| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2900530 | 76 (0.830) | 13 (0.160) | 6/156 | NT | 15.7% | intergenic (‑257/‑62) | ygcW/yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein |
| ? | NC_000913 | = 2900548 | 73 (0.910) | intergenic (‑275/‑44) | ygcW/yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein | |||||
ATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTGCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2900421‑2900530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagaaaagtaaGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTCTCTAGTAATTGAAATAATAAATAACATGGAAAGCAGAGGTGTTGTGTGAGAGTAATCACGCTTCT < NC_000913/2900548‑2900450 ATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTG < 1:741985/100‑1ATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTG < 1:400887/100‑1 TTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGA < 1:2261334/100‑1 TCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAG < 2:1862466/100‑1 TCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAG < 1:1968583/100‑1 CGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGA < 1:1695310/100‑1 CGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGA > 1:1779846/1‑100 TATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAA < 1:609524/100‑1 TATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAA < 2:1389765/100‑1 TATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAA > 1:2038232/1‑100 TATTGTCAAATAATTGTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAA < 1:2518437/100‑1 TTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCCATTACTAGAGACCTGAGAAAAG < 1:1759755/100‑1 TTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAG < 1:1920486/100‑1 GTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTA > 1:2212756/1‑100 GTCAAATAATTTTAAAAAGCAGAAGCGTGAGTACTCTCACACAACACCCCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGT < 2:1791378/99‑1 GATTACTCTCACACAACACCTCTTCTTTCCATGTTATTAATTATTTCAATTACTAGAGTCCTGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTC < 2:1392291/100‑1 TTACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC < 2:453185/100‑1 TTACTCTCACACAACACCTCTTCTTGCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC < 2:571744/100‑1 TACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCA < 1:1699450/100‑1 TACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCA < 1:579125/100‑1 TACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAAGCCACCCTTTCAGGTGGATTACTTTTCTCA < 1:955425/100‑1 ACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAATAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAG < 1:1806705/100‑1 ACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAG < 1:1563387/100‑1 ACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAG < 1:824216/100‑1 ACTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAG < 1:1563455/100‑1 CTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAGG < 1:43710/100‑1 CTCTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAGG < 1:1871012/100‑1 CTCACACAACACCTCTTCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTC < 1:728123/100‑1 aaaaattGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTCTCTAGTAATTGAAATAATAAATAACATGGAAAGAAGAGGTGTTGTGTGAt < 2:1827945/93‑2 GAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTCTCTAGTAATTGAAATAATAAATAACATGGAAAGAAGAGGTGTTGTGTGAGAGTAA > 2:1915912/1‑100 GAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTCTCTAGTAATTGAAATAATAAATAACATGGAAAGAAGAGGTGTTGTGTGAGAGTAATC > 2:1953428/1‑100 AAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTCTCTAGTAATTGAAATAATAAATAACATGGAAAGAAGAGGTGTTGTGTGAGAGTAATCA > 2:2064699/1‑100 AAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTCTCTAGTAATTGAAATAATAAATAACATGGAAAGAAGAGGTGTTGTGTGAGAGTAATCAC < 2:2352776/100‑1 AAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTCTCTAGTAATTGAAATAATAAATAACATGGAAAGAAGAGGTGTTGTGTGAGAGTAATCAC > 1:1053436/1‑100 AAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTCTCTAGTAATTGAAATAATAAATAACATGGAAAGAAGAGGTGTTGTGTGAGAGTAATC > 1:677560/1‑98 GTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTCTCTAGTAATTGAAATAATAAATAACATGGAAAGAAGAGGTGTTGTGTGAGAGTAATCACGCT > 1:2333434/1‑100 GTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTCTCTAGTAATTGAAATAATAAATAACATGGAAAGAAGAGGTGTTGTGTGAGAGTAATCACGCT > 2:35559/1‑100 GTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTCTCTAGTAATTGAAATAATAAATAACATGGAAAGAAGAGGTGTTGTGTGAGAGTAATCACGCT > 2:713270/1‑100 AGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTCTCTAGTAATTGAAATAATAAATAACATGGAAAGAAGAGGTGTTGTGTGAGAGTAATCACGCTTCT > 1:2276838/1‑100 ATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTGCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2900421‑2900530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagaaaagtaaGCCGCCCTTTCAGGTGGATTACTTTTCTCAGGTCTCTAGTAATTGAAATAATAAATAACATGGAAAGCAGAGGTGTTGTGTGAGAGTAATCACGCTTCT < NC_000913/2900548‑2900450 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |