Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,071,321 A→G intergenic (+110/‑218) yeeP → / → flu pseudogene, CP4‑44 prophage; 50S ribosome‑binding GTPase family;Phage or Prophage Related; putative histone/CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,071,3210AG96.0% 341.2 / 1.7 101intergenic (+110/‑218)yeeP/flupseudogene, CP4‑44 prophage; 50S ribosome‑binding GTPase family;Phage or Prophage Related; putative histone/CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter
Reads supporting (aligned to +/- strand):  ref base A (1/3);  new base G (51/45);  total (52/49)
Fisher's exact test for biased strand distribution p-value = 3.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01

Only 100 of 102 total aligned reads displayed.

GATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGA  >  NC_000913/2071225‑2071415
                                                                                                |                                                                                              
gATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGata                                                                                             >  2:96753/1‑100 (MQ=255)
gATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGata                                                                                             <  1:595762/100‑1 (MQ=255)
gATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGata                                                                                             <  1:1381829/100‑1 (MQ=255)
   gCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCt                                                                                          >  1:761291/1‑100 (MQ=255)
   gCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCt                                                                                          >  1:806721/1‑100 (MQ=255)
   gCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCt                                                                                          >  2:453070/1‑100 (MQ=255)
    ccctccctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTa                                                                                         >  2:1247177/1‑100 (MQ=255)
     cctccctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTAt                                                                                        >  1:1692161/1‑100 (MQ=255)
      ctccctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTAtt                                                                                       <  2:446085/100‑1 (MQ=255)
       tccctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTAttt                                                                                      <  1:72124/100‑1 (MQ=255)
        ccctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTAtttt                                                                                     >  2:454871/1‑100 (MQ=255)
        ccctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTAtttt                                                                                     <  2:854137/100‑1 (MQ=255)
        ccctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTAtttt                                                                                     >  1:1661949/1‑100 (MQ=255)
        ccctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTAtttt                                                                                     <  2:854221/100‑1 (MQ=255)
         cctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTa                                                                                    >  2:1732834/1‑100 (MQ=255)
         cctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTa                                                                                    >  1:885963/1‑100 (MQ=255)
         cctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTa                                                                                    >  1:757745/1‑100 (MQ=255)
          ctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTat                                                                                   <  2:660484/100‑1 (MQ=255)
          ctGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTat                                                                                   >  2:1557556/1‑100 (MQ=255)
           tGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTTAATAATAGAATAAAACGATCGATATCTATTTTat                                                                                   >  1:1670647/1‑99 (MQ=255)
           tGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTatc                                                                                  <  2:703521/100‑1 (MQ=255)
           tGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTatc                                                                                  <  2:1079022/100‑1 (MQ=255)
            gACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTatcg                                                                                 <  1:1303154/100‑1 (MQ=255)
              ctctGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTatcgat                                                                               >  2:1595046/1‑100 (MQ=255)
              ctctGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTatcgat                                                                               >  2:561154/1‑100 (MQ=255)
               tctGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTatcgatc                                                                              <  1:1777317/100‑1 (MQ=255)
                 tGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGt                                                                            >  2:846878/1‑100 (MQ=255)
                 tGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGt                                                                            <  1:1444885/100‑1 (MQ=255)
                 tGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGt                                                                            <  1:1402663/100‑1 (MQ=255)
                  gAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGtt                                                                           <  2:1104136/100‑1 (MQ=255)
                  gAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGtt                                                                           <  2:325547/100‑1 (MQ=255)
                  gAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGtt                                                                           <  2:74096/100‑1 (MQ=255)
                    gTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTta                                                                         >  1:1676242/1‑100 (MQ=255)
                      cTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTtata                                                                       >  2:248482/1‑100 (MQ=255)
                       tGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTatat                                                                      >  2:504832/1‑100 (MQ=255)
                       tGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTatat                                                                      >  2:504394/1‑100 (MQ=255)
                            acaAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATatcgatc                                                                 <  1:1301844/100‑1 (MQ=255)
                                aaGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATa                                                             <  2:749447/100‑1 (MQ=255)
                                  gCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAg                                                           <  1:1766532/100‑1 (MQ=255)
                                   cACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGc                                                          <  1:248480/100‑1 (MQ=255)
                                   cACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGc                                                          <  1:1741459/100‑1 (MQ=255)
                                    aCTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCt                                                         >  2:270832/1‑100 (MQ=255)
                                    aCTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCt                                                         <  1:1349502/100‑1 (MQ=255)
                                     cTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCta                                                        <  1:614654/100‑1 (MQ=255)
                                      tGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCtaa                                                       >  1:906348/1‑100 (MQ=255)
                                       gTTTTCGTTACTTTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCtaat                                                      <  1:1491131/100‑1 (MQ=255)
                                       gTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCtaat                                                      >  1:1864987/1‑100 (MQ=255)
                                        ttttCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCtaata                                                     <  2:1844700/100‑1 (MQ=255)
                                         tttCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATataaacgatc                                                    <  1:340801/100‑10 (MQ=255)
                                         tttCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCtaataa                                                    <  1:1355415/100‑1 (MQ=255)
                                            cGTTACTGTCTCTCTTGTCCTTTCAATAGATCTATTATAGAACAAACCTAGCGATATATATTTTATCGCTCGTTTATCTCGATCGCTAAGCtaataataa                                                 <  1:1198554/100‑1 (MQ=255)
                                              ttACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAAcc                                               <  2:1384000/100‑1 (MQ=255)
                                                aCTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCtt                                             >  2:1939002/1‑100 (MQ=255)
                                                aCTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCtt                                             >  2:1725804/1‑100 (MQ=255)
                                                 cTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACCATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCttt                                            <  1:1246026/100‑1 (MQ=255)
                                                    tctctcTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTc                                         <  2:1327239/100‑1 (MQ=255)
                                                    tctctcTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTc                                         <  2:398128/100‑1 (MQ=255)
                                                    tctctcTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTc                                         <  1:1595035/100‑1 (MQ=255)
                                                     ctctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCa                                        <  1:697570/100‑1 (MQ=255)
                                                     ctctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCa                                        >  2:346483/1‑100 (MQ=255)
                                                     ctctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCa                                        >  2:1727472/1‑100 (MQ=255)
                                                      tctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAg                                       >  2:1942738/1‑100 (MQ=255)
                                                       ctctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGt                                      <  1:352768/100‑1 (MQ=255)
                                                        tctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTa                                     >  2:1891723/1‑100 (MQ=255)
                                                        tctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTa                                     <  1:1474353/100‑1 (MQ=255)
                                                         ctTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTaa                                    >  2:1474361/1‑100 (MQ=255)
                                                           tGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACa                                  >  1:64235/1‑100 (MQ=255)
                                                           tGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACa                                  <  1:2208/100‑1 (MQ=255)
                                                           tGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACa                                  >  1:545777/1‑100 (MQ=255)
                                                           tGTCCGTACACTAACTGAATAGTACAATAAAACGATCGATCTGTATTTTATCACGCGTATATCGCGATGGAAAGGTTATTAATAACCTTTGTCAGCaa                                    >  1:9980/1‑98 (MQ=255)
                                                              ccGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGc                               >  1:182195/1‑100 (MQ=255)
                                                               cGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGca                              >  1:139904/1‑100 (MQ=255)
                                                               cGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGca                              >  2:32694/1‑100 (MQ=255)
                                                               cGTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGca                              >  1:941349/1‑100 (MQ=255)
                                                                gTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGcac                             >  2:40194/1‑100 (MQ=255)
                                                                gTGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGcac                             <  2:1455356/100‑1 (MQ=255)
                                                                 tGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGcaca                            >  2:725983/1‑100 (MQ=255)
                                                                 tGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGcaca                            >  1:1755169/1‑100 (MQ=255)
                                                                 tGCAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGcaca                            <  2:1708545/100‑1 (MQ=255)
                                                                   cAATAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGa                          >  1:1890166/1‑100 (MQ=255)
                                                                     aTAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATa                        <  2:360302/100‑1 (MQ=255)
                                                                     aTAGCTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATa                        >  2:1233523/1‑100 (MQ=255)
                                                                         cTCAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTa                    >  1:1690817/1‑100 (MQ=255)
                                                                           cAATAATAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACa                  <  2:293937/100‑1 (MQ=255)
                                                                            aataatAGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAg                 <  2:1849174/100‑1 (MQ=255)
                                                                             ataataGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGa                >  1:631250/1‑100 (MQ=255)
                                                                                ataGAATAAAACTTTTTATATCTATTTTATTGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAg             <  1:153842/100‑1 (MQ=255)
                                                                                ataGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAg             >  2:1892091/1‑100 (MQ=255)
                                                                                ataGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAg             >  2:49590/1‑100 (MQ=255)
                                                                                ataGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAg             >  1:1015372/1‑100 (MQ=255)
                                                                                  aGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGAc           <  1:1725793/100‑1 (MQ=255)
                                                                                  aGAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGAc           <  1:1727461/100‑1 (MQ=255)
                                                                                   gAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACa          >  1:1521000/1‑100 (MQ=255)
                                                                                   gAATAAAACGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACa          >  1:1220418/1‑100 (MQ=255)
                                                                                       aaaaCGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCa      <  2:1864999/100‑1 (MQ=255)
                                                                                       aaaaCGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCa      >  2:1746028/1‑100 (MQ=255)
                                                                                        aaaCGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAg     >  2:1266552/1‑100 (MQ=255)
                                                                                         aaCGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAgg    <  2:926584/100‑1 (MQ=255)
                                                                                          aCGATCGATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAggg   <  2:1220421/100‑1 (MQ=255)
                                                                                           cgatcgatATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGa  <  1:32694/100‑1 (MQ=255)
                                                                                                |                                                                                              
GATGCCCTCCCTGACTCTGAGTCTGCTCACAAAAGCACTGTTTTCGTTACTGTCTCTCTTGTCCGTGCAATAGCTCAATAATAGAATAAAACGATCAATATCTATTTTATCGATCGTTTATATCGATCGATAAGCTAATAATAACCTTTGTCAGTAACATGCACAGATACGTACAGAAAGACATTCAGGGA  >  NC_000913/2071225‑2071415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: