| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 584,262:1 | (A)7→8 | 100% | coding (582/750 nt) | appY → | global transcriptional activator; DLP12 prophage |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 584,255 | 1 | . | A | 93.8% | 313.2 / 12.6 | 96 | coding (575/750 nt) | appY | global transcriptional activator; DLP12 prophage |
| Reads supporting (aligned to +/- strand): ref base . (3/3); new base A (47/43); total (50/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 110 total aligned reads displayed.
GGAATTGATTTATACGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAA > NC_000913/584157‑584348 | ggAATTAATTTATACAAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGc < 2:2133425/99‑1 (MQ=255) aaTTGATTTATACGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑aaa > 1:2239388/1‑100 (MQ=255) aTTGATTTATACGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑aaaa < 1:2229181/100‑1 (MQ=255) naTTTATACGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑aaaaaa‑a > 1:944202/2‑100 (MQ=255) gATTTATACGAGTGAAAGTTTAAT‑AAAAAAAAGATTACGGGATGAAGGAACGTCATTTAATGAAATATTGAGAGATACTAGGATGAGGTATGC‑aaaaaa‑a > 2:2557048/1‑100 (MQ=255) gATTTATACGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑aaaaaa‑a > 1:676110/1‑100 (MQ=255) gATTTATACGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑aaaaaa‑a > 2:682484/1‑100 (MQ=255) gATTTATACGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAAAGTCATTTAATGAAATATTGAGAGATAATAGGATGAGGTATGC‑aaaaaa‑a > 2:2170809/1‑100 (MQ=255) tttATACGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑aaaaaa‑aac < 1:1478685/100‑3 (MQ=255) tttAAACGAGTGAAAATTTAAT‑AAAAAAAAGATTAAGCGATGAATGAACTTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGC‑aaaaa < 2:2070205/96‑1 (MQ=255) ttATACGATTGAAAAAAAAAA‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑aaaaa < 2:2005612/95‑1 (MQ=255) ttATACGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑aaaaaa‑aact < 1:489472/100‑4 (MQ=255) ttATACGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑aaaaaa‑aact < 1:1282237/100‑4 (MQ=255) tataCGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑aaaaaa‑aactc > 1:1569146/1‑96 (MQ=255) taCGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCAt > 1:2312526/1‑100 (MQ=255) cGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATaa > 2:764625/1‑100 (MQ=255) cGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATaa > 1:915185/1‑100 (MQ=255) cGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATaa > 1:1355657/1‑100 (MQ=255) cGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATaa > 1:133809/1‑100 (MQ=255) aGTAAAAGTTTAAT‑AAAAAAAAGATTAAGGGTTGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAAc < 1:1502319/99‑1 (MQ=255) gTGAAAGTTTAATAAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGAAACAAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACt > 1:1389284/1‑100 (MQ=255) gTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACtt > 2:1909048/1‑100 (MQ=255) gTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑AAAAAA‑A‑CTCATAACTTc > 1:2042545/1‑100 (MQ=255) tGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTc < 1:463348/100‑1 (MQ=255) aaGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑AAAAAA‑A‑CTCATAACTTCaaa > 2:2531823/1‑99 (MQ=255) aaGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑AAAAAA‑A‑CTCATAACTTCAAAc < 1:2531838/100‑1 (MQ=255) aaGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGAAACAAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCaaa > 2:31122/1‑100 (MQ=255) aGTATAAT‑AAAAAAAAGATTAAGGAATGAATGAACGTCATTTACTAAAATATTGAGAGATACTAGGATGAGGAATGCAAAAAAA‑A‑CTCATAACTTCAAAc < 2:352098/100‑1 (MQ=255) aat‑aaAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTa < 2:1458861/100‑1 (MQ=255) t‑aaAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTa > 1:944928/1‑98 (MQ=255) t‑aaAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTAtt < 2:2409197/100‑1 (MQ=255) t‑aaAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTAtt > 2:1718182/1‑100 (MQ=255) t‑aaAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTAt > 2:2152644/1‑99 (MQ=255) aaaaaaaaGATTAAGGGATGAAGGAACGTCATTTCCTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCGAACACTTATTc < 2:1343018/100‑1 (MQ=255) aaaaaaaaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTc < 1:854788/100‑1 (MQ=255) aaaaaaaaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTc < 1:1452554/100‑1 (MQ=255) aaaaaaaaGATTAAGGGAAGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑AAAAAA‑AGCTCATAACTTCAAACTCTTATTc < 1:2297030/100‑1 (MQ=255) aaaaaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAAGTATAAAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTAt < 2:944920/100‑1 (MQ=255) aaaaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATc > 1:149912/1‑100 (MQ=255) gATTAAGGGATGAAGGAACGTCATTTACTGCAATATTGAGAGATACTAGGATGAGGTATGC‑AAAAAACA‑ATCATAACTTAAAACTCTTATTCTATCAAt > 2:1417448/1‑99 (MQ=255) aTTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGt < 1:1413505/100‑1 (MQ=255) ttAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTc > 1:494240/1‑100 (MQ=255) tAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCg < 1:98651/100‑1 (MQ=255) aaGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGt > 2:792150/1‑100 (MQ=255) aGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTa > 1:1496705/1‑100 (MQ=255) ggATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGc > 1:2299068/1‑100 (MQ=255) ggATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGc > 1:2012257/1‑100 (MQ=255) gATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGcc < 2:37847/100‑1 (MQ=255) gATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGcc > 2:609089/1‑100 (MQ=255) tGAAGGAACGTCATTTACTGAAATATTCAGAGATACTAGGATTCGGTTTGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTCTTCTCTTAATGtatcatacta > 2:1116416/1‑91 (MQ=255) gAATGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTCCAAACTCTTATTCTATAAATGTCGTCGACCa > 2:98376/1‑99 (MQ=255) aGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCa > 2:1226805/1‑97 (MQ=255) ggAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGaaa > 1:1536329/1‑100 (MQ=255) gAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAAt > 2:1092071/1‑100 (MQ=255) gAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAAtg < 2:800486/100‑1 (MQ=255) aaCGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAAtn < 2:72219/100‑2 (MQ=255) cGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAAtgtg < 2:820227/100‑1 (MQ=255) gTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTgg < 2:11746/100‑1 (MQ=255) tCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGc < 1:2555926/100‑1 (MQ=255) tCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGc < 1:80502/100‑1 (MQ=255) tCATTTACTGAAATATTGAGAGATACTAGGATGACGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGc < 2:1886864/100‑1 (MQ=255) cATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCt > 1:173114/1‑100 (MQ=255) tttACTGAAATATTGAGAGATACTAGGATAAAAAAAAAAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCtat < 2:1861371/100‑1 (MQ=255) tACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGCCTATaa > 1:944839/1‑100 (MQ=255) aCTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAAc < 2:1569552/100‑1 (MQ=255) cTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACa > 1:495261/1‑100 (MQ=255) cTGAAATATTGAGAGATACTAGGATGAGGTACGCAAAAAAA‑A‑ATCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACa > 1:1731842/1‑100 (MQ=255) tGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAg < 2:598261/100‑1 (MQ=255) tGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAg < 1:279653/100‑1 (MQ=255) gAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGt > 2:52062/1‑100 (MQ=255) gAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGt > 1:333397/1‑100 (MQ=255) aaaTATTGAGAGATACTAGGATGAGGTATAAAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAAc < 2:1613171/96‑1 (MQ=255) atatTGAGAGATACTAGGATGAAGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACt < 2:2276136/100‑1 (MQ=255) gagagaTACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcata > 1:1052609/1‑100 (MQ=255) gagagaTACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcata > 1:477016/1‑100 (MQ=255) gagagaTACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcata > 2:1692084/1‑100 (MQ=255) agagaTACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatat < 2:823745/100‑1 (MQ=255) gagaTACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatatt < 2:323408/100‑1 (MQ=255) agaTACTAGGAAGAAATAAGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatattt < 1:174501/100‑1 (MQ=255) gaTACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatatttc > 1:541663/1‑100 (MQ=255) aTACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatatttca < 1:764632/100‑1 (MQ=255) aTACTAGAATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGTCTATAACAGTACttcatatttca < 1:2170824/100‑1 (MQ=255) tACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatatttcat > 2:1162453/1‑100 (MQ=255) tACTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatatttcat < 2:431225/100‑1 (MQ=255) cTAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatatttcatat > 1:1439142/1‑100 (MQ=255) tAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATAtg > 1:842128/1‑100 (MQ=255) tAGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATAtg < 1:47688/100‑1 (MQ=255) aGGATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATAtgt > 1:1350440/1‑100 (MQ=255) ggATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATAtgtg > 2:1652507/1‑100 (MQ=255) ggATGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATAATTCATAtgtg > 2:1135870/1‑100 (MQ=255) aTGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCa < 1:2424545/100‑1 (MQ=255) aTGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACGCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCa < 2:2168895/100‑1 (MQ=255) aTGAGATATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATAtgtg < 2:1034217/98‑1 (MQ=255) tGAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCAt < 1:1247859/100‑1 (MQ=255) gAGGTATGCAAAAAAA‑A‑CTCATAACTTCATACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCAt < 2:2179413/99‑1 (MQ=255) gAGGTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCAtt < 1:817541/100‑1 (MQ=255) ggTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCATATTCTATCAATGTTGTAGACCAGAAATGTGGATAAAACAATACTTCATATTTCATAGGTGcct > 2:2103553/1‑95 (MQ=255) gTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTaa < 2:1316461/100‑1 (MQ=255) gTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTaa < 2:661115/100‑1 (MQ=255) gTATGCAAAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTaa > 1:1687392/1‑100 (MQ=255) | GGAATTGATTTATACGAGTGAAAGTTTAAT‑AAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAA > NC_000913/584157‑584348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |