BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
MC JC	NC_000913	1,978,503	Δ776 bp	100%		insB1–insA	insB1, insA

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1978503–1979270	1979278	9–776	107 [0]	[3] 107	insB1–insA	insB1, insA

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1978502	0 (0.000)	91 (1.100)	64/162	NT	100%	intergenic (‑305/+16)	flhD/insB1	flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B
*	?	NC_000913	1979279 =	0 (0.000)	91 (1.100)	64/162	NT	100%	intergenic (‑64/‑474)	insA/uspC	IS1 repressor TnpA/universal stress protein

Only 100 of 107 total aligned reads displayed.

GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGT  >  NC_000913/1979181‑1979378

ntactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgta                                                                                                    >  2:1207213‑M2/99‑100 (MQ=255)

gtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgta                                                                                                    <  1:438921‑M2/2‑1 (MQ=255)

  actcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgtata                                                                                                  >  2:2007730‑M2/97‑100 (MQ=255)

  actcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgtata                                                                                                  <  1:1705196‑M2/4‑1 (MQ=255)

   ctcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATaa                                                                                                 >  1:1503946‑M2/96‑100 (MQ=255)

   ctcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATaa                                                                                                 >  1:796113‑M2/96‑100 (MQ=255)

    tcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAg                                                                                                >  1:2495446‑M2/95‑100 (MQ=255)

    tcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAg                                                                                                <  1:1495062‑M2/6‑1 (MQ=255)

     cgtcactacacgcacatacaacggaggggggctgcgcttttaaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGt                                                                                               >  2:1263884‑M2/94‑100 (MQ=255)

     cgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGt                                                                                               >  1:1233700‑M2/94‑100 (MQ=255)

       tcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCa                                                                                             <  2:135038‑M2/9‑1 (MQ=255)

         actacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATa                                                                                           >  1:6058‑M2/90‑100 (MQ=255)

         actacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATa                                                                                           >  2:181626‑M2/90‑100 (MQ=255)

          ctacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATAc                                                                                          <  2:394261‑M2/12‑1 (MQ=255)

          ctacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATAc                                                                                          <  2:826971‑M2/12‑1 (MQ=255)

             cacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttt                                                                                       >  2:1583878‑M2/86‑100 (MQ=255)

               cgcacataccacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttg                                                                                     >  2:81644‑M2/84‑100 (MQ=255)

               cgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACtttt                                                                                      >  1:1781722‑M2/84‑99 (MQ=255)

                  acatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgttt                                                                                  <  2:2558793‑M2/20‑1 (MQ=255)

                   catacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgtttt                                                                                 <  2:2127342‑M2/21‑1 (MQ=255)

                   catacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgtttt                                                                                 >  1:1747286‑M2/80‑100 (MQ=255)

                   catacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgttt                                                                                  >  2:1069006‑M2/80‑99 (MQ=255)

                   catacaacggagggaggctgcgattttcaataatgcgtgatgcagattacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgttt                                                                                  <  2:2558639‑M2/20‑1 (MQ=255)

                    atacaacggaggggggctgcgattttgaataatgcgtgatgcagatcacacaaaacactcaattacttaatataaatgTATAAGTCATACttttgttttg                                                                                <  1:139042‑M2/22‑1 (MQ=255)

                    atacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgttttg                                                                                <  2:1846174‑M2/22‑1 (MQ=255)

                    atacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgttttg                                                                                >  1:879828‑M2/79‑100 (MQ=255)

                    atacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgtgttg                                                                                >  1:1554217‑M2/79‑100 (MQ=255)

                      acaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTggg                                                                              <  1:661587‑M2/24‑1 (MQ=255)

                      acaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTggg                                                                              <  1:961875‑M2/24‑1 (MQ=255)

                      acaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTggg                                                                              <  1:1030794‑M2/24‑1 (MQ=255)

                      acaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattactgaacataaatgTATAAGTCATACTTTTGTTTTggg                                                                              <  2:354786‑M2/24‑1 (MQ=255)

                           ggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTAt                                                                         <  2:1744802‑M2/29‑1 (MQ=255)

                            gaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTAtt                                                                        <  1:1326379‑M2/30‑1 (MQ=255)

                            gaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTAGTGGGTGTAtt                                                                        >  2:1679533‑M2/71‑100 (MQ=255)

                              ggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTAttt                                                                       <  2:658693‑M2/31‑1 (MQ=255)

                              ggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTc                                                                      <  1:1960251‑M2/32‑1 (MQ=255)

                              ggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTc                                                                      <  2:900388‑M2/32‑1 (MQ=255)

                                ggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCaa                                                                    <  2:2151774‑M2/34‑1 (MQ=255)

                                 gggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAAt                                                                   >  2:776375‑M2/66‑100 (MQ=255)

                                  ggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATc                                                                  <  1:2289024‑M2/36‑1 (MQ=255)

                                  ggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATc                                                                  <  1:2218928‑M2/36‑1 (MQ=255)

                                   gctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCt                                                                 <  1:2168459‑M2/37‑1 (MQ=255)

                                    ctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTg                                                                <  1:1387183‑M2/38‑1 (MQ=255)

                                      gcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGtt                                                              <  2:789457‑M2/40‑1 (MQ=255)

                                      gcaattttcaataatgcgtgatgcagatcacacaaaacactttattacttaacataaatgTATAAGTCATACTTTTGTTTTGTGTGTATTTCAATCTGtt                                                              <  2:2323952‑M2/40‑1 (MQ=255)

                                          ttttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTaaaa                                                          >  2:2460352‑M2/57‑100 (MQ=255)

                                          ttttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTaaaa                                                          <  2:1223054‑M2/44‑1 (MQ=255)

                                           tttcaataatgcgtgatgtagatcacacaaaacactcaattacttaacataaaagTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTaaaaa                                                         <  1:2282229‑M2/45‑1 (MQ=255)

                                           tttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTaaaaa                                                         >  1:1392841‑M2/56‑100 (MQ=255)

                                           tttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTaaaaa                                                         >  1:1786663‑M2/56‑100 (MQ=255)

                                            ttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAg                                                        <  2:128247‑M2/46‑1 (MQ=255)

                                            ttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAg                                                        <  2:953458‑M2/46‑1 (MQ=255)

                                            ttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAg                                                        >  1:1420979‑M2/55‑100 (MQ=255)

                                             tcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGTGTGTATTTCAATATGTTAAAAAGt                                                       >  2:2051319‑M2/54‑100 (MQ=255)

                                             tcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGt                                                       <  2:658420‑M2/47‑1 (MQ=255)

                                              caataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGtt                                                      >  1:639238‑M2/53‑100 (MQ=255)

                                               aataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGttt                                                     >  1:53826‑M2/52‑100 (MQ=255)

                                                ataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGtttt                                                    >  2:525097‑M2/51‑100 (MQ=255)

                                                       gtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctac                                             <  1:1583889‑M2/57‑1 (MQ=255)

                                                       gtgacgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctac                                             >  1:892936‑M2/44‑100 (MQ=255)

                                                         gatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgc                                           >  1:939991‑M2/42‑100 (MQ=255)

                                                          atgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgct                                          <  2:909157‑M2/60‑1 (MQ=255)

                                                          atgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgct                                          <  2:1581144‑M2/60‑1 (MQ=255)

                                                          atgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgct                                          <  1:1782524‑M2/60‑1 (MQ=255)

                                                           tgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgcta                                         <  2:2026929‑M2/61‑1 (MQ=255)

                                                            gcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTag                                        <  2:312748‑M2/62‑1 (MQ=255)

                                                            gcagatcacacaaaacactcaattactgaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTag                                        <  2:2495431‑M2/62‑1 (MQ=255)

                                                             cagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgcta                                         >  2:1019890‑M2/38‑98 (MQ=255)

                                                             cagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagc                                       <  1:1704934‑M2/63‑1 (MQ=255)

                                                              agatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagca                                      >  1:1420522‑M2/37‑100 (MQ=255)

                                                              agatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagca                                      >  2:2480614‑M2/37‑100 (MQ=255)

                                                               gatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaa                                     >  1:2122662‑M2/36‑100 (MQ=255)

                                                               gatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaa                                     >  2:332051‑M2/36‑100 (MQ=255)

                                                                atcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaag                                    <  2:909776‑M2/66‑1 (MQ=255)

                                                                  cacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaagca                                  >  1:1255155‑M2/33‑100 (MQ=255)

                                                                  cacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaagca                                  <  1:1081687‑M2/68‑1 (MQ=255)

                                                                   acacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAgcaagcaa                                 >  1:841247‑M2/32‑100 (MQ=255)

                                                                    cacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCaaa                                >  1:1218380‑M2/31‑100 (MQ=255)

                                                                     acaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCaaaa                               >  1:1092505‑M2/30‑100 (MQ=255)

                                                                        aaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATg                            <  2:158312‑M2/74‑1 (MQ=255)

                                                                            actcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGaaa                         <  2:463404‑M2/77‑1 (MQ=255)

                                                                              tcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAg                      <  1:1541894‑M2/80‑1 (MQ=255)

                                                                               caattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAgg                     <  1:1018214‑M2/81‑1 (MQ=255)

                                                                               caattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAg                      <  1:1745582‑M2/80‑1 (MQ=255)

                                                                               caattacttaacataaatgTATAAGTCATACTTCTGTTTTGGGTGTATTTCAATCAGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAgg                     >  2:100760‑M2/20‑100 (MQ=255)

                                                                                aattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGa                    >  1:1436838‑M2/19‑100 (MQ=255)

                                                                                   tacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaata                 >  2:2516802‑M2/16‑100 (MQ=255)

                                                                                   tacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaata                 <  1:1633909‑M2/85‑1 (MQ=255)

                                                                                    tcttaacATAAATGTATAATTCAGACTTTGGTTTTGGGTGTATTTTTATCTGTTAAAAAGGTTTTCGTTACGCTAGCAATCAAAAATGAAACAgg                     <  2:184685/89‑1 (MQ=255)

                                                                                    acttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaataa                >  2:2391045‑M2/15‑100 (MQ=255)

                                                                                    acttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaataa                >  1:695119‑M2/15‑100 (MQ=255)

                                                                                     cttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaataat               <  1:862698‑M2/87‑1 (MQ=255)

                                                                                       taacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCg             >  2:761890‑M2/12‑100 (MQ=255)

                                                                                       taacATAAACGTATCAGCCATACGTAGGGGTTGAGCGTCTTTCAATCTGTTAAAATGTTTTTGGCTAAGCGAGACAGCAACAATGACACAGGgatatgcg             >  2:2082367/4‑96 (MQ=255)

                                                                                          cataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGaaa          >  2:763902‑M2/9‑100 (MQ=255)

                                                                                               atgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGa     <  2:2383421‑M2/97‑1 (MQ=255)

                                                                                                tgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGAt    >  1:646809‑M2/3‑100 (MQ=255)

                                                                                                tgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGAt    >  1:906233‑M2/3‑100 (MQ=255)

                                                                                                tGTATAAGTCATACTTTTGTTTTAGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTAAAAAAAAAAAAAAAAATGAAACAGGAATAATCGAAATGGGa     <  2:241455/99‑1 (MQ=255)

                                                                                                  tataAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGt  <  1:68143/100‑1 (MQ=255)

GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGT  >  NC_000913/1979181‑1979378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`