BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	2,758,577	G→T	100%	N8K (AAC→AAA)	yfjH ←	CP4‑57 prophage; uncharacterized protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,758,577	0	G	T	100.0%	329.0 / NA	98	N8K (AAC→AAA)	yfjH	CP4‑57 prophage; uncharacterized protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (46/52); total (46/52)

Only 100 of 102 total aligned reads displayed.

TTCTACAAATTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGGTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAATCGATCGGCCGTTAGAATACTA  >  NC_000913/2758480‑2758673

ttCTACAAATTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGttt                                                                                                <  1:233165/100‑1 (MQ=255)

  cTACAAATTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTtttt                                                                                              >  1:847061/1‑100 (MQ=255)

   tACAAATTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCCTAAATCAATGTATTAGAAGTTGTAAAAATTGTATTTTTGGTACATGGtttttt                                                                                             >  2:1106816/1‑100 (MQ=255)

   tACAAATTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGtttttt                                                                                             >  1:1902741/1‑100 (MQ=255)

   tACAAATTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGtttttt                                                                                             <  1:1853173/100‑1 (MQ=255)

    aCAAATTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTtttttt                                                                                            >  2:1923763/1‑100 (MQ=255)

    aCAAATTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTtttttt                                                                                            <  1:321741/100‑1 (MQ=255)

      aaaTTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGc                                                                                          <  1:374897/100‑1 (MQ=255)

      aaaTTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGc                                                                                          >  1:856408/1‑100 (MQ=255)

       aaTTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGcc                                                                                         <  2:1856601/100‑1 (MQ=255)

       aaTTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGcc                                                                                         <  2:1353531/100‑1 (MQ=255)

       aaTTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGcc                                                                                         <  2:2245961/100‑1 (MQ=255)

        aTTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCt                                                                                        <  2:1508406/100‑1 (MQ=255)

            gtacATAAAAATCATTCAGAGAAATTATAAAACCACCATAAATCAATGTATTAGATGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTaaa                                                                                    <  2:277936/97‑1 (MQ=255)

             ttCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAg                                                                                   <  1:1627559/100‑1 (MQ=255)

              tCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGa                                                                                  >  1:302624/1‑100 (MQ=255)

               cATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTTCCTTAAAGAt                                                                                 >  2:845074/1‑100 (MQ=255)

               cATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGAt                                                                                 >  1:487888/1‑100 (MQ=255)

               cATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGAt                                                                                 >  1:1443317/1‑100 (MQ=255)

               cATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGAt                                                                                 <  1:2203355/100‑1 (MQ=255)

               cATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTAGTACATGGTTTTTTTGCCTTaaa                                                                                    >  2:520291/1‑97 (MQ=255)

                aTAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATa                                                                                >  1:148730/1‑100 (MQ=255)

                 tAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATAc                                                                               >  1:1389198/1‑100 (MQ=255)

                 tAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATAc                                                                               >  2:527610/1‑100 (MQ=255)

                 tAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATAc                                                                               >  1:1474770/1‑100 (MQ=255)

                 tAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTATTGGTACATGGTTTTTTTGCCTTAAAGATAc                                                                               >  1:302653/1‑100 (MQ=255)

                  aaaaaTCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATAcc                                                                              <  1:134046/100‑1 (MQ=255)

                    aaaTCATTCAGAGAAATCATAAAACCTCCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCa                                                                            <  1:1494748/100‑1 (MQ=255)

                    aaaTCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCa                                                                            >  1:660305/1‑100 (MQ=255)

                     aaTCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTTCCTTAATTATACCCAt                                                                           >  2:2034766/1‑100 (MQ=255)

                     aaTCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCAt                                                                           <  2:7146/100‑1 (MQ=255)

                      aTCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCAtt                                                                          <  2:1546427/100‑1 (MQ=255)

                            cAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAAtctc                                                                    >  1:335226/1‑100 (MQ=255)

                            cAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAAtct                                                                     >  1:12678/1‑99 (MQ=255)

                              gagaAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAAtctctc                                                                  <  2:1808616/100‑1 (MQ=255)

                               agaAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATctctct                                                                 <  1:1107315/100‑1 (MQ=255)

                               agaAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATctctct                                                                 >  1:1715603/1‑100 (MQ=255)

                                gaAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTg                                                                <  1:418198/100‑1 (MQ=255)

                                  actCATAAAACCAACATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCa                                                              >  1:1739794/3‑100 (MQ=255)

                                  aaTCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCa                                                              >  1:1904610/1‑100 (MQ=255)

                                  aaTCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCa                                                              <  2:424306/100‑1 (MQ=255)

                                    tCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAAc                                                            <  1:1878509/100‑1 (MQ=255)

                                     cATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAAcc                                                           >  1:2232963/1‑100 (MQ=255)

                                     cATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTACCTTAAAGATACCCATTAATCTCTCTGCAAc                                                            >  1:1729414/1‑99 (MQ=255)

                                      aTAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAAcc                                                           <  2:251407/99‑1 (MQ=255)

                                         aaaCCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAg                                                       <  1:527617/100‑1 (MQ=255)

                                            ccaccaTAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGa                                                    >  1:535166/1‑100 (MQ=255)

                                            ccaccaTAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGa                                                    >  2:640263/1‑100 (MQ=255)

                                             caccaTAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGaa                                                   <  1:801592/100‑1 (MQ=255)

                                               ncaTAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAAcc                                                 >  1:1952762/2‑100 (MQ=255)

                                               ccaTAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAAcc                                                 >  1:89703/1‑100 (MQ=255)

                                               ccaTAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAAcc                                                 <  2:881286/100‑1 (MQ=255)

                                                caTAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAAc                                                  <  2:2235603/98‑1 (MQ=255)

                                                caTAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCa                                                >  2:476353/1‑100 (MQ=255)

                                                caTAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCa                                                <  1:2096174/100‑1 (MQ=255)

                                                  tAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAAcc                                                 <  1:2303070/97‑1 (MQ=255)

                                                   aaaTCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATg                                             >  2:544978/1‑100 (MQ=255)

                                                    aaTCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATga                                            <  1:544985/100‑1 (MQ=255)

                                                    aaTCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACAAAAGTGAACCAATga                                            >  1:238305/1‑100 (MQ=255)

                                                      tCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATgaga                                          <  1:2270948/100‑1 (MQ=255)

                                                       cAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGagag                                         <  1:1836586/100‑1 (MQ=255)

                                                       cAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGagag                                         <  2:2217156/100‑1 (MQ=255)

                                                         aagTATTAAAGGTTGTAAAAATTGGATTTTTGGTACCTTGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGc                                       <  1:1634805/98‑1 (MQ=255)

                                                         aTGTATTATAGGTTGTAAAAACTTTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTAAACCAATGagag                                         <  2:32342/98‑1 (MQ=255)

                                                         aTGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGATTTTTTTGCCGTAAAGATACACATTAATCTCTCTGCAACCAAAGTGAACCAATg                                             <  2:841278/94‑1 (MQ=255)

                                                           gTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGcaa                                     >  1:1358488/1‑100 (MQ=255)

                                                            tATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGcaac                                    >  1:1154911/1‑100 (MQ=255)

                                                            tATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGcaac                                    >  1:797521/1‑100 (MQ=255)

                                                            tATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGcaac                                    <  2:1748564/100‑1 (MQ=255)

                                                             aTTAGAGGTTGTAAAAATTGTATTTTTGGTACATTGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGcaaca                                   <  2:2185707/100‑1 (MQ=255)

                                                               tAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAg                                 >  1:1359237/1‑100 (MQ=255)

                                                               tAGAGGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAg                                 <  2:367432/100‑1 (MQ=255)

                                                                agagGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGTCTTAAAGATACTCATTAATCTCTCTTCAACCAAAGTGAACCAATTAGAGGAaagaag                                 >  2:2045624/1‑99 (MQ=255)

                                                                agagGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGa                                <  1:1365589/100‑1 (MQ=255)

                                                                 gagGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGaa                               >  2:1720483/1‑100 (MQ=255)

                                                                 gagGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGaa                               <  1:1720495/100‑1 (MQ=255)

                                                                 gagGTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGa                                >  2:1017094/1‑99 (MQ=255)

                                                                   ggTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCTACCAATGTGAACCAATGAGAGGCAACAAGAATg                             <  1:2339157/100‑1 (MQ=255)

                                                                   ggTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATg                             >  1:14290/1‑100 (MQ=255)

                                                                    gTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGa                            <  2:1894549/100‑1 (MQ=255)

                                                                    gTTGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAAGGa                            <  2:2098535/100‑1 (MQ=255)

                                                                      tGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAAc                          <  2:2214670/100‑1 (MQ=255)

                                                                      tGTAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAAc                          <  1:1443343/100‑1 (MQ=255)

                                                                        tAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACaa                        <  2:2560596/100‑1 (MQ=255)

                                                                        tAAAAATTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATATCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACaa                        >  2:1067914/1‑100 (MQ=255)

                                                                         aaaaaTTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGTGGCAACAAGAATGAACAat                       >  1:2447318/1‑100 (MQ=255)

                                                                         aaaaaTTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAat                       <  2:2062731/100‑1 (MQ=255)

                                                                             aTTGTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAatcgat                   <  2:1034097/100‑1 (MQ=255)

                                                                              ttGTATTTTTGGTACATGGTTTTTTTTTTTTTTTTTTACCCATTAATCTCTCTGCAATCAAAGTTTATCAATGAGAGTCAACAAGAATGAACAatcgatc                  >  2:1953304/1‑100 (MQ=255)

                                                                                gTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAATCGATCgg                <  1:247016/100‑1 (MQ=255)

                                                                                gTATTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAATCGATCgg                <  2:1201883/100‑1 (MQ=255)

                                                                                 tATTTTTGGTACATGGTTTTTTTTCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAATCGATCgg                <  2:1202728/99‑1 (MQ=255)

                                                                                  aTTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAATCGATCGGcc              <  2:537921/100‑1 (MQ=255)

                                                                                  aTTTTTGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAATCGATCGGcc              <  2:692998/100‑1 (MQ=255)

                                                                                    ttttGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAATCGATCGGCCGt            <  2:1164015/100‑1 (MQ=255)

                                                                                       tGGTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAATCGATCGGCCGTTAg         <  2:1601598/100‑1 (MQ=255)

                                                                                        ggTACATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAATCGATCGGCCGTTAGa        >  1:1229244/1‑100 (MQ=255)

                                                                                        ggTACATGGTTTTTTTGCCTTAAAGATACCCATAAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAATCGATCGGCCGTTAGa        >  2:1682556/1‑100 (MQ=255)

                                                                                            cATGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAATCGATCGGCCGTTAGAAtac    >  1:2452608/1‑100 (MQ=255)

                                                                                              tGGTTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAATCGATCGGCCGTTAGAAtacta  >  2:1035836/1‑100 (MQ=255)

TTCTACAAATTTGTTCATAAAAATCATTCAGAGAAATCATAAAACCACCATAAATCAATGTATTAGAGGTTGTAAAAATTGTATTTTTGGTACATGGGTTTTTTGCCTTAAAGATACCCATTAATCTCTCTGCAACCAAAGTGAACCAATGAGAGGCAACAAGAATGAACAATCGATCGGCCGTTAGAATACTA  >  NC_000913/2758480‑2758673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`