Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,465,1840GA21.5% 257.5 / 68.4 130P16L (CCA→CTA) ynbGuncharacterized protein
Reads supporting (aligned to +/- strand):  ref base G (53/49);  new base A (17/11);  total (70/60)
Fisher's exact test for biased strand distribution p-value = 5.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.12e-01

Only 100 of 132 total aligned reads displayed.

TTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATTATAGGAAAGTATGTTT  >  NC_000913/1465085‑1465283
                                                                                                   |                                                                                                   
tttAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAAtgtg                                                                                                     >  1:1011752/1‑100 (MQ=255)
  tAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGt                                                                                                   <  2:326601/100‑1 (MQ=255)
  tAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTACTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGt                                                                                                   >  1:1068644/1‑100 (MQ=255)
  tAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTAATTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGt                                                                                                   >  1:1068601/1‑100 (MQ=255)
   aaTTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGtt                                                                                                  >  2:940289/1‑100 (MQ=255)
     ttATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTTTTTTTTTTTTTATTTATAATGAGAATTTGGtttt                                                                                                >  1:1885551/1‑100 (MQ=255)
     ttATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGtttt                                                                                                <  2:234968/100‑1 (MQ=255)
      tataAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTa                                                                                               <  1:114608/100‑1 (MQ=255)
          aaGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATAACGTTTTTTCATCATATTATTATTTATAATGAGAATGTAGTTTTAAttt                                                                                           >  1:260830/1‑100 (MQ=255)
           aGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTg                                                                                          <  1:367524/100‑1 (MQ=255)
              agagTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTaa                                                                                       >  2:825385/1‑100 (MQ=255)
                 gTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAAttt                                                                                    <  1:1001494/100‑1 (MQ=255)
                   tATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATttat                                                                                  >  2:152253/1‑100 (MQ=255)
                    aTGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATttata                                                                                 >  1:256350/1‑100 (MQ=255)
                     tGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATttatat                                                                                <  1:552376/100‑1 (MQ=255)
                      gTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATttatatt                                                                               >  1:213014/1‑100 (MQ=255)
                      gTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATttatatt                                                                               >  1:766024/1‑100 (MQ=255)
                         tctgCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATttatattata                                                                            <  2:462393/97‑1 (MQ=255)
                         tAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATttatattata                                                                            >  1:60622/1‑100 (MQ=255)
                          aaGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTtatattatat                                                                           <  2:1340481/100‑1 (MQ=255)
                          aaGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTtatattatat                                                                           <  1:1669569/100‑1 (MQ=255)
                           aGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATtatata                                                                          <  2:1192888/100‑1 (MQ=255)
                           aGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATtatata                                                                          <  1:1116184/100‑1 (MQ=255)
                           aGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATtatata                                                                          <  1:766536/100‑1 (MQ=255)
                           aGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATtatata                                                                          <  1:1820218/100‑1 (MQ=255)
                            gCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATac                                                                         >  2:71518/1‑100 (MQ=255)
                             ctctGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATaca                                                                        >  2:336710/1‑100 (MQ=255)
                             ctctGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATaca                                                                        >  2:336304/1‑100 (MQ=255)
                              tctGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATacac                                                                       >  2:347754/1‑100 (MQ=255)
                              tctGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATaca                                                                        >  1:187192/1‑99 (MQ=255)
                               ctGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATAcaca                                                                      >  1:364169/1‑100 (MQ=255)
                                tGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACaa                                                                     <  1:510936/100‑1 (MQ=255)
                                 gCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAAt                                                                    >  1:342781/1‑100 (MQ=255)
                                 gCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAAt                                                                    >  2:225072/1‑100 (MQ=255)
                                 gCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAAt                                                                    >  1:241088/1‑100 (MQ=255)
                                 gCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACAAt                                                                    >  2:1067044/1‑100 (MQ=255)
                                 gCTTTATTTATTTGAGTATTAATTCATACCG‑TTTTTCATCATATAATTATTTATAATGAGAAAGTGGTATTAATTTGTAATTTATATTATATACACAAtt                                                                   >  1:1313549/1‑100 (MQ=255)
                                   tttatttaTTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAAtt                                                                   <  1:513981/99‑1 (MQ=255)
                                   tttatttaTTTGAGTATTAATTAATACCGTTTTTTAATCATATAATTATTTATAATGAGATTGTGGTTTTAATTTGTAATTTATATTATATACAAAtttt                                                                  >  1:1875760/1‑100 (MQ=255)
                                     tatttattTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGACTGTAGTTTTAATTTGTAATTTATATTATATACACAATTtat                                                                >  1:1584466/1‑100 (MQ=255)
                                     tatttattTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACAATTtat                                                                >  2:1153970/1‑100 (MQ=255)
                                      ccgatcttGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTtata                                                               <  1:890093/94‑1 (MQ=255)
                                      atttatttGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTtata                                                               <  1:448760/100‑1 (MQ=255)
                                      atttatttGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTtata                                                               <  1:150519/100‑1 (MQ=255)
                                         tatttGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTatatat                                                            >  2:1667286/1‑100 (MQ=255)
                                          ttccgatctttAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATAtt                                                           <  2:718868/91‑1 (MQ=255)
                                           tttGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACAATTTATATAttt                                                          <  2:1086300/100‑1 (MQ=255)
                                             taaGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTc                                                         <  1:1892361/97‑1 (MQ=255)
