BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	1,197,739	A→G	100%	S167P (TCC→CCC)	ymfE ←	e14 prophage; putative inner membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,197,739	0	A	G	100.0%	353.7 / ‑6.7	113	S167P (TCC→CCC)	ymfE	e14 prophage; putative inner membrane protein
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (57/53); minor base T (0/2); total (58/55)

Only 100 of 123 total aligned reads displayed.

TGAGAATGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGAAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAATTTTTCTTAC  >  NC_000913/1197644‑1197835

tGAGAATGATAAAATTACAAAAAAGAATAAAGACAGCAAATAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAAt                                                                                               <  1:172790/99‑1 (MQ=255)

tGAGAATGATAAAATTACAAAAAAGAATAAAAACAGCAAAGAACCTTCTACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAAtt                                                                                              <  2:631071/100‑1 (MQ=255)

 gagaATGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTa                                                                                             >  1:1323903/1‑100 (MQ=255)

     aTGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGc                                                                                         <  1:2706741/100‑1 (MQ=255)

       gATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCaa                                                                                       >  1:1597541/1‑100 (MQ=255)

        aTAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAAt                                                                                      <  1:429679/100‑1 (MQ=255)

        aTAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAAGGAATTAATGCAAt                                                                                      >  1:1301979/1‑100 (MQ=255)

          aaaaTTACAAAAAAGAATAAAGACAGCAAAGAACCTACAACATGAAAAATATACATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTa                                                                                    >  2:2630316/1‑100 (MQ=255)

                aCAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGaaa                                                                              >  1:2779486/1‑100 (MQ=255)

                 cAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGaaaa                                                                             >  1:2682313/1‑100 (MQ=255)

                 cAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGaaaa                                                                             >  1:1409689/1‑100 (MQ=255)

                 cAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGaaaa                                                                             >  2:1621497/1‑100 (MQ=255)

                  aaaaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGaaaa                                                                             >  2:1848144/1‑99 (MQ=255)

                  aaaaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAAt                                                                            <  1:1837672/100‑1 (MQ=255)

                  aaaaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAAt                                                                            >  1:1644888/1‑100 (MQ=255)

                   aaaaaGAATGAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATACTTAGGAAGGGAATTAATGCAATTATCGAAAAtt                                                                           >  2:1320587/1‑100 (MQ=255)

                   aaaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAAtt                                                                           >  1:1927534/1‑100 (MQ=255)

                   aaaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAAtt                                                                           >  1:2864760/1‑100 (MQ=255)

                   aaaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGAGAATTAATGAAATTATCGAAAAt                                                                            >  1:1455645/1‑99 (MQ=255)

                    aaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTc                                                                          <  1:2082694/100‑1 (MQ=255)

                     aaaGAATAAAGACAGCAAAGAACCTTCAACATAAAAAATATCCATTTGTTTGCAAACAAATATTATTAGGAAGGGAATTAATGCAAATATCGAAAATTCa                                                                         >  1:2890746/1‑100 (MQ=255)

                          aTAAAGACAGCAAAGAACCTTCAACATGCAAAATATCCATTTGTTTGCAAACAAAGATTATTAGGAAGGCAATAAATGCAACTATCGAAAACTCaaaca                                                                     >  2:2361928/1‑97 (MQ=255)

                           tAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAat                                                                   >  1:2067902/1‑100 (MQ=255)

                            aaaGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAata                                                                  >  1:2896162/1‑100 (MQ=255)

                             aaGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAatat                                                                 >  2:1097599/1‑100 (MQ=255)

                             aaGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAatat                                                                 >  1:2715080/1‑100 (MQ=255)

                             aaGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAatat                                                                 >  1:2760856/1‑100 (MQ=255)

                               gataGCAAAGAACCTTCAACATTAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAAGTAATGCAATTATCGAAAATTCAAAAAATATc                                                                <  1:633041/96‑1 (MQ=255)

                               gACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATcc                                                               >  2:2189764/1‑100 (MQ=255)

                               gACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGAAAAAAAAGATTATTAGGAAGGGAATTAATTCAATTATCGAAAATTCAAAAAATATcc                                                               <  2:735794/100‑1 (MQ=255)

                               gACAGCAAAGAACATTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATcc                                                               <  2:2896130/100‑1 (MQ=255)

                                 cAGCAAAGAACCTTCAACATTAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAACGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCa                                                              <  2:1873474/99‑1 (MQ=255)

                                 cAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCaa                                                             >  2:1634957/1‑100 (MQ=255)

                                   gCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCaaaa                                                           >  2:1286988/1‑100 (MQ=255)

                                     aaaGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAAt                                                         <  1:2293687/100‑1 (MQ=255)

                                     aaaGAACCTTCAACATGAAAAATATCCATTTGTTTGAAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAAt                                                         <  1:137407/100‑1 (MQ=255)

                                      aaGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATa                                                        >  1:1551699/1‑100 (MQ=255)

                                       aGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAg                                                       <  1:906312/100‑1 (MQ=255)

                                       aGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAg                                                       <  1:2548818/100‑1 (MQ=255)

                                       aGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAg                                                       <  1:841650/100‑1 (MQ=255)

                                       aGAACCTTAAACATGAAAAATATCCATTTGTTTACAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAg                                                       <  2:955286/100‑1 (MQ=255)

                                        gAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGt                                                      >  1:2337474/1‑100 (MQ=255)

                                          aCCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGtat                                                    >  1:2453118/1‑100 (MQ=255)

                                          aCCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAAAAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCAAAAAATAGta                                                     >  2:2633890/1‑99 (MQ=255)

                                            cTTCAACATGAAAAATATCCAAAAAAAAAAAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATAc                                                  <  2:2384973/100‑1 (MQ=255)

                                             ttCAACATGAAAAATATTCGTTTGTTTGCAAAATAAGATTATTAGGAAGGGAATTAATGCAATTAGCGAAAATTCAAAAAATATCCAAAAATAGTATACt                                                 <  1:994195/100‑1 (MQ=255)

                                                aaCATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTa                                              <  1:2586502/100‑1 (MQ=255)

                                                 aCATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTAAAAAAAAAAAAAAAAATATCCAAAAATAGTATACTTTAt                                             <  2:354753/100‑1 (MQ=255)

                                                   aTGAAAAATATCCGTTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATACAAAAATAGTATACTTTAtt                                            <  2:2067879/99‑1 (MQ=255)

                                                   aTGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGTAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTc                                           <  1:2555587/100‑1 (MQ=255)

                                                    tGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTcc                                          <  1:1595269/100‑1 (MQ=255)

                                                    tGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTcc                                          <  1:2602510/100‑1 (MQ=255)

                                                    tGAAAAATAGCCATTTGATTGCAAAAAAAGATTATTACGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATAAAAAAATAGTATACTTTATTcc                                          <  2:2771599/100‑1 (MQ=255)

                                                     gAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCa                                         >  2:1252178/1‑100 (MQ=255)

                                                      aaaaaTATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGTAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTcc                                          <  2:402874/98‑1 (MQ=255)

                                                      aaaaaTATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATAGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCag                                        >  1:493691/1‑100 (MQ=255)

                                                       aaaaTATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCAAAAAAAAAAAAAATATCCAAAAATAGTATACTTTATTCCaga                                       <  2:1465093/100‑1 (MQ=255)

                                                        aaaTATTCATTTGTTTGCAAAAAAATATTATGAGGATGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCaga                                       <  1:1764573/99‑1 (MQ=255)

                                                        aaaTATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCagaa                                      <  2:2779454/100‑1 (MQ=255)

                                                         aaTATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCagaag                                     <  1:2903744/100‑1 (MQ=255)

                                                           tatCCATTTGTTTGCAAAAAAAGATTATTAGGAATGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAATATTAGTATACTTTATTCCAGAagag                                   <  2:177186/100‑1 (MQ=255)

                                                             tacATTTTTTCGCAAAAAAATTTTATTAGTTATTTAATTATACCAATTAGTGAACATTCAAAATATATCCTATTTTATTTTATTTTATTCCAGAagag                                   <  2:1936475/96‑1 (MQ=255)

                                                             tCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGtt                                 >  1:1664307/1‑100 (MQ=255)

                                                             tCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGtt                                 >  1:2369697/1‑100 (MQ=255)

                                                              ccATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTc                                <  1:1357207/100‑1 (MQ=255)

                                                               cATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCa                               >  2:2725386/1‑100 (MQ=255)

                                                               cATTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCa                               >  2:1963790/1‑100 (MQ=255)

                                                                aTTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCaa                              <  2:2926408/100‑1 (MQ=255)

                                                                aTTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCaa                              <  1:2623560/100‑1 (MQ=255)

                                                                aTTTGTTTGCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCaa                              <  1:262178/100‑1 (MQ=255)

                                                                 tttgtttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAat                             <  2:1412925/100‑1 (MQ=255)

                                                                 tgtgtttgCAAAAAAAGATTATTATGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCaa                              <  2:2715048/97‑1 (MQ=255)

                                                                  ttgtttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTAAAAAAATATACAACAATAGGATACTTTATTCCAGAAGAGTCCaaaa                            >  2:2859446/1‑98 (MQ=255)

                                                                   tgtttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAACATATCCAAAAATAGTATACTTTATTCCATAAGAGTTCAatct                           <  1:2057153/100‑3 (MQ=255)

                                                                   tgtttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAatat                           <  2:3019221/100‑1 (MQ=255)

                                                                   tgtttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAatat                           >  1:224090/1‑100 (MQ=255)

                                                                    gtttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAAtata                          >  1:1210625/1‑100 (MQ=255)

                                                                    gtttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAAtata                          >  1:2548407/1‑100 (MQ=255)

                                                                    gtttgCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAAtata                          >  2:2334454/1‑100 (MQ=255)

                                                                        gCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGt                      >  1:2395404/1‑100 (MQ=255)

                                                                        gCAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGt                      >  1:1669929/1‑100 (MQ=255)

                                                                         cAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGtt                     >  2:2246846/1‑100 (MQ=255)

                                                                         cAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGtt                     >  2:2271993/1‑100 (MQ=255)

                                                                         cAAAAAAAGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCAAAAAAAAGAAGAATTTATTCCAGAAGAGTTCAATATAAt                        >  1:2423159/1‑97 (MQ=255)

                                                                          aaaaaaaGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGtt                     <  1:978660/99‑1 (MQ=255)

                                                                          aaaaaaaGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGtt                     <  2:31606/99‑1 (MQ=255)

                                                                           aaaaaaGATTATTCGGAAGCGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGCATACTAAATTCCACAACCGTTCAACATAATgat                     >  2:201618/1‑96 (MQ=255)

                                                                             aaaaGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTc                 <  2:1301967/100‑1 (MQ=255)

                                                                             aaaaGATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTc                 <  2:2012331/100‑1 (MQ=255)

                                                                                aGATTATTAGGAAGGGAATTAATGCAATTATCGATAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTc              <  1:1917920/100‑1 (MQ=255)

                                                                                 gATTATTAGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCa             >  1:1578416/1‑100 (MQ=255)

                                                                                     attaGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAAttt         >  2:1602384/1‑100 (MQ=255)

                                                                                     attaGGAAGGGAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATATTTGTCTTCAAttt         >  1:698487/1‑100 (MQ=255)

                                                                                        aggaagggAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAATTTTTc      >  2:979681/1‑100 (MQ=255)

                                                                                        aggaagggAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAATTTTTc      <  2:2034074/100‑1 (MQ=255)

                                                                                        aggaagggAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGATAAATATAATGTTTGTCTTCAATTTTTc      >  1:1049312/1‑100 (MQ=255)

                                                                                        aggaagggAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAATTCAATATAATGTTTGTCTTCAATTTTTc      >  1:1469525/1‑100 (MQ=255)

                                                                                         ggaagggaATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAATTTTTCt     <  2:224088/100‑1 (MQ=255)

                                                                                         ggaagggaATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAATTTTTCt     >  1:116696/1‑100 (MQ=255)

                                                                                           aagggaATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAATTTTTc      <  2:2320054/97‑1 (MQ=255)

TGAGAATGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGAAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAAATAGTATACTTTATTCCAGAAGAGTTCAATATAATGTTTGTCTTCAATTTTTCTTAC  >  NC_000913/1197644‑1197835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`