New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 38520568 (0.750)19 (0.230) 7/162 NT 21.7% intergenic (‑589/‑27) yaiS/tauA putative PIG‑L family deacetylase/taurine ABC transporter periplasmic binding protein
?NC_000913 = 385217 75 (0.900)intergenic (‑601/‑15) yaiS/tauA putative PIG‑L family deacetylase/taurine ABC transporter periplasmic binding protein

TTGCATATTTAATCTTTCCTTAGCCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/385099‑385205
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctcccCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAAACGGCTA  <  NC_000913/385217‑385119
                                                                                                                                                                                                              
TTGCATATTTAATCTTTCCTTAGCCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATAC                                                                                                            >  2:268221/1‑100
 TGCATATTTAATCTTTCCTTAGCCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACT                                                                                                           >  1:1829317/1‑100
  GCATATTTAATCTTTCCTTAGCCGTTTTTTTTTTTATTTTAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATTCT                                                                                                           >  2:90333/1‑99
  GCATATTTAATCTTTCCTTAGCCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTG                                                                                                          >  1:2193595/1‑100
   CATATTTAATCTTTCCTTAGCCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGC                                                                                                         <  1:1352139/100‑1
    ATATTTAATCTTTCCTTAGCCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCT                                                                                                        <  2:824662/100‑1
     TATTTAATCTTTCCTTAGCCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTC                                                                                                       >  1:884649/1‑100
       TTTAATCTTTCCTTAGCCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCC                                                                                                     <  2:1216707/100‑1
       TTTAATCTTTCCTTAGCCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCC                                                                                                     >  2:2458201/1‑100
        TTAATCTTTCCTTAGCCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCn                                                                                                    <  1:72058/100‑2
                      GCCGTTATTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGG                                                                                      <  2:2074940/100‑1
                         GTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGC                                                                                   <  2:2287676/100‑1
                           TTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTGCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAG                                                                                 <  2:221420/100‑1
                           TTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAG                                                                                 <  1:374634/100‑1
                           TTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAG                                                                                 <  1:276177/100‑1
                           TTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAG                                                                                 <  1:1870619/100‑1
                           TTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAG                                                                                 <  2:2427006/100‑1
                           TTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAG                                                                                 <  2:606593/100‑1
                           TTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAG                                                                                 <  1:2083537/100‑1
                            cttccgatctGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAGT                                                                                <  2:1948804/90‑1
                            TTTTTGGTAAGAATAAGATCATCTGTGCGATAACGACTAACTCTTTTCATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAGT                                                                                <  2:2340772/100‑1
                            TTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAGT                                                                                <  1:898956/100‑1
                            TTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAGT                                                                                <  2:1353750/100‑1
                                  CTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAGTATTCAG                                                                          <  1:569322/100‑1
                                  CTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAGTATTCAG                                                                          <  1:815511/100‑1
                                    AAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAGTATTCAGGA                                                                        <  2:2325780/100‑1
                                     AGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAGTATTCAGGA                                                                        <  1:1244324/99‑1
                                      GAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCCCTGTCTTGTTATGGGAGCAGTAgatcggaag                                                                      >  1:1948818/1‑91
                                                    GTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCACTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTA                                                        <  2:1829303/100‑1
                                                                                                   CTGCTCCCCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAA         >  1:2190212/1‑100
                                                                                                    TGCTCCCCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAAA        >  1:755123/1‑100
                                                                                                     GCTCCCCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAAAC       >  2:2206040/1‑100
                                                                                                     GCTCCCCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAAAC       >  2:325299/1‑100
                                                                                                      CTCCCCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAAACG      <  2:1393605/100‑1
                                                                                                       TCCCCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAAACGG     >  2:47173/1‑100
                                                                                                        CCCCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAACAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAAA        >  2:414101/1‑96
                                                                                                        CCCCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAAACGGC    >  2:1454796/1‑100
                                                                                                        CCCCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAAACGGC    <  1:1379903/100‑1
                                                                                                        CCCCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAAACGGC    >  1:2092910/1‑100
                                                                                                          CCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAAACGGCTA  >  2:2109126/1‑100
                                                                                                          CCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAAACGGCTA  >  2:1896284/1‑100
                                                                                                                                                                                                              
TTGCATATTTAATCTTTCCTTAGCCGTTTTTTTGCTAAGAATAAAATCATCTGTGCGATAACGACTAATTCTTTTAATGAATGTTTTTATTCCTGAATACTGCTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/385099‑385205
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctcccCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCGCACAGATGATTTTATTCTTAGCAAAAAAACGGCTA  <  NC_000913/385217‑385119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.