                                             tGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTtataagatcgg                                                        >  2:890094/1‑93 (MQ=255)
                                             tGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCa                                                        >  1:791014/1‑100 (MQ=255)
                                             tGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCa                                                        >  1:1563394/1‑100 (MQ=255)
                                             tGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCa                                                        >  1:791027/1‑100 (MQ=255)
                                             tGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCa                                                        >  2:1481279/1‑100 (MQ=255)
                                               aGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATg                                                      <  1:225071/100‑1 (MQ=255)
                                                gTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATgg                                                     >  1:137791/1‑100 (MQ=255)
                                                gTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATgg                                                     >  1:1170045/1‑100 (MQ=255)
                                                   ttAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCt                                                  >  2:142935/1‑100 (MQ=255)
                                                      aTTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCtttt                                               >  1:1605929/1‑100 (MQ=255)
                                                        tCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCtttttt                                             <  2:426715/100‑1 (MQ=255)
                                                         cATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCtttttt                                             <  1:1331777/99‑1 (MQ=255)
                                                         cATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCttttttt                                            >  1:931335/1‑100 (MQ=255)
                                                            aCCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTAtt                                         <  1:103155/100‑1 (MQ=255)
                                                            aCCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTAtt                                         <  2:1141238/100‑1 (MQ=255)
                                                             ccGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTAtt                                         >  1:1689115/1‑99 (MQ=255)
                                                             ccGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTc                                        <  2:90011/100‑1 (MQ=255)
                                                             ccGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTAtt                                         >  1:449740/1‑99 (MQ=255)
                                                             ccGTTTTTTCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTc                                        <  1:791985/100‑1 (MQ=255)
                                                              cGTTTTTTCATCATATTATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCa                                       <  2:31287/100‑1 (MQ=255)
                                                               gTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCAc                                      >  2:258192/1‑100 (MQ=255)
                                                                ttttttCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCAcc                                     <  1:610354/100‑1 (MQ=255)
                                                                ttttttCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCAcc                                     <  1:1112198/100‑1 (MQ=255)
                                                                   tttCATCATATAATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCt                                    >  1:573816/1‑98 (MQ=255)
                                                                     tcatcaTATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAAt                                <  1:1839923/100‑1 (MQ=255)
                                                                     tcatcaTATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAAt                                <  1:1068264/100‑1 (MQ=255)
                                                                      catcatATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAAtt                               >  2:888810/1‑100 (MQ=255)
                                                                         catATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATtata                            >  2:970766/1‑100 (MQ=255)
                                                                         catATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATtata                            <  1:1835537/100‑1 (MQ=255)
                                                                          atatAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATaa                           <  2:1655225/100‑1 (MQ=255)
                                                                           tataATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAAt                          >  1:726170/1‑100 (MQ=255)
                                                                            ataATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAAtt                         <  2:1592493/100‑1 (MQ=255)
                                                                            ataATTATTTATAATGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAAtt                         <  2:317578/100‑1 (MQ=255)
                                                                             taATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATtg                        <  2:791029/100‑1 (MQ=255)
                                                                             taATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATtg                        <  2:791016/100‑1 (MQ=255)
                                                                             taATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATtg                        <  1:71518/100‑1 (MQ=255)
                                                                              aaTTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATtgt                       <  1:1019721/100‑1 (MQ=255)
                                                                               attattTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATtgtg                      >  2:50574/1‑100 (MQ=255)
                                                                               attattTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATtgtg                      <  2:1523750/100‑1 (MQ=255)
                                                                               attattTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATtgtg                      >  1:227333/1‑100 (MQ=255)
                                                                                ntatttatAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTATTTTTTTATTCACCCGAATTATAATtgt                       >  1:882963/2‑98 (MQ=255)
                                                                                 tatttatAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGaa                    <  2:1085088/100‑1 (MQ=255)
                                                                                  atttatAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAAt                   <  1:152252/100‑1 (MQ=255)
                                                                                    ttatAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATta                 <  1:448450/100‑1 (MQ=255)
                                                                                       taATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTTTATTATAATTGTGAATtata               >  1:1693418/1‑99 (MQ=255)
                                                                                       taAGGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTCTCCTTGTGAATtata               >  2:1622484/1‑99 (MQ=255)
                                                                                        aaTGAGAATGTAGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATTATAgg             >  2:1896687/1‑100 (MQ=255)
                                                                                         aTGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATTATAGGa            >  2:446335/1‑100 (MQ=255)
                                                                                            agaATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATTATAGGAAAg         <  1:572509/100‑1 (MQ=255)
                                                                                              aaTGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATTATAGGAAAGTa       <  1:769173/100‑1 (MQ=255)
                                                                                              aaTGTAGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATTATAGGAAAGTa       <  2:939709/100‑1 (MQ=255)
                                                                                               aTGTAGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACTTGAATTATAATTGTGAATTATAGGTAAGTAt      >  1:574321/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATTATAGGAAAGTATGTTT  >  NC_000913/1465085‑1465283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