| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4532946 = | 98 (1.070) | 5 (0.060) | 5/166 | NT | 5.3% | coding (238/747 nt) | yjhP | putative methyltransferase |
| ? | NC_000913 | 4532970 = | 86 (1.010) | coding (214/747 nt) | yjhP | putative methyltransferase | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
GGCTCGGGCGAGATGCTCTGCACCTGGGCCAGGGATCATGGCATTACGGGGACTGGCATCGACATGAGTTCGCTCTTCACCGCGCAGGCAAAGCGTCGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4533048‑4532946‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAGAATGC > NC_000913/4532970‑4533068 GGCTCGGGCGAGATGCTCTGCACCTGGGCCAGGGATCATGGCATTACGGGGACTGGCATCGACATGAGTTCGCTCTTCACCGCGCAGGCAAAGCGTCGCG > 1:1050943/1‑100 GCTCGGGCGAGATGCTCTGCACCTGGGCCAGGGATCATGGCATTACGGGGACTGGCATCGACATGAGTTCGCTCTTCACCGCGCAGGCAAAGCGTCGCGC > 2:2501752/1‑100 CTCGGGCGAGATGCTCTGCACCTGGGCCAGGGATCATGGCATTACGGGGACTGGCATCGACATGAGTTCGCTCTTCACCGCGCAGGCAAAGCGTCGCGCG < 1:1306158/100‑1 TCGGGCGAGATGCTCTGCACCTGGGCCAGGGATCATGGCATTACGGGGACTGGCATCGACATGAGTTCGCTCTTCACCGCGCAGGCAAAGCGTCGCGCGG < 1:646522/100‑1 TCGGGCGAGATGCTCTGCACCTGGGCCAGGGATCATGGCATTACGGGGACTGGCATCGACATGAGTTCGCTCTTCACCGCGCAGGCAAAGCGTCGCGCGG < 2:2372786/100‑1 GCTCTTCATCGCGCAGGCAAAGCGTCGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATC > 1:616122/1‑100 CTCTTCACCGCGCAGGCAAAGCGTCGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCT > 1:301289/1‑100 TCTTCACCGCGCAGGCAAAGCGTCGCGCGGTGAAGAGCGAACTCATGTCGATGCAAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTC > 1:677888/1‑100 CTTCACCGCGCAGGCAAAGCGTCGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCG > 1:37662/1‑100 CCGCGCAGGCAAAGCGTCGCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGA > 2:2008517/1‑100 GCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAG < 1:1448811/100‑1 GCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAG < 1:188259/100‑1 GCGCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAG < 2:1836565/100‑1 GCGCGGGGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAG < 1:2214438/100‑1 GCGGTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAGAA > 1:1342321/1‑100 GTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAGAATGC > 1:1840979/1‑100 GGCTCGGGCGAGATGCTCTGCACCTGGGCCAGGGATCATGGCATTACGGGGACTGGCATCGACATGAGTTCGCTCTTCACCGCGCAGGCAAAGCGTCGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4533048‑4532946‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggTGAAGAGCGAACTCATGTCGATGCCAGTCCCCGTAATGCCATGATCCCTGGCCCAGGTGCAGAGCATCTCGCCCGAGCCGCTGCCGAGGTCAAGAATGC > NC_000913/4532970‑4533068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |