTATCCGCGGACATCTGCCAGcac < 2:185682/87‑1 (MQ=255) tctcATCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgtc < 2:2602409/100‑1 (MQ=255) tctcAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgt > 1:2363032/1‑99 (MQ=255) ctcAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgtcg < 2:1124772/100‑1 (MQ=255) ctcAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGACGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCtcgtcg > 1:109057/1‑100 (MQ=255) aGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTc > 2:879061/1‑100 (MQ=255) cgcgAAGAAAATAAGCCTGCATCAGAACAGTTTCGACGAAGTGTTGGCGCTGGCGGAAAACCGCGGACATCTGCCAGCACATATTGCGCgcgtacgt > 2:2136095/1‑93 (MQ=255) gcgAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTc < 2:558907/97‑1 (MQ=255) cgAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCa > 2:2383770/1‑100 (MQ=255) gaagaaAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCaa > 1:371236/1‑100 (MQ=255) gaagaaAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCaa > 1:1493817/1‑100 (MQ=255) agaaAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGTACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCa < 1:2142153/97‑1 (MQ=255) gaaAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAAccc > 2:1186883/1‑100 (MQ=255) aaTGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCa < 1:1901039/100‑1 (MQ=255) tGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAAt < 1:1819067/100‑1 (MQ=255) ngCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATATGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATg > 2:1325470/2‑99 (MQ=255) gCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGTATATCCGCGGATATCTGCCAGCACATATTGCCCTCGTTGGTCTGCAACCCGCAATGCt < 2:477649/100‑1 (MQ=255) gCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCt > 1:607959/1‑100 (MQ=255) ccTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTc > 2:1676856/1‑100 (MQ=255) ccTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTc < 1:2383797/100‑1 (MQ=255) cTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcg > 1:2754203/1‑100 (MQ=255) tGCATCAGAACTGTTTCTCCGAAGTGTTGGCGCTTGCGGATATCCGCGGACATCTGCCAGCACATATTACACTCATCGGTCTGCAACCCGCAATGcacaa > 2:2338003/1‑96 (MQ=255) tGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcga > 2:1701231/1‑100 (MQ=255) gCATCAGAACAGTTTCTCCTATGTGTTGGCGCTGGTGGATATCCGCGGACATCTGCCAGCACATATGGCCCTCGTCGGTCTGCAACCCGCAATGCTcgac < 1:538448/100‑1 (MQ=255) gCATCAGAACAGTTTCTCCGAAGTGTTGGCGTTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcgac < 1:406306/100‑1 (MQ=255) gCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcgac < 2:2099303/100‑1 (MQ=255) cATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATCTCCGCGCACATCTCCCAGAACATATTACCCTCGTCAAACTACAACCCGCAATGCTcgacg > 1:1109401/1‑100 (MQ=255) tCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTcgacg < 1:1185966/98‑1 (MQ=255) cAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTAcggc < 1:1512615/100‑1 (MQ=255) cAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTAcggc > 1:2239321/1‑100 (MQ=255) gTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTAcggcgg < 2:2302920/100‑1 (MQ=255) gTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTAcggcgg > 1:1525869/1‑100 (MQ=255) gTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTAcggcgg < 1:1325482/100‑1 (MQ=255) gTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTAcggcag > 2:1838415/1‑98 (MQ=255) tttCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACAACTACGGCGGt > 1:275792/1‑100 (MQ=255) ttCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTa > 2:928676/1‑100 (MQ=255) ttCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATAATGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTa > 1:2508693/1‑100 (MQ=255) ccGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCACTGCTCGACGACTACGGCGGTAGCCt > 2:2690042/1‑100 (MQ=255) ccGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGcc > 1:647551/1‑99 (MQ=255) ccGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGATCTACAACCCGCAATGCTCGACGACTACGGCGGTAGCCt > 1:2346383/1‑100 (MQ=255) cGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTg < 2:1570797/100‑1 (MQ=255) cGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTg < 2:2643534/100‑1 (MQ=255) gAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTg > 2:626451/1‑99 (MQ=255) aGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGTTCGACGACTACGGCGGTAGCCTGAGc < 1:1849240/100‑1 (MQ=255) aatatgtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGa > 2:1694902/8‑100 (MQ=25) tatgtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGaa > 2:1928994/6‑99 (MQ=37) atgtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACt > 2:2894216/5‑100 (MQ=37) atgtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACt > 1:2931226/5‑100 (MQ=37) atgtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCACAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACt > 1:504373/5‑100 (MQ=25) ggCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCACAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTg > 1:320379/1‑100 (MQ=255) gtgcTGGGAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTgg > 1:1581671/3‑100 (MQ=37) gtgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGATAGACGACTACGGCGGTAGCCTGAGCGAACTgg > 1:2381660/3‑100 (MQ=25) tgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACt > 1:889218/2‑97 (MQ=37) tgcTGGCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGc > 2:620757/2‑100 (MQ=38) tGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACg > 1:219901/1‑100 (MQ=255) ggCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACgg > 1:2821524/1‑100 (MQ=255) ggCAGATGTCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACgg > 2:2019333/1‑100 (MQ=38) cGGATTTCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGTTCTGCAACCCGCACTGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACgg < 2:623093/98‑1 (MQ=255) agatgtCCGCGGATATCCGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAg < 1:2019356/95‑1 (MQ=255) atCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAAc > 1:282329/1‑100 (MQ=255) ccGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACt > 2:757911/1‑99 (MQ=255) ccGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTg > 2:2673382/1‑100 (MQ=255) ccGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTg > 1:2397755/1‑100 (MQ=255) cgcgGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGc < 1:84833/100‑1 (MQ=255) cgGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGccc < 2:2724852/100‑1 (MQ=255) cgGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGccc > 1:1315841/1‑100 (MQ=255) cgGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGcc > 1:705246/1‑99 (MQ=255) ggACATCTGCCAGCACATATTGCCCTTGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGccc < 1:1163041/99‑1 (MQ=255) gACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGCCCGc < 2:2884462/100‑1 (MQ=255) | TGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGCCCGCTG > NC_000913/1036006‑1036202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |