New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 730973 =90 (0.990)21 (0.250) 6/166 NT 20.0% coding (1391/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 3620569 = NA (NA)coding (1378/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

Only 100 of 129 total aligned reads displayed.

TCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCA  >  NC_000913/730874‑731072
                                                                                                   |                                                                                                   
caattcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcc                                                                                                     <  1:944797‑M1/1‑1 (MQ=255)
caattcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcc                                                                                                     >  2:166554‑M1/100‑100 (MQ=255)
 cAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGTAGGGCATCg                                                                                                    <  1:848685/100‑1 (MQ=255)
  aGGGCACAGACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCAGCACCCCGCCGGATGGCAGGGCATCgg                                                                                                   >  2:2026062/1‑100 (MQ=255)
   ttcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGc                                                                                                  <  2:926864‑M1/4‑1 (MQ=255)
   gggCACAGACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGc                                                                                                  >  2:2052582/1‑100 (MQ=255)
    tcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGc                                                                                                  >  2:327824‑M1/96‑99 (MQ=255)
    tcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCg                                                                                                 >  1:1850096‑M1/96‑100 (MQ=255)
    tcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCg                                                                                                 >  1:2284247‑M1/96‑100 (MQ=255)
    tcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCg                                                                                                 <  1:1673406‑M1/5‑1 (MQ=255)
    ggCACAGACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCg                                                                                                 <  1:233825/100‑1 (MQ=255)
     gCACAGACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGt                                                                                                >  1:1030721/1‑100 (MQ=255)
     catcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCg                                                                                                 >  2:1230938‑M1/95‑99 (MQ=255)
        caGACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGtttt                                                                                             <  2:1934796/100‑1 (MQ=255)
        caGACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGtttt                                                                                             >  2:335119/1‑100 (MQ=255)
          gccGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTAc                                                                                           >  1:1752053/3‑100 (MQ=255)
          gACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTAc                                                                                           <  1:957277/100‑1 (MQ=255)
          gACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTAc                                                                                           >  1:122824/1‑100 (MQ=40)
          gACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTAc                                                                                           <  1:225607/100‑1 (MQ=40)
          gACGGATGCAGCAGGCAGGACACCCGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCAGTGGCGTTTTa                                                                                            <  2:851328/99‑1 (MQ=14)
            cGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACta                                                                                         <  1:1491573/100‑1 (MQ=255)
            cGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACta                                                                                         <  1:293165/100‑1 (MQ=255)
                 gCCGCAGGCAGGACAACAGACTACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAact                                                                                    <  1:287044/100‑2 (MQ=255)
                  ccGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAacca                                                                                   <  2:2121031/100‑1 (MQ=255)
                  ccGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAacca                                                                                   >  1:703245/1‑100 (MQ=255)
                   cGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAaccac                                                                                  >  2:591956/1‑100 (MQ=40)
                     ccgggaggACAACAGCAAAGACCCCAGATGTGGTGACGGGCCTCAGCACGCGCATCACCACGCCGAAACGCGGGGCAGCGGCGTTGTACtatacct                                                                                    <  2:1303221/91‑4 (MQ=2)
                       ggcaggACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACcaca                                                                              >  1:1760388/1‑100 (MQ=255)
                        gcaggACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACcaccac                                                                               >  2:1170491/1‑98 (MQ=40)
                           ggACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCa                                                                          >  2:2244322/1‑100 (MQ=255)
                             acaacaGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCGGGGCATCGGCGTTTTACTATAACCACCACAGCCAGt                                                                        <  1:1811162/100‑1 (MQ=255)
                                acaGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTaa                                                                     >  1:2326246/1‑100 (MQ=255)
                                acaGAATACAGTCCGGATGTAGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTaa                                                                     >  2:1569921/1‑100 (MQ=255)
                                  aGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACg                                                                   <  1:1035168/100‑1 (MQ=255)
                                      tACAGTCCGGATGTGGGGACGGGCCTTATCACGCGCATCACCACTCCGGATGGCAGGGCATCGGCGTTTTACTATATCCGCCACAGCCAGTTAACGTCAg                                                               <  2:411954/100‑1 (MQ=14)
                                       aCAGTCCGGATGTGGTGACGGGCCTCATCACGGTCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCTGTTGACGTCAg                                                               <  2:1345114/99‑1 (MQ=14)
                                        cAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGcc                                                             >  1:1173972/1‑100 (MQ=255)
                                          gTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCAc                                                           >  1:809546/1‑100 (MQ=40)
                                               gATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGc                                                      <  2:1211651/100‑1 (MQ=35)
                                               gATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGc                                                      <  2:1211648/100‑1 (MQ=38)
                                               gATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGc                                                      <  2:1960077/100‑1 (MQ=38)
                                               gATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGc                                                      <  2:1211607/100‑1 (MQ=38)
                                               gATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGc                                                      <  1:779660/100‑1 (MQ=38)
                                               gATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGc                                                      >  1:1801862/1‑100 (MQ=38)
                                                aTGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGcc                                                     <  1:989620/100‑1 (MQ=35)
                                                aTGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGcc                                                     <  1:971581/100‑1 (MQ=38)
                                                aTGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGcc                                                     <  1:1419140/100‑1 (MQ=38)
                                                 tgtgGTGACGGGCCTCATCACGCGCATCACGACACCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGGCACCg                                                         >  2:1683166/1‑95 (MQ=255)
                                                   tggtgACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTg                                                   >  1:1227207/1‑99 (MQ=38)
                                                    ggtgACGGACCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATACCCACCACAGCCAGTTAACGTCAGCCACCGGGCCTg                                                   >  2:1305515/1‑98 (MQ=255)
                                                       gACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACACCCAGTTAACGTCAGCCACCGGGCCTGACggg                                              >  2:473860/1‑100 (MQ=18)
                                                        aCGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGc                                             <  2:1954355/100‑1 (MQ=38)
                                                           ggCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTgg                                          <  1:2384021/100‑1 (MQ=38)
                                                           ggCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTgg                                          >  1:2212650/1‑100 (MQ=38)
                                                           ggCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTgg                                          <  1:1160686/100‑1 (MQ=38)
                                                            gCCTCATCACGCGCATCACCACGCCGGATGTCAGGGCATCTGCGTTTTACGATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTg                                           <  2:1796936/98‑1 (MQ=255)
                                                            gCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGc                                             >  2:1128708/1‑96 (MQ=35)
                                                            gCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGa                                         <  2:2527771/100‑1 (MQ=38)
                                                            gCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGa                                         <  2:2528717/100‑1 (MQ=38)
                                                             ccTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGaa                                        >  1:2023808/1‑100 (MQ=38)
                                                             ccTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACACCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGaa                                        <  1:473864/100‑1 (MQ=18)
                                                              cTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGaaa                                       >  1:1742011/1‑100 (MQ=40)
                                                                catcaCGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATa                                     >  2:2214025/1‑100 (MQ=255)
                                                                  tcaCGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACg                                   <  1:1046431/100‑1 (MQ=255)
                                                                  gtggttatagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGgctggaattgcg                                   <  1:553153‑M1/67‑6 (MQ=255)
                                                                   caCGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGc                                  >  1:1574864/1‑100 (MQ=255)
                                                                       cgcCTCACCACGCCGTATGGCAGGGCATCGGCGTTGTCCTGTGGCCCCCACGGCCGGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCgg                               <  2:2170095/99‑1 (MQ=14)
                                                                          agtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAat                           <  1:190351‑M1/75‑1 (MQ=255)
                                                                          aTCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAat                           >  1:318002/1‑100 (MQ=255)
                                                                           tCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAata                          <  1:1978043/100‑1 (MQ=255)
                                                                           gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAata                          <  1:2293542‑M1/76‑1 (MQ=255)
                                                                           gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAata                          <  1:1853092‑M1/76‑1 (MQ=255)
                                                                           gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAata                          <  1:1062477‑M1/76‑1 (MQ=255)
                                                                           gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAata                          <  1:656810‑M1/76‑1 (MQ=255)
                                                                           gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAata                          <  2:1809378‑M1/76‑1 (MQ=255)
                                                                            tcaaacgccgatggcctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAatat                         <  1:1742170‑M1/77‑1 (MQ=255)
                                                                            taaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAatat                         <  1:2008189‑M1/77‑1 (MQ=255)
                                                                            caccacGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAatat                         >  2:15179/1‑100 (MQ=255)
                                                                             aaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATatg                        <  1:2190549‑M1/78‑1 (MQ=255)
                                                                             aaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATatg                        <  2:2546333‑M1/78‑1 (MQ=255)
                                                                             aaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGAGCCTGAAGGACTGGAATTGCGCCggg                              <  2:2376108‑M1/72‑1 (MQ=255)
                                                                              ccacGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTCACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATatga                       >  1:2236687/1‑100 (MQ=255)
                                                                              ccacGCCGGATGGCAGGGAATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCAAAGAGCCTAACGGGCTGGAAATACGCCGGGAATatga                       >  2:1930650/1‑100 (MQ=14)
                                                                              aaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATatga                       <  1:1487184‑M1/79‑1 (MQ=255)
                                                                               aacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATatgat                      <  1:2409927‑M1/80‑1 (MQ=255)
                                                                                acgccgatgccctgccatcCGGCGTTTTACAATGACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGTGAATatgatg                     <  2:1689247‑M1/81‑1 (MQ=255)
                                                                                acGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATatgatg                     >  1:1532990/1‑100 (MQ=255)
                                                                                acGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATatgatg                     <  1:15180/100‑1 (MQ=255)
                                                                                acGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATatgat                      <  2:635631/99‑1 (MQ=255)
                                                                                 cGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATAtgatga                    >  1:1142882/1‑100 (MQ=40)
                                                                                   ccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAAt                  <  2:2518659‑M1/84‑1 (MQ=255)
                                                                                     ggATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATgg                >  1:2535495/1‑100 (MQ=255)
                                                                                      gATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATggg               >  2:1115921/1‑100 (MQ=255)
                                                                                        ctgCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATGTGATGAATGGGGc             <  1:34380/98‑1 (MQ=255)
                                                                                          gCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATGTGATGAATGGGGcag           >  2:34379/1‑98 (MQ=255)
                                                                                          gCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGACTGGGGCCg           >  1:1491085/1‑100 (MQ=255)
                                                                                             gggCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTc         >  1:140191/1‑99 (MQ=255)
                                                                                                  tCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTc   <  1:1776914/100‑1 (MQ=255)
                                                                                                   CGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCa  <  1:849876‑M1/100‑1 (MQ=255)
                                                                                                   CGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCa  >  1:238859‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCA  >  NC_000913/730874‑731072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.