New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4344813 =NA (NA)12 (0.150) 7/160 NT NA intergenic (+23/+116) melB/yjdF melibiose:sodium symporter/DUF2238 family inner membrane protein
?NC_000913 4344842 = NA (NA)noncoding (28/95 nt) RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 129 total aligned reads displayed.

ATAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATC  >  NC_000913/4344714‑4344912
                                                                                                   |                                                                                                   
aTAAATATCGTAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGATAGCCTGACGTGGACAATAGCTAACGAAAAt                                                                                                     <  2:1681147/100‑1 (MQ=255)
aTAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAAt                                                                                                     <  1:1516902/100‑1 (MQ=255)
 taaccggataacaacttgcgctttgttgatgccggatgcggcgtgaatttcttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTg                                                                                                    >  1:1504678‑M1/99‑100 (MQ=255)
 taaccggataacaacttgcgctttgttgatgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTg                                                                                                    <  1:1585882‑M1/2‑1 (MQ=255)
 taaccggataacaacttgcgctttgttgatgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTg                                                                                                    >  1:780300‑M1/99‑100 (MQ=255)
 tAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTTGACAATAGCTAACGAAAATg                                                                                                    <  2:1561773/100‑1 (MQ=255)
  aaccggataacaacttgcgctttgttgatgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTgg                                                                                                   >  1:1765224‑M1/98‑100 (MQ=255)
   accggataacaacttgcgctttgttgatgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagccgTGGc                                                                                                  <  1:716887‑M1/4‑1 (MQ=255)
   accggataacaacttgcgctttgttgatgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGc                                                                                                  >  2:2536265‑M1/97‑100 (MQ=255)
   accggataacaacttgcgctttgttgatgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGc                                                                                                  <  1:2005536‑M1/4‑1 (MQ=255)
   accggataacaacttgcgctttgttgatgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGc                                                                                                  >  1:1121879‑M1/97‑100 (MQ=255)
   accggataacaacttgcgctttgttgatgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGc                                                                                                  <  1:2296854‑M1/4‑1 (MQ=255)
   aaTATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGc                                                                                                  <  2:405169/100‑1 (MQ=255)
    atatCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGcc                                                                                                 <  1:92675/100‑1 (MQ=255)
    atatCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAATGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGcc                                                                                                 >  2:1642089/1‑100 (MQ=255)
     tatCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCt                                                                                                <  2:2281457/100‑1 (MQ=255)
        cGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGAt                                                                                             >  1:2548188/1‑100 (MQ=255)
        cGCAAAATACCGCCCGAGCCTGTTGATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTTGACAATAGCTAACGAAAATGGCCTGAt                                                                                             <  1:2162702/100‑1 (MQ=255)
         gCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATg                                                                                            >  2:149123/1‑100 (MQ=255)
          cAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGc                                                                                           <  2:1648357/100‑1 (MQ=255)
            caacttgcgctttgttgatgccggatgcggcgtgaattccttatccggtctacaaaatttgcacatccaaagcattaccttaagacgTGGACtgatcaa                                                                                          <  1:1753947‑M1/12‑4 (MQ=255)
             aGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGGCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGat                                                                                        <  2:1708577/100‑1 (MQ=255)
              gTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGata                                                                                       <  2:1991108/100‑1 (MQ=255)
                aCCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGGGAGTGATGTGAAAGCCTGACGTGGACAATCGCGAACGAAAATGGCCGGATGGGGTATg                                                                                     >  2:1562663/1‑100 (MQ=255)
                  cGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGCGTGATGTGAAAGCGTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGt                                                                                    >  2:2027929/1‑99 (MQ=255)
                   gCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGttt                                                                                  <  2:824166/100‑1 (MQ=255)
                   gCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGttt                                                                                  >  1:1249714/1‑100 (MQ=255)
                    cccGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTTATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGtt                                                                                   <  2:1809942/98‑1 (MQ=255)
                      cGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATc                                                                               <  1:1752696/100‑1 (MQ=255)
                      cGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATc                                                                               <  1:1640259/100‑1 (MQ=255)
                      cGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATc                                                                               >  1:45658/1‑100 (MQ=255)
                       gAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCa                                                                              <  1:705161/100‑1 (MQ=255)
                         gCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAgg                                                                            <  2:310536/100‑1 (MQ=255)
                          ttgatgccggatgcggcgtgaattccttatccggtctacaaaagttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGc                                                                           >  2:347614‑M1/74‑100 (MQ=255)
                          ccTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGc                                                                           <  1:477081/100‑1 (MQ=255)
                           tgatgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGcc                                                                          >  1:2284581‑M1/73‑100 (MQ=255)
                           tgatgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacagtaagacgTGGCCTGATGCGATATGTTTATCAGGcc                                                                          >  2:356917‑M1/73‑100 (MQ=255)
                            tGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCa                                                                         >  2:134072/1‑100 (MQ=255)
                              tgccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACg                                                                       >  1:341194‑M1/70‑100 (MQ=255)
                               tCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGt                                                                      <  1:1312754/100‑1 (MQ=255)
                               gccggatgcggcgttaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTTATGCGATATGTTTATCAGGCCACGt                                                                      >  2:899639‑M1/69‑100 (MQ=255)
                               gccggatgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACGt                                                                      >  1:431238‑M1/69‑100 (MQ=255)
                                cATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTc                                                                     >  2:1175912/1‑100 (MQ=255)
                                  tGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCtt                                                                   >  2:468417/1‑100 (MQ=255)
                                  tGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCtt                                                                   >  2:1222539/1‑100 (MQ=255)
                                    cTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaa                                                                 >  1:2048464/1‑100 (MQ=255)
                                    cTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaa                                                                 >  1:1385957/1‑100 (MQ=255)
                                     tgcggcgtgaattccttatccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaat                                                                >  1:1941472‑M1/63‑100 (MQ=255)
                                     tGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaat                                                                >  1:1192233/1‑100 (MQ=255)
                                     tGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaat                                                                <  1:1175920/100‑1 (MQ=255)
                                          ttCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgtaat                                                           <  2:1553178/100‑1 (MQ=255)
                                          ttCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgtaat                                                           >  2:962024/1‑100 (MQ=255)
                                          ttCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgtaat                                                           >  1:1081552/1‑100 (MQ=255)
                                           tCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTtaatgtaatg                                                          <  1:335087/100‑1 (MQ=255)
                                               gtcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCTACGTCTTAATGTAATGCttt                                                      >  2:754998/1‑100 (MQ=255)
                                                tcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTg                                                     <  1:292667/100‑1 (MQ=255)
                                                tcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTg                                                     <  2:2020871/100‑1 (MQ=255)
                                                tcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTg                                                     <  2:2287179/100‑1 (MQ=255)
                                                tcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTg                                                     <  1:943604/100‑1 (MQ=255)
                                                 cggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTgg                                                    >  2:2296840/1‑100 (MQ=255)
                                                   gtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTCTCAGGCCACGTCTTAATTTAATGCTTTggct                                                  <  1:1725120/100‑3 (MQ=255)
                                                   gtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGAt                                                  <  1:1010620/100‑1 (MQ=255)
                                                   gggCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGAt                                                  <  1:748277/98‑1 (MQ=255)
                                                    tGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGAtt                                                 <  2:1025535/100‑1 (MQ=255)
                                                     gCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGAttt                                                >  2:2416010/1‑100 (MQ=255)
                                                      atccggtctacaaaatttgcaaatccaaagcattacattaagacgTGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTg                                               >  1:912780‑M1/46‑100 (MQ=255)
                                                        gtgagtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCa                                             <  2:45657/100‑1 (MQ=255)
                                                        gtgagtgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCa                                             >  1:313305/1‑100 (MQ=255)
                                                              gaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAAtttt                                       >  2:1332150/1‑100 (MQ=255)
                                                               aTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTg                                      >  2:1228887/1‑100 (MQ=255)
                                                                tgtgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTATTAATGTAATGCTTTGAATTTGCAAATTTTGt                                     >  2:1090067/1‑100 (MQ=255)
                                                                  tgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAg                                   <  1:1871514/100‑1 (MQ=255)
                                                                  tgAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAg                                   >  2:101522/1‑100 (MQ=255)
                                                                   gAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGa                                  >  1:97168/1‑100 (MQ=255)
                                                                   gAAAGCATGACGTGGACAATAGCTAACGAAAATGGACTGATGGGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGa                                  >  2:2429804/1‑100 (MQ=255)
                                                                     aaGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGAcc                                >  1:996000/1‑100 (MQ=255)
                                                                       gCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCgg                              >  2:118938/1‑100 (MQ=255)
                                                                        ccTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGa                             <  1:1712840/100‑1 (MQ=255)
                                                                         cTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCgg                              >  2:1182899/1‑98 (MQ=255)
                                                                          tGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATa                           >  1:246890/1‑100 (MQ=255)
                                                                           naCGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATaa                          >  1:1948247/2‑100 (MQ=255)
                                                                           gACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATaa                          >  1:583568/1‑100 (MQ=255)
                                                                             cGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAgg                        <  2:668951/100‑1 (MQ=255)
                                                                                 gACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAAtt                    >  1:15684/1‑100 (MQ=255)
                                                                                 gACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAAtt                    >  1:792219/1‑100 (MQ=255)
                                                                                  aCAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTc                   <  2:1793869/100‑1 (MQ=255)
                                                                                    aaTAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCa                  <  2:1215661/99‑1 (MQ=255)
                                                                                      tAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgc               <  1:2048780/100‑1 (MQ=255)
                                                                                       aGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgcc              <  1:2053512/100‑1 (MQ=255)
                                                                                       aGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgcc              <  2:1988316/100‑1 (MQ=255)
                                                                                        gCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccg             <  1:1704497/100‑1 (MQ=255)
                                                                                        gCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccg             >  1:2279078/1‑100 (MQ=255)
                                                                                        gCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccg             >  1:1566898/1‑100 (MQ=255)
                                                                                         cTAACGAAAATGGCCTGATGCGCTATGTTTATCCGGCCACGTCTTAATGTAATGCTGTGGATTTGCAAATTTTGTAGACGGGATAAGGAATTTAcgccg             >  2:68784/1‑99 (MQ=255)
                                                                                         cTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccgc            >  1:933779/1‑100 (MQ=255)
                                                                                         cTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccgc            >  2:741633/1‑100 (MQ=255)
                                                                                         cTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccgc            >  1:1292508/1‑100 (MQ=255)
                                                                                           aaCGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCAt          >  2:936038/1‑100 (MQ=255)
                                                                                                  aTGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCAt   >  2:1764403/1‑100 (MQ=255)
                                                                                                   TGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATc  >  1:437486‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ATAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATC  >  NC_000913/4344714‑4344912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.