| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,073,307 | Δ1 bp | 100% | coding (705/1149 nt) | rutA ← | pyrimidine oxygenase, FMN‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,073,305 | 0 | A | . | 96.0% | 427.9 / 9.7 | 101 | coding (707/1149 nt) | rutA | pyrimidine oxygenase, FMN‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (1/3); new base . (51/46); total (52/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.98e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
GTCGGTTTCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGAAAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAG > NC_000913/1073208‑1073400 | gtcgGTTTCATCGGCAATCACCATAAGCAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGaag < 2:716477/100‑2 (MQ=255)gtcgGTTTCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGaag > 2:177256/1‑99 (MQ=255) tttCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGGGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTg < 1:1344771/100‑1 (MQ=255) tCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTggg < 1:1833913/100‑1 (MQ=255) tCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGgtg < 2:1574060/99‑1 (MQ=255) cGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTa > 1:1143213/1‑100 (MQ=255) tCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACg < 2:1074220/100‑1 (MQ=255) tCACCATAAACAACACATAAGAGCCAACGGCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACg < 1:1151953/100‑1 (MQ=255) aCCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGcc > 2:2230970/1‑100 (MQ=255) ccATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCTTCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCt > 2:1643131/1‑100 (MQ=255) ccATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCt > 1:2391202/1‑100 (MQ=255) ccATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCt > 1:2110501/1‑100 (MQ=255) aTAAACCACACATAAGAGCCAACGTCGCGTCCGGTTTGCGCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGTGCG‑AAGCCGCGGGTGTATTTACGCCttt < 2:1184708/100‑1 (MQ=255) aTAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCttt > 1:487412/1‑100 (MQ=255) tAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCttt > 2:1383475/1‑99 (MQ=255) aagcaacaCATAAGAGCCAACGTCGCGTCCGGTTTGCTGTGCGGTCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTGCGCCTTTGc < 2:2307202/97‑1 (MQ=255) aaaCAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGc < 2:2126603/100‑1 (MQ=255) aacaacACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGAAAGCCGTGGGTGTATTTACGCCTTTGc < 2:2395147/100‑1 (MQ=255) aacaacACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGcc > 2:1268087/1‑100 (MQ=255) acaacaCATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCg > 1:678143/1‑100 (MQ=255) caacaCATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGa < 1:814990/100‑1 (MQ=255) acacATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGaaa > 1:912856/1‑100 (MQ=255) acacATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGaaa < 2:144729/100‑1 (MQ=255) cacaTAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAAc < 1:487824/100‑1 (MQ=255) caTAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGAAAGCCGTGGGTGTATTTACGCCTTTGCCGAAACa > 2:2053111/1‑100 (MQ=255) caTAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACa > 1:1296821/1‑99 (MQ=255) caTAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAg > 1:375379/1‑100 (MQ=255) aaGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAg < 1:2076343/100‑1 (MQ=255) aaGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAg > 1:730875/1‑100 (MQ=255) gagCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGtt > 2:926527/1‑100 (MQ=255) agCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGttn < 2:1129336/100‑2 (MQ=255) gCCAACGTCGCGTCCGGTTTGCTCTGCTGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGa < 2:1308202/100‑1 (MQ=255) gCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGa > 2:2454112/1‑100 (MQ=255) gCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGa < 2:2081669/100‑1 (MQ=255) gCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGa < 2:2110487/100‑1 (MQ=255) gCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGa > 1:1850053/1‑100 (MQ=255) gCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGa < 1:2083460/100‑1 (MQ=255) gTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCgg < 1:43065/100‑1 (MQ=255) tCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGc < 2:2214829/100‑1 (MQ=255) cgcgTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCa < 1:1421380/100‑1 (MQ=255) gcgTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCAt < 2:585332/100‑1 (MQ=255) tCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATAcc < 1:2032540/100‑1 (MQ=255) tgTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCggg < 1:1077626/99‑1 (MQ=255) gTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCggga > 2:1077618/1‑99 (MQ=255) gTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGc > 2:1843486/1‑100 (MQ=255) gTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGc > 2:1335880/1‑100 (MQ=255) ttGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCgg > 1:1667571/1‑100 (MQ=255) tGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGga > 1:1575242/1‑100 (MQ=255) tGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGga < 2:606703/100‑1 (MQ=255) tGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGga > 1:969996/1‑100 (MQ=255) gCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGAAAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCgg < 1:2053125/99‑1 (MQ=255) gCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGgag > 2:936168/1‑100 (MQ=255) gCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGgag > 1:86846/1‑100 (MQ=255) ctctGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGgaga > 2:1985559/1‑100 (MQ=255) ctctGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGgaga > 2:1670517/1‑100 (MQ=255) tctGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGaa > 2:833021/1‑100 (MQ=255) tctGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGaa > 1:288014/1‑100 (MQ=255) tctGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGaa > 2:378554/1‑100 (MQ=255) tGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACg < 1:24616/100‑1 (MQ=255) tGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACg > 1:2245435/1‑100 (MQ=255) tGCGGCCTGTGTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAAc < 2:895877/99‑1 (MQ=255) gCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGc < 1:1715676/100‑1 (MQ=255) gCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGc > 2:1891643/1‑100 (MQ=255) tctccTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGcc < 1:1468482/97‑1 (MQ=255) ggCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCa > 2:1921403/1‑100 (MQ=255) gCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCAt < 1:282848/100‑1 (MQ=255) gCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCAt < 1:701133/100‑1 (MQ=255) ccTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCaga > 2:1468471/1‑98 (MQ=255) cTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGGGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCAt > 2:61102/1‑98 (MQ=255) cTGTTTCATCCGCGCAGCGGTCGGGACG‑AAGCCGGGGATGTATTTACGCCGTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCAt > 2:1551073/1‑98 (MQ=255) gTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCa > 2:2320052/1‑100 (MQ=255) tCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCg < 2:2439180/100‑1 (MQ=255) tCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCg > 1:2085385/1‑100 (MQ=255) tCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCg < 1:1129886/100‑1 (MQ=255) tCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCg < 1:2420645/100‑1 (MQ=255) tCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCg < 1:799919/100‑1 (MQ=255) cATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGt > 1:2487764/1‑100 (MQ=255) cATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGt > 1:1755166/1‑100 (MQ=255) cATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGt > 1:610002/1‑100 (MQ=255) ccGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGc < 1:115391/100‑1 (MQ=255) ccGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGc < 2:678136/100‑1 (MQ=255) ccGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGc < 2:1358612/100‑1 (MQ=255) cgcgCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCt > 1:679998/1‑100 (MQ=255) gcggAGCGGTGGGGGCG‑ACGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACTGGGCGGAGAACGCCATGCCa < 2:1569267/91‑1 (MQ=255) gcgcAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCtt > 1:2097335/1‑100 (MQ=255) gcAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACACCATGCCAGCGTCGCTTTg < 1:530582/100‑1 (MQ=255) cAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGc < 1:2497059/100‑1 (MQ=255) cAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGc > 2:2360810/1‑100 (MQ=255) cAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGc > 1:1748637/1‑100 (MQ=255) aGCGGTCGGGGCGAAAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGc < 2:2097270/100‑1 (MQ=255) gggcGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCgg > 2:855335/4‑100 (MQ=255) ggTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCgg > 2:2539790/1‑100 (MQ=255) ggTCGGGGCG‑AAGCCATGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCgg < 1:2525993/100‑1 (MQ=255) cGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGgcgc < 2:745924/100‑1 (MQ=255) cGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGgcgc > 1:686713/1‑100 (MQ=255) ggggCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCa < 2:2475162/100‑1 (MQ=255) gggCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCan < 1:395382/100‑2 (MQ=255) gggCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAg > 1:1086753/1‑100 (MQ=255) gggCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAg > 2:763083/1‑100 (MQ=255) gggCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAg < 1:2377357/100‑1 (MQ=255) | GTCGGTTTCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGAAAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAG > NC_000913/1073208‑1073400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |