New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4326350NA (NA)10 (0.120) 6/164 NT NA noncoding (549/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 = 4326380 NA (NA)noncoding (579/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 190 total aligned reads displayed.

GCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTC  >  NC_000913/4326251‑4326449
                                                                                                   |                                                                                                   
gCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGtt                                                                                                     >  1:2333555/1‑100 (MQ=255)
gCCGGATAAGGCGTTTACGCCGCATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGtt                                                                                                     >  2:396282/1‑100 (MQ=14)
   ggATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgcc                                                                                                  <  2:2441040‑M1/100‑4 (MQ=255)
   ggATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgcc                                                                                                  >  2:1847181‑M1/1‑97 (MQ=255)
   ggATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCCGGCAACGGTgcc                                                                                                  <  1:2097689‑M1/100‑4 (MQ=255)
       gcggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGCCGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggat                                                                                              <  2:1399894‑M1/100‑8 (MQ=255)
       gcggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGCGGGCACCGTTgccgga                                                                                               >  2:2420603‑M1/1‑93 (MQ=255)
         ggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATgc                                                                                            >  1:52559/1‑100 (MQ=255)
         ggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATgc                                                                                            >  1:1361659/1‑100 (MQ=255)
         ggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGCTGGCACCGTTGCCGGATgc                                                                                            >  2:538290/1‑100 (MQ=17)
          gcgTAAACGCCTTATCCGGCCTACGGATGGTGCGAGAAATTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGCTGGCACCGTTgccg                                                                                                 >  2:2315884‑M1/1‑90 (MQ=255)
          gcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCCGGCAACGGTGCCAGATgcc                                                                                           <  1:20919/100‑2 (MQ=11)
           cgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggat                                                                                              <  2:591135‑M1/96‑8 (MQ=255)
           cgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATgcgg                                                                                          >  2:603929/1‑100 (MQ=255)
             tAAACGCCTTTTCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATgcggcg                                                                                        <  1:441205/100‑1 (MQ=255)
             tAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATgcggcg                                                                                        >  1:2380508/1‑100 (MQ=255)
               aaCGCCTTATCCGGCCTACGGAGGGTGTGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGcgcg                                                                                      <  2:1931008/100‑1 (MQ=255)
               aaCGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGcgcg                                                                                      >  1:1265659/1‑100 (MQ=255)
               aaCGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGcgcg                                                                                      >  2:831363/1‑100 (MQ=255)
                  gCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAgc                                                                                   >  1:1417614/1‑100 (MQ=255)
                   ccTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAgcg                                                                                  <  1:2499501/100‑1 (MQ=255)
                     ttATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGcc                                                                                <  1:2314688/100‑1 (MQ=255)
                      tATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCTCATCAGGCATCTGGCACCGTTGCCGGATgcggcgtaaacgcct                                                                               >  1:616812/1‑91 (MQ=11)
                         ccGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGTAAGCGCCTTAT                                                                            <  2:1832648‑M2/100‑1 (MQ=255)
                           ggCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCC                                                                          <  1:1987341‑M2/100‑1 (MQ=255)
                            gCCTACGGGGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTTGGCACCGTTGCCGGATGCGGCGCGAGCGCCt                                                                               <  2:1593475/94‑1 (MQ=255)
                              ctgcGGAGCGTGCGGGAATTCGTAGGCCTGATAAGACGCGCGAGCGCCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATc                                                                           <  2:2366350/93‑1 (MQ=17)
                              cTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGC                                                                       >  2:31062‑M2/1‑100 (MQ=255)
                              cTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTgccggataaggcgtttacgccgcatccggc                                                                       >  1:2120900‑M1/1‑70 (MQ=255)
                               tACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCt                                                                      <  1:1746283/100‑1 (MQ=255)
                               tACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGC                                                                       <  2:2112635‑M2/99‑1 (MQ=255)
                               tACGGAGGGTGCGGGAATTTGTAGGCCTGATAACACGCGCAAGCGTCGCATCAGGCAGCTGGCACCGTTGCCGGGTGCGGCGTGAAGGCCTTATCCGG                                                                        <  2:1534555‑M2/98‑1 (MQ=255)
                                aCGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCt                                                                      <  2:1128552/99‑1 (MQ=255)
                                  ggAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccggcaacg                                                                   <  1:1184803‑M1/100‑35 (MQ=255)
                                  ggAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAc                                                                   >  2:558359/1‑100 (MQ=255)
                                      ggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccggcaacggtgc                                                               <  1:15345‑M1/100‑39 (MQ=255)
                                        tGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATca                                                             <  2:2534989/100‑1 (MQ=255)
                                        tGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATca                                                             <  2:840856/100‑1 (MQ=255)
                                        tGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATc                                                              <  2:1329891/99‑1 (MQ=255)
                                         gCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTCCCGATcac                                                            >  2:854533/1‑100 (MQ=255)
                                         gCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcac                                                            <  2:2123020/100‑1 (MQ=255)
                                         gCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcac                                                            <  1:831370/100‑1 (MQ=255)
                                         gCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcac                                                            >  2:1062817/1‑100 (MQ=255)
                                           gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaa                                                          <  1:1571702/100‑1 (MQ=255)
                                           gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaa                                                          >  2:1752054/1‑100 (MQ=255)
                                           gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaa                                                          >  2:1220896/1‑100 (MQ=255)
                                           gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaa                                                          >  1:1192920/1‑100 (MQ=255)
                                           gggAATCTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcac                                                            <  2:15794/98‑1 (MQ=255)
                                            ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTGGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaat                                                         >  2:1693940/1‑100 (MQ=255)
                                            ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaat                                                         >  2:1095248/1‑100 (MQ=255)
                                              tctccgTAGGCCGGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaatac                                                       <  2:343179/95‑1 (MQ=255)
                                              aaTTTGTAGGCCTGATAAGACGCGCAGGCGTCGCATCAGGCATCTTGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaatac                                                       <  2:711108/100‑1 (MQ=255)
                                              aaTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaatac                                                       <  1:924775/100‑1 (MQ=255)
                                              aaTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaatac                                                       <  1:2534027/100‑1 (MQ=255)
                                                tttGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaatacaa                                                     <  1:1703251/100‑1 (MQ=255)
                                                  tGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGCAAACGCCTTATCCGGCTTACCGATCACAATACAATc                                                   <  2:638379/100‑1 (MQ=14)
                                                   gTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccggcaacggtgccagatgcctgatg                                                  <  2:356162‑M1/100‑52 (MQ=255)
                                                    tAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAg                                                 >  2:458932/1‑100 (MQ=255)
                                                     aGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGt                                                <  1:1084099/100‑1 (MQ=255)
                                                      ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGtt                                               >  1:1002115/1‑100 (MQ=255)
                                                              aaGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTca                                       <  2:369676/100‑1 (MQ=255)
                                                              aaGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTca                                       <  1:599388/100‑1 (MQ=255)
                                                               cgatctgcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcac                                      <  1:122818/94‑1 (MQ=255)
                                                               aGACGCGCAAGCGTCGCAGTAGGCAGCTGGGACCGTTGCCGGATGCGGCGCGATCGCCTTATCCTTCTTACCGATCCCAATACATTCATTTCTTTTTcac                                      <  2:2549222/100‑1 (MQ=21)
                                                                gACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcaca                                     >  1:547880/1‑100 (MQ=255)
                                                                gACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcaca                                     <  1:1901718/100‑1 (MQ=255)
                                                                gACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACGGATCACGATACAATCAGTTCTTTTTcaaa                                     >  2:2188052/1‑98 (MQ=14)
                                                                    cgcAAGCGTCGCATCAGGCAGCTGGCACCGTTGCCGGATGCGGCGTAAGCGCCTTATCCGGCCTACCGATCACACGACAATCAGTTCTCTTTCACAAAc                                  >  2:439263/1‑99 (MQ=17)
                                                                     gcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcacagatcg                                >  2:122816/1‑95 (MQ=255)
                                                                      cAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCa                               <  1:324953/100‑1 (MQ=255)
                                                                      cAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCa                               >  1:1135269/1‑100 (MQ=255)
                                                                      cAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCa                               <  2:1994663/100‑1 (MQ=255)
                                                                       aaGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAg                              >  2:72896/1‑100 (MQ=255)
                                                                         gCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGAt                            >  1:1015847/1‑100 (MQ=255)
                                                                         gCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGAt                            <  2:2231962/100‑1 (MQ=255)
                                                                          cGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGAtt                           >  1:215071/1‑100 (MQ=255)
                                                                            tCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTc                         <  1:23522/100‑1 (MQ=255)
                                                                             cGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCa                        >  1:210986/1‑100 (MQ=255)
                                                                             cGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCa                        <  1:534367/100‑1 (MQ=255)
                                                                               cATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGt                      >  2:1113762/1‑100 (MQ=255)
                                                                                 tCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGttt                    <  1:97394/100‑1 (MQ=255)
                                                                                 tCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGttt                    <  2:2512561/100‑1 (MQ=255)
                                                                                  cAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTc                   >  1:785250/1‑100 (MQ=255)
                                                                                    ggCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCAt                 >  1:1308094/1‑100 (MQ=255)
                                                                                    ggCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCAt                 >  1:812464/1‑100 (MQ=255)
                                                                                       agtcggCACCGTTGCCGGATGCGGCGTGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCgg              <  1:1854752/96‑1 (MQ=255)
                                                                                       aTCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCgg              <  2:22490/100‑1 (MQ=255)
                                                                                       aTCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACCCAGATTTCAGTTTCATCgg              <  1:2182181/100‑1 (MQ=255)
                                                                                        tCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGa             <  1:2188305/100‑1 (MQ=255)
                                                                                         cTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAc            <  2:2298001/100‑1 (MQ=255)
                                                                                          tGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAcc           <  1:2281267/100‑1 (MQ=255)
                                                                                          tGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAcc           <  2:261061/100‑1 (MQ=255)
                                                                                           ggCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCa          >  1:2372123/1‑100 (MQ=255)
                                                                                             cACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCctacggtgccgactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcacc        <  1:1032566‑M2/100‑64 (MQ=255)
                                                                                              aCCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCataa       >  2:1308894/1‑97 (MQ=255)
                                                                                               ccGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCaaac       <  1:343771/99‑2 (MQ=255)
                                                                                                cGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAAcc     <  2:1775481/100‑1 (MQ=255)
                                                                                                 gTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccg    <  1:1474963‑M2/100‑68 (MQ=255)
                                                                                                 gTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccg    <  1:898479‑M2/100‑68 (MQ=255)
                                                                                                  ttGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgt   <  1:641544‑M2/100‑69 (MQ=255)
                                                                                                   |                                                                                                   
GCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTC  >  NC_000913/4326251‑4326449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.