New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3622466 =	NA (NA)	16 (0.180)	8/170	NT	39.2%	coding (3275/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	3622497 =	26 (0.280)					coding (3306/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

TCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGggaa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3622564‑3622466 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  >  NC_000913/3622497‑3622599                                                                                                                                                                                                            TCAGGCCGCACGATGCCAGCCAGCGGTGGCGTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGTCGAGCATCTGCACCAGCACCGGCGG                                                                                                        <  2:425344/100‑1  CAGGCCGCACGGTGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  2:2514316/100‑1  CAGGCCGCACGGTGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  1:13291/100‑1  CAGGCCGCACGGTGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  1:1525762/100‑1  CAGGCCGCACGGTGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  1:1595433/100‑1  CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  2:942911/100‑1  CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       >  2:1777279/1‑100  CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  2:2036833/100‑1  CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       >  1:795783/1‑100  CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  1:1981979/100‑1  CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       >  1:2051222/1‑100   tccgatctCGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGA                                                                                                      <  1:1782531/92‑1   AGGCCGCACGGTGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGA                                                                                                      >  1:1851512/1‑100   AGGCCGCACGGTGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGA                                                                                                      <  2:2437436/100‑1   AGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGA                                                                                                      >  1:2053822/1‑100   AGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGA                                                                                                      <  2:1314736/100‑1   AGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGA                                                                                                      >  1:2158705/1‑100   AGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGA                                                                                                      <  1:241611/100‑1   AGGCCGCACGATGCCAGCCAGCGGCGGCTTCCTTCCCTCACCCGATCAGCCAGGATTTCACTTTCCATCCGGTCGATCATCTGCACCAGCACCGGCGGG                                                                                                       <  2:1109799/99‑1    GGCCGCACGGTGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     >  1:2446574/1‑100    GGCCGCACGGTGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     <  1:1248955/100‑1    GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     >  1:801685/1‑100    GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     >  2:297000/1‑100    GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     >  2:773216/1‑100    GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     >  1:1582989/1‑100    GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGAGGGAA                                                                                                     >  1:717892/1‑100     GCCGCACGATGCCAGCCAGCGGCGTCTTTCCGCACTCACCCGGTCAGCCAGGATTTCACTTGCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     <  2:2516877/99‑1     GCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  2:2010582/97‑1           CGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAgatcgga                                                                                              >  2:1782518/1‑93                                                   GCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACC‑GTGCCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTG                                                     >  1:2313384/1‑100                                                             CACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGC                                            >  1:596768/1‑100                                                              ACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCCTCGTGCG                                           >  2:1297018/1‑100                                                              ACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCG                                           >  1:1971722/1‑100                                                              ACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCG                                           >  2:1142032/1‑100                                                               CTTTTCAGTCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGG                                          >  1:507736/1‑100                                                               CTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCG                                           >  2:641707/1‑99                                                               CTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGG                                          >  1:1294091/1‑100                                                               CTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGG                                          >  2:1622909/1‑100                                                               CTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGG                                          >  1:2138477/1‑100                                                                TTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGC                                         >  1:1451746/1‑100                                                                 TTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCC                                        >  2:949830/1‑100                                                                  TCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCT                                       >  1:945829/1‑100                                                                   CCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTG                                      >  2:479543/1‑100                                                                   CCAGCCGGTCGAGCATCTGCACC‑GTGCCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGA                                     >  2:530273/1‑100                                                                   CCAGCCGGTCGAGCATCTGCACC‑GTGCCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGA                                     >  2:47926/1‑100                                                                                                     GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCACCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGG    <  1:2430619/100‑1                                                                                                     GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCACCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGG    <  1:1767362/100‑1                                                                                                     GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCACCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGG    <  2:968177/100‑1                                                                                                       AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  <  2:17623/100‑1                                                                                                       AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  <  1:607993/100‑1                                                                                                       AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  <  1:2389899/100‑1                                                                                                       AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCACCGCTGGCTGGCACCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  <  1:1957061/100‑1                                                                                                                                                                                                            TCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGggaa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3622564‑3622466 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  >  NC_000913/3622497‑3622599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.