Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 162,973 | G→A | 100% | C290Y (TGT→TAT) | hrpB → | putative ATP‑dependent helicase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 162,973 | 0 | G | A | 98.5% | 411.5 / ‑4.0 | 127 | C290Y (TGT→TAT) | hrpB | putative ATP‑dependent helicase |
Reads supporting (aligned to +/- strand): ref base G (0/2); new base A (60/64); total (60/67) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
Only 100 of 127 total aligned reads displayed.
TCCTCCCGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTGTGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAGCGTGCCGG > NC_000913/162877‑163069 | tcctccCGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTGTGc < 2:2219748/100‑1 (MQ=255) tcctccCGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGc < 2:1256318/100‑1 (MQ=255) tcctccCGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGc < 2:1704661/100‑1 (MQ=255) tcctccCGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGc > 2:2126733/1‑100 (MQ=255) cctccCGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGcc < 2:2859466/100‑1 (MQ=255) ctccCGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGccc < 2:1069800/100‑1 (MQ=255) ctccCGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGccc < 2:2149819/100‑1 (MQ=255) ctccCGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGccc > 1:1553599/1‑100 (MQ=255) tccCGGCACCGCAAGTGATGCGCACAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAATGTATTCGTCTGGTGGTGGATTATGCCCa < 2:929239/100‑1 (MQ=255) tccCGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCa < 1:2743767/100‑1 (MQ=255) cccGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAg < 1:2649128/100‑1 (MQ=255) cACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCg > 2:532537/1‑100 (MQ=255) cGCAAGGTATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTATTGGATTATGCCCAGGAGCttg < 2:2892355/99‑1 (MQ=255) cGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCgtgt > 2:1430013/1‑100 (MQ=255) aGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGgcg > 2:917767/1‑100 (MQ=255) aGGGATGCGCAAAGTGGCGCTGGCGACCAATATTGCTGAAACCAGTGTAACCATTGAAGGTATTAGACTGGTGGTGGACTATGCCCAGAAGCGagtg > 2:7601/1‑97 (MQ=255) aTGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGtt < 2:2660792/100‑1 (MQ=255) tGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTTGTGGTTTTTGCCCAGGAGCGTGTGGCGCGttt < 2:254713/100‑1 (MQ=255) tGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTGTGCCCAGGAGCGTGTGGCGCGttt < 2:1097729/100‑1 (MQ=255) tGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAAGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGttt > 1:1043635/1‑100 (MQ=255) tGCGCAAAGTGGTGCTGACGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGttt < 1:2771247/100‑1 (MQ=255) gcgcAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGtttt < 1:1138250/100‑1 (MQ=255) cgcAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGtttt < 1:1607392/99‑1 (MQ=255) cgcAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTg > 1:160836/1‑100 (MQ=255) cgcAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTAGTCTGGTGGTGGATTATGACCAGGAGCGTGTGGCGCGTTTTg > 1:2511667/1‑100 (MQ=255) cAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGa < 1:1229546/99‑1 (MQ=255) cAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGAt > 2:1172216/1‑100 (MQ=255) aaaGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATc < 2:1713103/100‑1 (MQ=255) aaaGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATc < 1:2400320/100‑1 (MQ=255) aGTGGTGCTGGCGACCAATATTGCTGATTCCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCcg < 1:146594/100‑1 (MQ=255) aGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCcg < 1:144260/100‑1 (MQ=255) gtggtgCTGGTGAACAATATTGCTGAATCCAGTTTATCTATTGAAGGTATTCGTCTGGGGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATc < 1:172430/97‑1 (MQ=255) gtggtgCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCcgc > 1:2774012/1‑100 (MQ=255) tggtgCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCcgcg > 1:1454264/1‑100 (MQ=255) tgCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCAc > 2:1477966/1‑100 (MQ=255) gCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACg > 1:2276110/1‑100 (MQ=255) gCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACg > 1:674689/1‑100 (MQ=255) gCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAACGTGTGGCGCGTTTTGATCCGCGCACg > 1:1374438/1‑100 (MQ=255) gCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGc < 2:2830770/100‑1 (MQ=255) cGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCt < 2:572940/100‑1 (MQ=255) ccAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTAc > 2:1390308/1‑100 (MQ=255) atatTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTAcgcg < 1:2964421/100‑1 (MQ=255) atatTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTAcgcg < 2:2024313/100‑1 (MQ=255) atatTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTAcgcg > 2:376644/1‑100 (MQ=255) tatTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAACGTATAACGCGATTTAATCCGCGCACGGGGCTTACGCGa > 1:180213/1‑100 (MQ=255) atTGCTGAAACCAGTTTAACCATTGACGGTATTCGTCTGGTTGTGGATTATGCCCAGGAGCTTATAGAGCGTTTTGATCCGCGCACGGGGCTTACGCAAc > 1:1118632/1‑100 (MQ=255) ttGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGTTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACt < 1:2629604/100‑1 (MQ=255) ttGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACt < 2:838265/100‑1 (MQ=255) ttGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACt < 2:647736/100‑1 (MQ=255) cTGAAACCAGTTTAACCATTGAAGGTATTGGTCTGGTGGTGGGTTATGCCCAGGAGCGTGTGGCGCGTTTTTATCCTCTCACGGGGCTTACGTGAc < 2:1451035/96‑1 (MQ=255) cTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGAt > 2:44523/1‑100 (MQ=255) tGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCTCGTTTTGATCCGCGCACGGGGCTTACGCGACTGAtt < 2:632356/100‑1 (MQ=255) tGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGAtt < 2:1033496/100‑1 (MQ=255) gAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTa > 2:1805476/1‑100 (MQ=255) gAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATGATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGAtt < 2:2763738/99‑1 (MQ=255) aaaCCAGTTTAATCATTGAAGGTATTCGTCTGGTGGTGGATTATGCTCAGGAGCGTGTGGCGCGTTTTGATCCTCGCACGGGGCTTACGTGACTGATTAc < 2:1111460/100‑1 (MQ=255) aaCCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACt > 1:2358535/1‑100 (MQ=255) aCCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTc < 2:1552198/100‑1 (MQ=255) aCCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGGGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTc < 1:2208330/100‑1 (MQ=255) ccAGTTTAACCATTGAAGGTATTCGTCTGATGGTGGCTTATGCCCAGAAGCGTGTGGCGCGTTTTAATCGGCGCACGGGGCTTACGCGACTGATTATTCa > 2:880349/1‑100 (MQ=255) aGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAAc < 1:1206386/100‑1 (MQ=255) aGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAAc < 2:1441223/100‑1 (MQ=255) gTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAAcg > 1:375530/1‑100 (MQ=255) gTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAAcg < 1:2770848/100‑1 (MQ=255) ttAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAAcgcg < 2:2880860/100‑1 (MQ=255) ttAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAAcgcg < 1:2952782/100‑1 (MQ=255) tAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGt > 1:2928750/1‑100 (MQ=255) tAACCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGt > 2:2878676/1‑100 (MQ=255) aCCATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTa < 2:1415388/100‑1 (MQ=255) ccATTGCAGGTCTTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGTCGCGTTTTGATCCGCGCACGGCGCTTACGCGACTGATTACTCAACGCGTTAg > 2:1684417/1‑100 (MQ=255) ccATTGAAGGTATTCGTCTGGTGGTGGATTATGCCAAGGAGGGTGTGGCGCGTTTTGATCCGCGCTCGGGGCTTACGGGGCTGGTTACTCAACGCGTTa > 2:758509/1‑99 (MQ=255) cATTGAAGGTATTCGTCTGGTGGTGGATTATGTCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAgn < 1:1395881/100‑2 (MQ=255) cATTGAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGc > 1:349532/1‑100 (MQ=255) aTTGAATGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGc < 1:2577590/99‑1 (MQ=255) tGAAGGTATTCGTCTGGTGATGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCa > 2:2042466/1‑99 (MQ=255) gAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAgg > 1:1689125/1‑100 (MQ=255) gAAGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAgg < 2:1241184/100‑1 (MQ=255) aGGTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGGTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCa < 2:1141989/100‑1 (MQ=255) ggTATTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCAt > 2:2854944/1‑100 (MQ=255) aTTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCa < 2:1242941/100‑1 (MQ=255) aTTCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCa > 1:1961031/1‑100 (MQ=255) tCGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATg < 1:478611/100‑1 (MQ=255) cGTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGa > 1:859211/1‑100 (MQ=255) gTCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGAc > 2:2074182/1‑100 (MQ=255) tCTGGTGGTGGATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACg > 1:2955783/1‑100 (MQ=255) ggtggtggATTATGTCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAg > 1:1457035/1‑100 (MQ=255) ggtggtggATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCa > 1:607817/1‑99 (MQ=255) ggtggtggATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAg > 1:607779/1‑100 (MQ=255) ggtggtggATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAg > 1:2006327/1‑100 (MQ=255) ggtggtggATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAAACAGGCATCCATGACGCa > 1:1757781/1‑99 (MQ=255) tggtggATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAGCg > 2:2892481/1‑100 (MQ=255) tggtggATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAGCg > 2:1599378/1‑100 (MQ=255) tggtggATTATGACCAGGAGCGTGTGGCGCGTTTTGATCAGCGCACGGGGCTTACGCGACTGATGACTCAACAGGTTAGGCAGGCATCCATGAAGCAGCg > 2:304242/1‑100 (MQ=255) ggtggATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAGCGt < 1:2012731/100‑1 (MQ=255) ggtggATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAGCGt < 1:1272903/100‑1 (MQ=255) gtggATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAGCGTg < 1:917773/100‑1 (MQ=255) ggATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAGCGTGc > 2:822178/1‑99 (MQ=255) gATTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAGCGTGCCg < 1:869287/100‑1 (MQ=255) aTTATGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAGCGTGCCgg > 2:1982670/1‑100 (MQ=255) aTTATGCCCAGGAGCGTGTGGCGCATTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAGCGTGCCgg < 2:1315344/100‑1 (MQ=255) | TCCTCCCGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTGTGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAGCGTGCCGG > NC_000913/162877‑163069 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |