New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4326250NA (NA)5 (0.060) 3/164 NT NA noncoding (449/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 = 4326380 NA (NA)noncoding (579/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 194 total aligned reads displayed.

CTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTC  >  NC_000913/4326281‑4326479
                                                                                                   |                                                                                                   
cTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGC                                                                                                     >  1:2420617‑M2/1‑100 (MQ=255)
cTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGC                                                                                                     >  1:1856672‑M2/1‑100 (MQ=255)
 tACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCt                                                                                                    >  2:1571691/1‑100 (MQ=255)
 tACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCt                                                                                                    <  1:1746283/100‑1 (MQ=255)
 tACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGC                                                                                                     <  2:2112635‑M2/99‑1 (MQ=255)
  aCGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCtt                                                                                                   <  1:1276441/100‑1 (MQ=255)
  aCGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCt                                                                                                    <  2:1128552/99‑1 (MQ=255)
    ggAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAc                                                                                                 >  2:558359/1‑100 (MQ=255)
       gggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGa                                                                                              >  1:2139084/1‑100 (MQ=255)
         gTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATc                                                                                            >  1:1217660/1‑100 (MQ=255)
          tGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATca                                                                                           <  2:2534989/100‑1 (MQ=255)
          tGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACCGa                                                                                              >  2:2516908/1‑97 (MQ=255)
           gCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcac                                                                                          <  1:831370/100‑1 (MQ=255)
           gCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcac                                                                                          <  2:2123020/100‑1 (MQ=255)
             gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaa                                                                                        >  2:1752054/1‑100 (MQ=255)
             gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaa                                                                                        >  2:1220896/1‑100 (MQ=255)
              ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTGGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaat                                                                                       >  2:1693940/1‑100 (MQ=255)
              ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaat                                                                                       <  1:457585/100‑1 (MQ=255)
                 ctccgTAGGCCGGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaataca                                                                                    >  1:343183/5‑100 (MQ=255)
                    tGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATc                                                                                 <  2:630499/100‑1 (MQ=255)
                    tGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATc                                                                                 >  1:533718/1‑100 (MQ=255)
                    tGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATc                                                                                 >  2:180540/1‑100 (MQ=255)
                        ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAgat                                                                             >  1:1319735/1‑98 (MQ=255)
                        ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGtt                                                                             >  1:1002115/1‑100 (MQ=255)
                           cTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCt                                                                           >  2:1095413/1‑99 (MQ=255)
                           cTGATAAGACGCGCAACTGCCGCATCAGGCATCTGGCACCGTTGCCGGATGCAGGGTGAGCGCCTTATCCGGCTTACTGGTCACAGAACAAGCAgctgt                                                                           >  2:2245355/1‑95 (MQ=17)
                             gATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCtttt                                                                        >  2:379398/1‑100 (MQ=255)
                              atgagtcgcgCAAGGGTCGCATTAGGCATCTGGCAGCGTTGCCGGATCGGGCGCGAGCGCCTTATCCGGCTTACCGTTCACCATACAATCa                                                                                <  2:438432/85‑1 (MQ=25)
                              aTAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCttttt                                                                       <  2:1602992/100‑1 (MQ=255)
                               tAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTc                                                                      <  2:879854/100‑1 (MQ=255)
                               tAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTc                                                                      <  2:2503298/100‑1 (MQ=255)
                               tAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACAGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTc                                                                      <  2:301516/100‑1 (MQ=255)
                                aaGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTca                                                                     <  1:599388/100‑1 (MQ=255)
                                 cgatctgcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcac                                                                    <  1:122818/94‑1 (MQ=255)
                                 aGACGCGCAAGCGTCGCATCAGGCATCTGGCAACGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcac                                                                    >  2:1856041/1‑100 (MQ=255)
                                 aGACGCGCAAGCGTCGCATCAGGCATATGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTca                                                                     <  1:757771/99‑1 (MQ=255)
                                  gACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcaca                                                                   >  1:547880/1‑100 (MQ=255)
                                    cgcgCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACaaa                                                                 >  1:91173/1‑100 (MQ=255)
                                    cgagcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACaaa                                                                 >  1:2249114/4‑100 (MQ=255)
                                     gcgcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAAc                                                                <  2:317085/100‑1 (MQ=255)
                                      cgcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACt                                                               >  2:2552004/1‑100 (MQ=255)
                                       gcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcacagatcg                                                              >  2:122816/1‑95 (MQ=255)
                                        cAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCa                                                             <  1:324953/100‑1 (MQ=255)
                                        cAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCa                                                             >  1:1135268/1‑100 (MQ=255)
                                        cAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCa                                                             <  2:1994663/100‑1 (MQ=255)
                                        cAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCa                                                             <  1:616654/100‑1 (MQ=255)
                                          cgatctgCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGa                                                           <  2:1041056/94‑1 (MQ=255)
                                           gCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGAt                                                          >  1:1015847/1‑100 (MQ=255)
                                              tCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTc                                                       >  1:1764188/1‑100 (MQ=255)
                                               cGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCa                                                      >  1:210986/1‑100 (MQ=255)
                                                ncATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAg                                                     >  1:96149/2‑100 (MQ=255)
                                                 cATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctac                                                    <  2:356162‑M2/100‑50 (MQ=255)
                                                    cAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTc                                                 >  1:785250/1‑100 (MQ=255)
                                                      ggCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCAt                                               >  1:812464/1‑100 (MQ=255)
                                                        naTCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCg                                             >  1:2168332/2‑100 (MQ=255)
                                                         aTCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCgg                                            <  2:22490/100‑1 (MQ=255)
                                                          tCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGa                                           <  1:2188067/100‑1 (MQ=255)
                                                           cTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAc                                          <  2:2298001/100‑1 (MQ=255)
                                                            tGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAcc                                         >  2:838280/1‑100 (MQ=255)
                                                             ggCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCa                                        >  1:2372123/1‑100 (MQ=255)
                                                              gCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcacc                                       <  1:15345‑M2/100‑63 (MQ=255)
                                                               cACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCctacggtgccgactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcacc                                      <  1:1032566‑M2/100‑64 (MQ=255)
                                                                 ccGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCaacggtgccgactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctc                                    <  1:357504‑M2/100‑66 (MQ=255)
                                                                  cGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctcc                                   <  1:1184803‑M2/100‑67 (MQ=255)
                                                                  cGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAAcc                                   <  2:1775481/100‑1 (MQ=255)
                                                                   gTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCg                                  <  2:1319726/100‑1 (MQ=255)
                                                                    ttGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgt                                 <  1:641544‑M2/100‑69 (MQ=255)
                                                                     tGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTc                                <  2:1332884/100‑1 (MQ=255)
                                                                      gCCGGATGCGGCGTAAACGCCTTATCCGGCaacggtgccgactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtag                               <  1:144982‑M2/100‑71 (MQ=255)
                                                                      gCCGGATGCGGCGTAAACGCCTTATCCGGCaacggtgccgactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtag                               <  1:1650697‑M2/100‑71 (MQ=255)
                                                                      gCCGGATGCGGCGTAAACGCCTTATCCGGCaacagtgccaactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtag                               >  1:2120900‑M2/1‑30 (MQ=255)
                                                                      gCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtag                               <  2:1502044‑M2/100‑71 (MQ=255)
                                                                      gCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtag                               <  2:712832‑M2/100‑71 (MQ=255)
                                                                             gcggcgCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGc                        <  1:320497/100‑1 (MQ=255)
                                                                             gcggcgCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGc                        <  1:416696/100‑1 (MQ=255)
                                                                              cggcgtaaacgcCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTg                         <  2:1846448/89‑1 (MQ=255)
                                                                               ggcgCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCa                       <  2:2227231/99‑1 (MQ=255)
                                                                                     aGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATg                <  1:169098/100‑1 (MQ=255)
                                                                                         ccTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAACCTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTAt            <  1:1516147/100‑1 (MQ=255)
                                                                                         ccTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTAt            >  2:2197794/1‑100 (MQ=255)
                                                                                            tATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGt         <  1:1996000/100‑1 (MQ=255)
                                                                                             aTCCGGCaacggtgccagctgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgc        >  2:846651‑M2/1‑7 (MQ=255)
                                                                                             aTCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacg            <  2:591135‑M2/96‑90 (MQ=255)
                                                                                             aTCCGGCaacggtgccagatgcctgatgcgacgcttgcgcggcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgc        <  2:1399894‑M2/100‑94 (MQ=255)
                                                                                             aTCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTc        >  1:1069223/1‑100 (MQ=255)
                                                                                              tCCGGCaacggtgccgactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgca       <  2:25087‑M2/100‑95 (MQ=255)
                                                                                              tCCGGCaacggtgcccgctgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgc        >  2:2420603‑M2/1‑6 (MQ=255)
                                                                                              tCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgca       >  2:457581‑M2/1‑6 (MQ=255)
                                                                                               ccGGCcacggtgccgactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgcc          >  2:652243‑M2/1‑5 (MQ=255)
                                                                                               ccGGCaacggtgccgactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgca       <  2:127368‑M2/99‑95 (MQ=255)
                                                                                               ccGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGc      >  2:1075990/1‑100 (MQ=255)
                                                                                                cGGCaacggtgccgactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatc     <  2:1012702‑M2/100‑97 (MQ=255)
                                                                                                cGGCaacggtgccagctgcctgatgcgacgcttgcgcgtcttatcaggcctacaatttctcgcaccatccgtaggccggataaggcgtttacgc           >  2:2315884‑M2/1‑4 (MQ=255)
                                                                                                 ggCaccgttgccggatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatcc    <  1:2097689‑M2/100‑98 (MQ=255)
                                                                                                 ggCaccgttgccgactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatcc    <  1:2294762‑M2/100‑98 (MQ=255)
                                                                                                 ggCaacggtgccgactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatcc    <  1:1306327‑M2/100‑98 (MQ=255)
                                                                                                 ggCaacggtgccgactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatcc    >  1:1822398‑M2/1‑3 (MQ=255)
                                                                                                 ggCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatcc    <  2:2441040‑M2/100‑98 (MQ=255)
                                                                                                  gCaacggtgccgactgcctgatgcgactcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccg   >  1:2327561‑M2/1‑2 (MQ=255)
                                                                                                   cTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTc  <  1:2527988/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTC  >  NC_000913/4326281‑4326479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.