BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,287,303	0	A	T	65.8%	131.8 / 125.5	114	intergenic (+278/‑123)	agaI/yraH	galactosamine‑6‑phosphate isomerase/putative fimbrial‑like adhesin protein
Reads supporting (aligned to +/- strand): ref base A (17/22); new base T (33/42); total (50/64)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.54e-01

Only 100 of 125 total aligned reads displayed.

GCCCCCTGGCGCAGCAAAGTCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTAAATATGATTATG  >  NC_000913/3287205‑3287399

gCCCCCTGGCGCAGCAAAGTCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCatataaatataa                                                                                                 >  1:626450/1‑100 (MQ=255)

gCCCCCTGGCGCAGCAAAGTCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCatataaatataa                                                                                                 >  1:1653433/1‑100 (MQ=255)

   cccTGGCGCAGCAAAGTCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCt                                                                                              >  2:221877/1‑100 (MQ=255)

     cTGGCGCAGCAAAGTCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCt                                                                                              <  1:448136/98‑1 (MQ=255)

      tGGCGCAGCAAAGTCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCtt                                                                                             <  1:111122/98‑1 (MQ=255)

        gcgcAGCAAAGTCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAg                                                                                         >  1:1259314/1‑100 (MQ=255)

           cagcaAAGTCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTc                                                                                      <  2:1182615/100‑1 (MQ=255)

            agcaAAGTCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTc                                                                                      <  1:1588720/99‑1 (MQ=255)

            agcaAAGTCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCa                                                                                     >  2:1680098/1‑100 (MQ=255)

             gcaAAGTCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAg                                                                                    <  1:1794635/100‑1 (MQ=255)

             gcaAAGTCAGGCATTTATACTCTTTTGAATACATAAAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTaa                                                                                           <  1:1845759/93‑1 (MQ=255)

               aaaGTCAGGCATTTATACTCTTTTGAATACATAAAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTc                                                                                  <  1:461095/100‑1 (MQ=255)

                 aGTCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTa                                                                                <  2:104685/100‑1 (MQ=255)

                   tCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTAtt                                                                              >  1:1580026/1‑100 (MQ=255)

                    cAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTAttt                                                                             <  1:1115718/100‑1 (MQ=255)

                     aGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTa                                                                            <  2:1039439/100‑1 (MQ=255)

                      ggCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATAAAATATTTGCATATAAATATAATCTTAAAGATCAGTCTATTTa                                                                            >  1:1445214/1‑99 (MQ=255)

                       gCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAAt                                                                          <  1:752822/100‑1 (MQ=255)

                       gCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAAt                                                                          <  2:1446125/100‑1 (MQ=255)

                        cATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATg                                                                         <  1:12851/100‑1 (MQ=255)

                           ttATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTc                                                                      <  1:150551/100‑1 (MQ=255)

                               aCTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATg                                                                  <  1:34875/100‑1 (MQ=255)

                                ctctTTTGAATACATAGAAAATTGATCTCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATTTTCAATGa                                                                 >  1:1722717/1‑100 (MQ=255)

                                ctctTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGa                                                                 >  1:327451/1‑100 (MQ=255)

                                ctctTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGa                                                                 <  2:325140/100‑1 (MQ=255)

                                 tctTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGaa                                                                >  2:1526585/1‑100 (MQ=255)

                                  ctTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATTAAATAATTGCATATACATATTATCTAACAGTACAGGCTATTAAATGGTCAATgca                                                                >  1:231576/1‑97 (MQ=255)

                                  ctTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGaaa                                                               >  1:1607304/1‑100 (MQ=255)

                                  ctTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGaaa                                                               <  1:546158/100‑1 (MQ=255)

                                  ctTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGaaa                                                               <  2:1523106/100‑1 (MQ=255)

                                  ctTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGaaa                                                               >  2:1371041/1‑100 (MQ=255)

                                     ttGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAatat                                                            >  1:501746/1‑100 (MQ=255)

                                        aaTACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTc                                                         <  1:1151286/100‑1 (MQ=255)

                                          tACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTg                                                       >  1:1386783/1‑100 (MQ=255)

                                          tACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTg                                                       <  1:379538/100‑1 (MQ=255)

                                          tACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTg                                                       <  2:486309/100‑1 (MQ=255)

                                           aCATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGc                                                      >  1:1554455/1‑100 (MQ=255)

                                            cATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATACTTATGcc                                                     >  1:1048931/1‑100 (MQ=255)

                                            cATAGAAAATTGATATCAATATAATGAAAATATCAAATATATGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGc                                                      >  1:762407/1‑99 (MQ=255)

                                             aTAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCt                                                    >  1:119690/1‑100 (MQ=255)

                                             aTAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCt                                                    >  2:221147/1‑100 (MQ=255)

                                              tAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTg                                                   <  2:721297/100‑1 (MQ=255)

                                              tAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTg                                                   >  2:1720344/1‑100 (MQ=255)

                                              tAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTg                                                   >  1:529613/1‑100 (MQ=255)

                                               aGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGt                                                  >  2:846204/1‑100 (MQ=255)

                                                gAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGta                                                 <  1:1102498/100‑1 (MQ=255)

                                                gAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGta                                                 >  2:1730514/1‑100 (MQ=255)

                                                 aaaaTTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGtat                                                >  2:140731/1‑100 (MQ=255)

                                                    aTTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAAt                                             >  1:54687/1‑100 (MQ=255)

                                                     ttGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATc                                            <  1:1658389/100‑1 (MQ=255)

                                                       gATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCtt                                          >  1:1819807/1‑100 (MQ=255)

                                                        atatCAATATAATGAAAATATCCAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTATTGTTCAATGAAATATTTCTGCCTGTATAATAttt                                         >  1:306606/1‑100 (MQ=255)

                                                         tatCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTa                                        <  1:583637/100‑1 (MQ=255)

                                                          atCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTaa                                       <  1:1340654/100‑1 (MQ=255)

                                                          atCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTaa                                       >  1:765625/1‑100 (MQ=255)

                                                          atCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTaa                                       >  2:422677/1‑100 (MQ=255)

                                                           tCAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTaaa                                      <  2:465947/100‑1 (MQ=255)

                                                           tCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTaaa                                      <  2:113400/100‑1 (MQ=255)

                                                            cAATATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAg                                     <  2:895271/100‑1 (MQ=255)

                                                            cAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAg                                     <  2:626451/100‑1 (MQ=255)

                                                             aaTATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTaaa                                      <  2:1549946/98‑1 (MQ=255)

                                                             aaTATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGa                                    <  1:893266/100‑1 (MQ=255)

                                                             aaTATAATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGa                                    <  1:307383/100‑1 (MQ=255)

                                                              atatAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGAt                                   >  1:614121/1‑100 (MQ=255)

                                                                 taATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGtt                                >  1:980055/1‑100 (MQ=255)

                                                                 taATGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGtt                                >  1:1780109/1‑100 (MQ=255)

                                                                  aaTGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTg                               <  2:1607315/100‑1 (MQ=255)

                                                                  aaTGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTg                               <  1:1166877/100‑1 (MQ=255)

                                                                   aTGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGa                              >  2:71945/1‑100 (MQ=255)

                                                                   aTGAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGa                              >  1:243464/1‑100 (MQ=255)

                                                                   aTGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGa                              <  1:1371033/100‑1 (MQ=255)

                                                                    tGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGaa                             >  1:261428/1‑100 (MQ=255)

                                                                    tGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGaa                             >  1:765427/1‑100 (MQ=255)

                                                                     gAAAATATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAAc                            <  2:1885659/100‑1 (MQ=255)

                                                                      aaaaTATCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACa                           <  1:1888298/100‑1 (MQ=255)

                                                                      aaaaTATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACa                           <  1:1458110/100‑1 (MQ=255)

                                                                       aaaTATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACat                          <  1:1680088/100‑1 (MQ=255)

                                                                           atCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACatatat                      >  2:1544463/1‑100 (MQ=255)

                                                                           atCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACatatat                      >  2:710263/1‑100 (MQ=255)

                                                                           atCAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACatatat                      >  2:872616/1‑100 (MQ=255)

                                                                           atCAAATATTTGCATATAAATATAATCTTAAAGTTCAATCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACatat                        >  1:1041064/1‑98 (MQ=255)

                                                                            tCAAATATTTGAATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATAtt                     <  1:454666/100‑1 (MQ=255)

                                                                             cAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTc                    >  1:1858641/1‑100 (MQ=255)

                                                                             cAAATATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTc                    <  1:1378656/100‑1 (MQ=255)

                                                                              aaaTATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTc                    >  1:1092547/1‑99 (MQ=255)

                                                                               aaTATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTcac                  <  2:1141642/100‑1 (MQ=255)

                                                                               aaTATTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTcac                  <  1:1730503/100‑1 (MQ=255)

                                                                                atatTTGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTcaca                 <  2:1828567/100‑1 (MQ=255)

                                                                                  atTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACAtt               <  2:381692/100‑1 (MQ=255)

                                                                                    ttGCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTaa             <  1:232485/100‑1 (MQ=255)

                                                                                      gCATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTAAat           <  2:1259318/100‑1 (MQ=255)

                                                                                      gCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTAAat           <  2:960638/100‑1 (MQ=255)

                                                                                       cATATAAATATTATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTAAata          <  2:49521/100‑1 (MQ=255)

                                                                                        atataaatattaTCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTAAatat         <  1:1587146/100‑1 (MQ=255)

                                                                                           taaatattaTCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTAAATATGAt      <  2:483676/100‑1 (MQ=255)

                                                                                           taaatataaTCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTAAATATGAt      >  2:736049/1‑100 (MQ=255)

                                                                                            aaatataaTCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTAAATATGAtt     <  1:1526577/100‑1 (MQ=255)

                                                                                             aatattaTCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTAAATATGATTa    <  1:1111321/100‑1 (MQ=255)

                                                                                             aatataaTCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTAAATATGATTa    <  2:1653443/100‑1 (MQ=255)

                                                                                               tataaTCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTAAATATGATTATg  <  1:674004/100‑1 (MQ=255)

GCCCCCTGGCGCAGCAAAGTCAGGCATTTATACTCTTTTGAATACATAGAAAATTGATATCAATATAATGAAAATATCAAATATTTGCATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAATGAAATATTTCTGCCTGTATAATCTTTAAAGATGTTGAACATATATTCACATTAAATATGATTATG  >  NC_000913/3287205‑3287399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`