| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,435,737 | G→A | 23.7% | intergenic (‑118/+23) | uspF ← / ← ompN | stress‑induced protein, ATP‑binding protein/outer membrane pore protein N, non‑specific |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,435,737 | 0 | G | A | 23.7% | 184.3 / 55.3 | 106 | intergenic (‑118/+23) | uspF/ompN | stress‑induced protein, ATP‑binding protein/outer membrane pore protein N, non‑specific |
| Reads supporting (aligned to +/- strand): ref base G (32/48); new base A (13/12); total (46/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.06e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
TCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATC > NC_000913/1435639‑1435834 | tCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGc < 2:56962/100‑1 (MQ=255) gCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAACCCGCCAt > 1:748063/1‑100 (MQ=255) cATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATa < 1:1154092/100‑1 (MQ=255) aTAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGTTTTAAGGAGGAAAAATAAGAAGAAAAAGTCCTCTATaa > 2:1424424/1‑100 (MQ=255) aaGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAg > 1:2745434/1‑100 (MQ=255) gtAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCggg < 1:2227389/100‑1 (MQ=255) tAACGCCAGATGACACTTTTTGTGTAATGACGGAGATCAAATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGc > 2:2240560/1‑100 (MQ=255) aaCGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCa > 1:1172110/1‑100 (MQ=255) aaCGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCa > 2:908099/1‑100 (MQ=255) aCGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGCAGAATAAGCAGAAAAAGCCCGCCATAACAGCggg > 2:2574186/1‑97 (MQ=255) cGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCagg > 2:940685/1‑100 (MQ=255) ccAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCaggag < 1:1895468/100‑1 (MQ=255) aGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAggagga < 1:1852459/100‑1 (MQ=255) tGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGAttt < 2:434278/100‑1 (MQ=255) tGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGAttt > 2:6396/1‑100 (MQ=255) gACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTa < 2:355910/100‑1 (MQ=255) acacTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTa < 2:788657/99‑1 (MQ=255) acacTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAg < 2:493352/100‑1 (MQ=255) cacTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGa < 1:743958/100‑1 (MQ=255) cacTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGa > 2:1274062/1‑100 (MQ=255) acTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGaa < 2:416356/100‑1 (MQ=255) acTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGa < 1:2562769/99‑1 (MQ=255) cTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAAAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAAc < 2:733939/100‑1 (MQ=255) tttttGTGTAATGATGGAGTTCACATTTTTAATTTAAATCAAAGGAGAAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACt < 1:1386258/100‑1 (MQ=255) tttttGTGTAATGACGGAGTTCACATTTTTACTTTAGAGCATAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAAc < 2:2134428/99‑1 (MQ=255) ttttGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTg < 2:447756/100‑1 (MQ=255) ttttGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTg < 2:44447/100‑1 (MQ=255) ttttGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCAGGCAGGAGGATTTAGAACTg > 1:44447/1‑100 (MQ=255) ttGTGTAATGTCGTAGTTCATATTTTTAATTTAGATTAAAGAATGAAGAATAAGCAGAAAAGGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGAt < 1:487508/100‑1 (MQ=255) tgtgTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATa > 2:2148823/1‑100 (MQ=255) tgtAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATaaa < 2:2002553/100‑1 (MQ=255) tgtAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATaaa > 1:1718822/1‑100 (MQ=255) tgtAATGACGGAGTTCACATTTTGAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAATGCCCGCCATGACAGCGGGCAGGAGGATTTAGAACTGaca < 2:2344045/98‑3 (MQ=255) tAATGACGGAGTTCACATTTTTAATTTATATCAAAGGAGTAAGAATAAGCAGAAAAATCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAAcc < 1:758838/100‑1 (MQ=255) tAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCACGCCATAACAGCGGGCAGGAGGATTTAGAACTGATaaa > 2:2123372/1‑98 (MQ=255) gACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGAc > 2:596776/1‑100 (MQ=255) gACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGAc < 2:1512522/100‑1 (MQ=255) gACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGAc < 2:35051/100‑1 (MQ=255) acttaGTTTACATTTCTAATTTAGATCAAAGGAAGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCTGGCAGGAGGATTTAGTACTGATAAACCAGAcc < 2:740360/96‑1 (MQ=255) aCGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGAcc < 1:30110/100‑1 (MQ=255) aCGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGTTTTAGAACTGATAAACCAGAcc < 2:1760107/100‑1 (MQ=255) gaaGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGAAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGAGTTAGAACTGATAAACCAGa < 2:2012359/94‑1 (MQ=255) gTTCACATTTTTAATTTAGATTAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAg < 1:1191229/100‑1 (MQ=255) tCACATTTTTAATTTATATCAAAGGAGAAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCg < 1:737662/100‑1 (MQ=255) tCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCg < 2:1327650/100‑1 (MQ=255) cacaTTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGa > 2:202182/1‑100 (MQ=255) cacaTTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAAACCTAAAGCGa > 1:467025/1‑100 (MQ=255) acaTTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCACCATAACAGCGTGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGAc < 2:2987376/100‑1 (MQ=255) acaTTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCACCATAACAGCGGGCAGAAGGATTTAGAACTGATAAACCAGACCTAAAGCGAc > 1:546891/1‑100 (MQ=255) caTTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACa > 1:1260906/1‑100 (MQ=255) caTTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACa < 1:1821488/100‑1 (MQ=255) caTTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACa < 2:2982536/100‑1 (MQ=255) caTTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACa < 2:2939773/100‑1 (MQ=255) caTTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACa < 2:1268420/100‑1 (MQ=255) caTTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCT‑AAGCGACaa > 2:2622180/1‑100 (MQ=255) aTTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACaa < 2:2476320/100‑1 (MQ=255) aTTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACaa > 2:1094408/1‑100 (MQ=255) tttttAATTTAGATAAAAGTAGTAAGAATAAGCTTAAAAATCCCGCCATAACAGCTTGCAGTTGAATTTAAAACTTATAAACCAGACCTAAAGCTACAat < 2:2409032/100‑1 (MQ=255) tttAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAatat < 2:1000120/100‑1 (MQ=255) tAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATatca > 1:1256174/1‑100 (MQ=255) tAATTTAGATAAAAGGAGGAAGAATAAGCAGAAAAAGACCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATatca < 1:2660051/100‑1 (MQ=255) aTTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATatcatc < 1:2365463/100‑1 (MQ=255) ttAGATCAAAGGAGGAAGAATAAGAAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCgg < 1:101412/100‑1 (MQ=255) aGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTa < 1:404729/100‑1 (MQ=255) aGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTa < 1:2296654/100‑1 (MQ=255) gATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGt > 2:2449441/1‑98 (MQ=255) gATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCACCATCACAGCGGGCTGGAGGATTTATAACTGATAAAACAAAACAAAAACGACAAAATCATCGGTa > 1:205057/1‑99 (MQ=255) gATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTag > 2:2663943/1‑100 (MQ=255) aTCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTaga < 1:234709/100‑1 (MQ=255) aTCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGAATTTAGAACTGATAAACCAGACCTAAAACGACAATATCATCGGTaga > 1:338063/1‑100 (MQ=255) tccacggaggaAGAATAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGCGGATTTAGAACTCATAAACCAGACCCAAAGCGAccatcccatc > 2:2583396/6‑93 (MQ=255) tCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTagag > 2:2765592/1‑100 (MQ=255) tCAAAGGAGGAAGAATAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTagag < 1:1728032/100‑1 (MQ=255) aaaGGAGGAAGAATAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGAt > 1:2641424/1‑100 (MQ=255) aaaGGAGGAAGAATAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGAt > 1:2641431/1‑100 (MQ=255) ggggaAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGAACTAAAGCGACAATATCATCGGTAGAGATGCCa > 1:2044597/3‑100 (MQ=255) gaagaaTAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTg < 2:528738/100‑1 (MQ=255) gaagaaTAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTg < 2:215548/100‑1 (MQ=255) aagaaTAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTgg < 1:3004619/100‑1 (MQ=255) aagaaTAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCAtt > 1:1519040/1‑98 (MQ=255) agaaTAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGc < 2:2586114/100‑1 (MQ=255) gaaTAAGTAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGc < 1:1984294/99‑1 (MQ=255) aaTAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAg < 2:938570/100‑1 (MQ=255) tAAGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCg > 1:1345307/1‑100 (MQ=255) aaGCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGt < 1:269376/100‑1 (MQ=255) aGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTa > 1:347638/1‑100 (MQ=255) aGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTa > 1:2413058/1‑100 (MQ=255) gCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAg < 2:2354294/100‑1 (MQ=255) gCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAg > 1:1357369/1‑100 (MQ=255) gCAGAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAg > 1:2019702/1‑100 (MQ=255) aGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGa < 1:1359600/99‑1 (MQ=255) gAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAg > 2:1961036/1‑100 (MQ=255) gAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATATACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAg < 1:848212/100‑1 (MQ=255) gAAAAAGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCAATTGGCAGCGTAGAAg > 1:1203516/1‑100 (MQ=255) aaaGCCCGTGATATCAGCGGGCAGGAGGATTTAGAACTGATAAACGAGAACTAAAGCGACAATATTGTCGGTAGAAATGCCATTGGCAGCGTAGaa > 2:1340902/1‑96 (MQ=255) aaGCCCACCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGt < 1:2232546/100‑1 (MQ=255) aGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTc > 2:2435083/1‑100 (MQ=255) gCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCa > 2:158058/1‑100 (MQ=255) gCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCa < 1:286945/100‑1 (MQ=255) ccGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATc > 1:3015897/1‑100 (MQ=255) | TCCGCATAAAGTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGGTAGAGATGCCATTGGCAGCGTAGAAGCTGTCATC > NC_000913/1435639‑1435834 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |