New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4632232	90 (0.990)	5 (0.060)	4/170	NT	5.5%	coding (1500/1938 nt)	slt	lytic murein transglycosylase, soluble
	?	NC_000913	= 4632249	87 (1.000)					coding (1517/1938 nt)	slt	lytic murein transglycosylase, soluble
Rejected: Frequency below cutoff threshold.

GAAGCTGTGGGATCATCTGGAAGAGCGATTCCCGCTGGCTTACAACGATCTTTTCAAACGCTACACCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4632130‑4632232 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCGGGAATCGCTC  <  NC_000913/4632249‑4632152                                                                                                                                                                                                           GAAGCTGTGGGATCATCTGGAAGAGCGATTCCCGCTGGCTTACAACGATCTTTTCAAACGCTACACCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATG                                                                                                       <  2:1989785/100‑1  AAGCTGTGGGATCATCTGGAAGAGCGATTCCCGCTGGCTTACAACGATCTTTTCAAACGCTACACCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGG                                                                                                      <  1:1163948/100‑1    GCTGTGGGATCATCTGGAAGAGCGATTCCCGCTGGCTTACAACGATCTTTTCAAACGCTACACCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCG                                                                                                    <  1:932686/100‑1                            ATTCCCGCTGGCTTACAACGATCTTTTCAAACGCTACACCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCGCTCTCCTGACGAGCAATCGCCATC                                                                            <  1:1421035/100‑1                             TTCCCGCTGGCTTACAACGATCTTTTCAAACGCTACACCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCGCTCTCCTGACGAGCAATCGCCATCG                                                                           <  1:9071/100‑1                               CCCGCTGGCTTACAACGATCTTTTCAAACGCTACACCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCGCTCTCCTGACGAGCAATCGCCATCGCA                                                                         <  1:1905773/100‑1                                                            GCTACACCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCGCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGT                                            <  1:1082558/100‑1                                                            GCTACACCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCGCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGT                                            <  1:1082705/100‑1                                                                                                    GGCGCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCGGGAATCGC    >  1:1698239/1‑100                                                                                                    GGCGCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCGGGAATCGC    <  1:1702743/100‑1                                                                                                     GCGCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCGGGAATCGCT   >  1:575235/1‑100                                                                                                      CGCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCGGGAATCGCTC  <  1:2236935/100‑1                                                                                                                                                                                                           GAAGCTGTGGGATCATCTGGAAGAGCGATTCCCGCTGGCTTACAACGATCTTTTCAAACGCTACACCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4632130‑4632232 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCGGGAATCGCTC  <  NC_000913/4632249‑4632152

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.