New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3620614	NA (NA)	14 (0.160)	7/166	NT	100%	coding (1423/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	= 3620635	0 (0.000)					coding (1444/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACA  >  NC_000913/3620536‑3620734                                                                                                     |                                                                                                    gtgACGGGCCTCATCACGCGCATAACCACGCCGTATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGG‑GCCTGACG                                                                                                     <  2:1543873‑M2/100‑1 (MQ=255) gtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACG                                                                                                     >  1:1391834‑M2/1‑100 (MQ=255)       ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaact                                                                                               >  1:1296747‑M2/1‑94 (MQ=255)       ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaact                                                                                               >  1:438553‑M2/1‑94 (MQ=255)        gCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAGCCACCACAACCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaact                                                                                               >  2:1842888‑M2/1‑93 (MQ=255)        gCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaactg                                                                                              >  1:2162270‑M2/1‑93 (MQ=255)         ccTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaactgg                                                                                             >  2:2336354‑M2/1‑92 (MQ=255)          cTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaactggt                                                                                            >  1:1157154‑M2/1‑91 (MQ=255)                 cgcgCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaactggttgtggt                                                                                      >  2:2194924‑M2/1‑84 (MQ=255)                             cGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaactggttgtggtggttatagtaaaa                                                                         >  1:873870‑M2/1‑72 (MQ=255)                                                            taACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatg                                          >  1:2063882‑M2/1‑41 (MQ=255)                                                                    acaGCCAGTTAACGTCAGCCACCGG‑GCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgat                                  <  1:952526‑M2/100‑68 (MQ=255)                                                                        ccAGTTAACGTCAGCCACCGG‑GCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgagg                              <  1:43582‑M2/100‑72 (MQ=255)                                                                          aGTTAACGTCAGCCACCGG‑GCCTGACGttaactggctgtgtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgaggccc                            <  2:242031‑M2/100‑74 (MQ=255)                                                                          aGTTAACGTCAGCCACCGG‑GCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgaggcc                            <  1:302165‑M2/100‑74 (MQ=255)                                                                              aaCGTCAGCCACCGG‑GCCTGACGttaactggctgtggtggttatagtaaaacgccgatgccctgccatccggcgtggtgatgcgcgtgatgaggcccgtc                        <  1:1639883‑M2/100‑78 (MQ=255)                                                                                                cTGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgt        <  2:1421501‑M2/99‑94 (MQ=255)                                                                                                 tGACGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtac      <  2:1942067‑M2/100‑96 (MQ=255)                                                                                                    cGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtactct   <  2:572391‑M2/100‑99 (MQ=255)                                                                                                    cGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtactct   >  1:1503100‑M2/1‑2 (MQ=255)                                                                                                    cGttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaacacatccgggctgtactct   <  1:1249573‑M2/100‑99 (MQ=255)                                                                                                     gttaactggttgtggtggttatagtaaaacgccgatgccctgccatccggcgtggttatgcgcgtgatgaggcccgtcaccacatccgggctgtactctg  >  1:890293‑M2/1‑1 (MQ=255)                                                                                                     |                                                                                                    GTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACA  >  NC_000913/3620536‑3620734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.