| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 1,293,196 | IS5 (+) +4 bp | 100% | intergenic (‑274/‑328) | hns ← / → tdk | global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1293196 = | 1 (0.010) | 62 (0.680) | 47/178 | NT | 98.3% | intergenic (‑274/‑331) | hns/tdk | global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
| ? | NC_000913 | = 1300693 | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1293199 | 1 (0.010) | 67 (0.730) | 52/178 | NT | 98.5% | intergenic (‑277/‑328) | hns/tdk | global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
| ? | NC_000913 | 1299499 = | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
GATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1293102‑1293199‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG > NC_000913/1299499‑1299597 GATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGG > 2:1840023/1‑100GATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGG < 1:2069359/100‑1 TGATTTTGCAGCACGGGAGGTTAAAACTTCCTTATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAA < 1:647248/100‑1 TGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAA < 1:963476/100‑1 TTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTG < 1:2037429/100‑1 TCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGC < 2:33099/100‑1 cgaAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAATTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTTTATTAGGGAAG > 2:502747/4‑95 CGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCG > 1:427943/1‑100 GCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGA > 2:67276/1‑100 CAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAA > 1:1903430/1‑100 AGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAAC < 1:492083/100‑1 GTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTC < 2:884051/100‑1 TGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCC < 1:2414317/100‑1 TGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGCGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACA < 2:510061/95‑1 GAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCgc < 1:1724561/100‑3 AGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTGCCT < 1:914050/100‑1 GGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTG < 2:1746715/100‑1 GGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTG < 1:2458347/100‑1 GTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGA > 1:2511884/1‑100 TTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGAT < 1:854797/100‑1 TTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGAT < 2:2225018/100‑1 TTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGAT > 2:982042/1‑100 TTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGAAGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGAT > 1:164792/1‑100 TAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATA > 2:168144/1‑100 AACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGA < 1:1370997/100‑1 ACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAG < 1:152535/100‑1 CTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGA > 1:1140528/1‑100 TTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGAT < 1:944789/100‑1 CTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCAT > 2:1548859/1‑100 CTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCAT > 1:800589/1‑100 TTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTT > 1:1159695/1‑100 TCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTG < 2:1903416/100‑1 CATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTGCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTG < 2:348116/99‑1 ATGTGACATTTTATGGGGAGGTTATCGTAGGCTGACGACCTTTCAGTCTTCTGGATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGg < 2:800855/99‑2 ATGTCACATTTTATGGGTAGATTATCGTAGAGTGACGACCTTTCAGTCTTCTGTATTTGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTG < 2:1771952/98‑1 ATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC > 1:2536256/1‑100 TGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA < 1:149872/100‑1 GTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCAT > 2:854511/1‑100 ACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTG > 1:1075630/1‑100 CATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGG < 2:1892048/100‑1 ATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGA < 2:1418255/100‑1 TTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGC < 1:59339/100‑1 TATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCA < 1:819379/100‑1 TATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCA < 1:1552426/100‑1 TGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATA < 1:1367074/100‑1 TGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATA > 2:1149560/1‑100 TGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATA < 1:1469464/100‑1 GGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTACGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA > 2:1210034/1‑100 GAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAAC < 1:608623/100‑1 GATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAG > 2:1294368/1‑100 TATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGT < 1:1412280/100‑1 CGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATATAACCGGGTTCA < 2:1339724/100‑1 CGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCA < 1:2282316/100‑1 TAGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATC < 2:2052480/100‑1 AGGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCA < 2:1075622/100‑1 GGCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCAT < 1:1958679/100‑1 GCTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCAT < 2:1888579/99‑1 CTGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCAACTGGAGCCATAGAACAGGGTTCATCATGA > 2:192480/1‑100 TGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAG > 1:29274/1‑100 TGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAG < 1:982050/100‑1 TGACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAG < 1:8300/100‑1 GACGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGT > 2:50992/1‑100 CGACCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCA < 1:2548747/100‑1 CCTTTCAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCA < 2:1074029/100‑1 CAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTA < 1:2204415/100‑1 CAGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATACAACAGGGTTCATCATGAGTCATCAACTTA > 2:1194708/1‑100 AGTCTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGAGCATGTTTGTCATCTGAAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTAC < 2:542257/100‑1 CTTCTGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGGTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTCACCTT > 2:1566438/1‑100 TGTATTAGGTAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCC < 2:312257/100‑1 TGTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCC < 2:559804/100‑1 GTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCG > 1:1226103/1‑100 GTATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCG > 1:215471/1‑100 ATTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC < 1:1149568/100‑1 GGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG > 2:1284730/1‑100 GATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1293102‑1293199‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG > NC_000913/1299499‑1299597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |