| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,705,985 | 0 | T | C | 23.2% | 239.8 / 67.3 | 113 | intergenic (‑195/+113) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base T (44/42); new base C (25/1); total (70/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.55e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.27e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
GCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGT > NC_000913/3705887‑3706081 | gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa < 1:420428/100‑1 (MQ=255) ctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTAt > 2:1923740/1‑100 (MQ=255) ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGc > 2:912758/1‑100 (MQ=255) gATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGca < 1:1724501/100‑2 (MQ=37) aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCt < 2:726386/100‑1 (MQ=255) tGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCt > 2:1213985/1‑99 (MQ=255) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACa > 2:1681930/1‑100 (MQ=255) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACa < 1:1235751/100‑1 (MQ=255) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACa < 2:36332/100‑1 (MQ=255) gcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACaaa > 2:1720554/1‑100 (MQ=255) tGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAAt > 2:1431824/1‑100 (MQ=255) gCACGCCGACGCACAGCGCCACCGGGAACACAGATTGTTCACCAACTGCGCTCTGGTTATGCCGAATGCGCCACTAACGCCTTATCCAGCCt < 1:1551245/92‑1 (MQ=16) gCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATc < 1:1490313/100‑1 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCg < 1:95243/100‑1 (MQ=255) aCGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGt > 2:929420/1‑100 (MQ=255) aCGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGt > 1:513789/1‑100 (MQ=255) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTg > 2:853426/1‑100 (MQ=255) cGCAGAGGCACAGCGACACCGGGTATACAGATTGTTGACAAAGTGCGCTTTATTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTg > 2:1159272/1‑100 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGc < 2:1406078/100‑1 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGc < 2:1888875/100‑1 (MQ=255) cAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCa > 1:622817/1‑100 (MQ=255) gagGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCaaa > 1:1910472/1‑100 (MQ=255) gagGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCaaa > 2:85381/1‑100 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAACTCGTGCAAATTc > 2:1816063/1‑99 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCa < 2:262425/100‑1 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCa > 2:923149/1‑100 (MQ=255) caGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAAt < 1:1904173/100‑1 (MQ=255) caGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAAt > 2:1941258/1‑100 (MQ=255) gcgcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATAc > 2:1067331/1‑100 (MQ=255) gcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACAt > 2:150104/1‑100 (MQ=255) ccACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACAtt < 1:678424/100‑1 (MQ=255) ccACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTAAACAGCATAAAAAATCGTGCAAATTCAATACAt < 1:760686/99‑1 (MQ=18) aCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGc < 2:168415/100‑1 (MQ=255) aCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGc < 2:756387/100‑1 (MQ=255) gTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑At < 1:440103/100‑1 (MQ=255) tataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAACTAGTGCAAATTCAATACATTGCAGA‑At‑t > 1:814428/1‑100 (MQ=255) taCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑At‑t‑tt > 2:365665/1‑100 (MQ=255) taCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑At‑t‑tt > 1:816763/1‑100 (MQ=255) aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTc < 2:1426433/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑g < 1:1175204/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑g < 1:965313/100‑1 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑Gt < 2:731661/100‑1 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑Gt < 2:731520/100‑1 (MQ=255) ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAgg > 2:681743/1‑100 (MQ=255) cataaaCAAAGCGCACTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGc > 1:1015712/6‑100 (MQ=18) ttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCt < 1:814158/100‑1 (MQ=255) naCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGa > 2:176703/2‑100 (MQ=255) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGa > 1:805237/1‑100 (MQ=255) aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGAt < 1:1150679/100‑1 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATa < 2:1543414/100‑1 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACCCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑CT‑T‑TTC‑‑GTAGGCCTGCTa > 2:1549256/1‑100 (MQ=255) aaGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAg > 2:1711741/1‑100 (MQ=255) aGTGCGCTTTGTTAATGCCGGATGCGGCGTTAACGCCTGATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGc > 1:1201628/1‑100 (MQ=255) gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCg < 2:1069316/100‑1 (MQ=255) gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGa > 2:1581820/1‑100 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAg > 1:1864473/1‑100 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGan < 1:409631/99‑2 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAgcg > 1:1807471/1‑100 (MQ=255) tttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGC‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAgcgc > 1:1761028/1‑100 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCa < 2:814429/100‑1 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCa < 2:427714/100‑1 (MQ=255) tcttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCATG‑AG‑C‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCa > 2:445985/9‑100 (MQ=17) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGG‑AG‑C‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCAt > 2:541519/8‑100 (MQ=17) tGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCAt > 1:1775223/1‑100 (MQ=255) ttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAATTC‑TGCAAATTCAACAAATTGC‑GA‑ATCC‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCa > 2:1673492/7‑100 (MQ=18) gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCATACAAAATCGTGCTAATTCAATATATTGCAGA‑AA‑C‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:1450369/5‑100 (MQ=18) gtaggCCGGATAAGGCGGTCACGCCGCATCCGGCCTACGAAACCGCAAGAATTCAATATATTGCAGG‑AG‑C‑GGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:514211/5‑100 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAATAGCATGCAAATTCAATATATTGCAGA‑GT‑T‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:1198123/3‑100 (MQ=17) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAAT‑CT‑T‑CTG‑‑GTAGGCCTGATAAGCATCGCGCATCAGGc > 1:530482/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACTTTGCAAATTCAATATATTGC‑‑A‑AT‑C‑TCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:626082/3‑100 (MQ=18) aggCCGGATAAGGCGTTAACGCCGCATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGc > 1:985635/3‑100 (MQ=17) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAATTC‑TGCAAATTCAACAAATTGC‑GA‑AT‑CCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAt > 1:296662/2‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAATCGTGCAAATTCAACATATTGC‑‑A‑AT‑T‑CTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGct > 1:1925793/2‑99 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACTTTGCAAATTCAATATATTGC‑‑A‑AT‑C‑TCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:925475/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGG‑AA‑A‑CAC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGCa > 1:1011851/2‑100 (MQ=18) ggCCGGATAAGGCGTTAACGCCGCATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa > 2:741201/2‑100 (MQ=17) ccggataaggcgTTCACGCCGCATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACC‑AT‑C‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 2:1783484/9‑98 (MQ=21) ccggataaggcgTTCACGCCGCATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGAT‑C‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 2:1353761/9‑98 (MQ=17) ccggataaggcgTTCACGCCGCATCCGGCCTACAAAAACCTGTAAATTCAATATATTGCAGG‑AT‑A‑CGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 2:1087884/9‑98 (MQ=18) ccGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtt < 1:24958/100‑1 (MQ=255) ggataaggcgTTTACGCCGCATCCGGCCTACAAATTC‑TGCAAATTCAACAAATTGC‑GA‑ATCC‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttgc > 2:118080/7‑98 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCACC‑AT‑C‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaattc > 1:326061/7‑96 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCAGG‑AG‑C‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:578001/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGG‑AA‑A‑CAC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGCAgttt > 1:1787459/7‑100 (MQ=18) aTGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:311171/100‑1 (MQ=255) tGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc > 2:515107/1‑100 (MQ=255) gcggcgTTACCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 2:1341813/100‑1 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 2:1728513/100‑1 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc > 1:1632530/1‑100 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 2:816764/100‑1 (MQ=255) ctgcgTTAACGCCTTATCCGGCTTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct > 1:870356/3‑100 (MQ=255) cggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct > 2:1798110/1‑100 (MQ=255) gcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgccttt > 1:1329850/1‑100 (MQ=255) cgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg > 2:123179/1‑100 (MQ=255) gTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgc < 2:1592142/100‑1 (MQ=255) gTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgc < 1:377226/100‑1 (MQ=255) aCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc > 1:653428/1‑100 (MQ=255) gCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg > 2:1247030/1‑100 (MQ=255) gCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg > 1:209286/1‑100 (MQ=255) cTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGt > 2:1727668/1‑99 (MQ=255) | GCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCAGA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGT > NC_000913/3705887‑3706081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |