| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,772,236 | A→T | 16.1% | pseudogene (831/900 nt) | yfjV ← | pseudogene, CP4‑57 prophage;Phage or Prophage Related; putative pump protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,772,236 | 0 | A | T | 16.1% | 282.9 / 43.1 | 113 | pseudogene (831/900 nt) | yfjV | pseudogene, CP4‑57 prophage;Phage or Prophage Related; putative pump protein |
| Reads supporting (aligned to +/- strand): ref base A (46/48); new base T (8/10); total (55/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.94e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
GATGGTAATGTTGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTGCCAATCGGGGTGAT > NC_000913/2772137‑2772334 | gATGGTAATGTTGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACa > 2:2113561/1‑100 (MQ=255) tGGTAATGTTGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAAt > 2:2125187/1‑100 (MQ=255) aTGTTGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCgg < 2:822912/100‑1 (MQ=255) aTGTTGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCgg < 1:1267976/100‑1 (MQ=255) gTTGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTa > 2:2104398/1‑100 (MQ=255) ttGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGCGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTAc < 2:1460742/100‑1 (MQ=255) ttGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCATTGTCATGACTGTGCCGGtgc < 2:1476285/100‑3 (MQ=25) ctGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCATTGTCATGACTGTGCCGGtgc < 2:2049118/99‑3 (MQ=25) tGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCATTGTCATGACTGTGCCGGtgct < 2:489831/100‑4 (MQ=25) tGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCATTGTCATGACTGTGCCGGtgct < 1:1171512/100‑4 (MQ=25) tGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACg > 2:632938/1‑100 (MQ=255) gCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCATTGTCATGACTGTGCCGGtgctg < 1:1389681/100‑5 (MQ=25) gCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCATTGTCATGACTGTGCCGGtgctg < 1:657193/100‑5 (MQ=25) gCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCATTGTCATGACTGTGCCGGtgcag > 1:2049132/1‑96 (MQ=25) gCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAAAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACgg > 2:1850398/1‑100 (MQ=255) cATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCATTGTCATGACTGTGCCGGtgctgttt < 1:694019/100‑8 (MQ=25) cATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAg > 2:1908026/1‑100 (MQ=255) cATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAg < 1:1089472/100‑1 (MQ=255) cATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAg > 1:1441867/1‑100 (MQ=255) atatCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCATTGTCATGACTGTGCCGGtgctgtttg < 1:319670/100‑9 (MQ=25) tatCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTa > 2:2199703/1‑100 (MQ=255) atCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTaa < 1:1410087/100‑1 (MQ=255) atCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTaa > 2:1887470/1‑100 (MQ=255) cAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAata < 1:1101772/100‑1 (MQ=255) cAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAata > 1:2317038/1‑100 (MQ=255) cAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGACCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAata < 2:337756/100‑1 (MQ=255) aGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAata < 2:49616/99‑1 (MQ=255) aTCTACTTACAAAGTGACATACAGCCGCCCCGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATccc > 2:39006/1‑100 (MQ=37) tCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATcccc < 1:745447/100‑1 (MQ=255) cTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCATCGGCACAGTCATGACAATGCCGGCACTGAAGTAATATCCCCa < 2:1729460/100‑1 (MQ=255) cTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCa < 1:1485030/100‑1 (MQ=255) tAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCACCaa > 2:1170426/1‑100 (MQ=255) aTTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGt > 2:562188/1‑100 (MQ=255) aTTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGt < 2:2040674/100‑1 (MQ=255) ttACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTg < 1:1780791/100‑1 (MQ=255) tACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGa > 2:2111228/1‑100 (MQ=255) tACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGa > 1:365781/1‑100 (MQ=255) tACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGa < 1:1304110/100‑1 (MQ=255) tACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGa > 1:1208405/1‑100 (MQ=255) aCAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGAt < 1:149796/100‑1 (MQ=255) aCAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGAt > 1:1871251/1‑100 (MQ=255) cAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGAtt > 2:519675/1‑100 (MQ=255) gTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCa > 2:320192/1‑100 (MQ=255) aCAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCatat > 1:307396/1‑100 (MQ=255) agagagCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATAttt > 1:1627577/1‑100 (MQ=255) gagagCCGCCACGCGAGCGGGGCCAGAGTACTAAATAGCACCGTCACAGTAATGATAATGCCGGTACGGAAGTAATATCCCCGAGTGATTGTCATAtttt < 2:1521556/100‑1 (MQ=25) gagagCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATAtttt > 1:407079/1‑100 (MQ=255) gagCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATTACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTc < 2:845935/100‑1 (MQ=255) gagCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATAttttta > 2:1046151/1‑99 (MQ=255) gagCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTc > 2:242348/1‑100 (MQ=255) gagCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTc < 1:1506338/100‑1 (MQ=255) agCCGCCACGCCAGCGCGGCCAGATTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTc < 2:884671/99‑1 (MQ=255) agCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCt < 2:86931/100‑1 (MQ=255) gccgccACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTg < 1:1743251/100‑1 (MQ=255) ccgccACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTgg < 1:1511768/100‑1 (MQ=255) gccacgccaGCGCGGCCAGAGTGACAAACAGCAGCGGCACAGTCATGACAATGCCGGTACGGAAGAAATATCCCCAAGTGATTGTCATATTTTTCTggg < 2:1113092/99‑1 (MQ=255) gccacgccaGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGc < 1:679659/100‑1 (MQ=255) ccacgccaGCGCGGCCAGAGTGACAAACAGCACCGTCACAGTCATTACAATGCCGGTACGTAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGc < 2:2326336/99‑1 (MQ=255) ccacgccaGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCa > 1:1887062/1‑100 (MQ=255) cacgccaGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTggtc > 2:301075/1‑96 (MQ=255) cacgccaGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCaa > 1:632537/1‑100 (MQ=255) cgccaGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGc < 1:767430/100‑1 (MQ=255) cgccaGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGc < 1:1785095/100‑1 (MQ=255) gccaGCGCGGCCAGAGTGACAAATAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGca > 1:1021103/1‑100 (MQ=255) gccaGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGca < 2:2317024/100‑1 (MQ=255) gcgcGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATg < 2:307392/100‑1 (MQ=255) gcgGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCa < 2:257380/100‑1 (MQ=255) gCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGcc > 1:2348395/1‑100 (MQ=255) gCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGcc < 2:2149908/100‑1 (MQ=255) ccAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCca > 1:127181/1‑100 (MQ=255) gACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCAcagcag < 2:729188/99‑1 (MQ=255) gACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCaga > 1:729195/1‑100 (MQ=255) gACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCaga > 1:451230/1‑100 (MQ=255) aCAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCagag < 2:434398/100‑1 (MQ=255) ttccgtaCCGGCATTGTCATGACGGGGCCGGTACGGAAGTCATATCTACAAGTGATTGTCATATTTTTCTGGGCAAGCCCCAGCAGCCACCACAGAGTTg > 2:2331291/7‑100 (MQ=16) cAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGcc < 1:202865/100‑1 (MQ=255) cgtaCCGGCATTGTCATGACTGTGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCa > 1:191525/4‑100 (MQ=38) cgtaCCGGCATTGTCATGACTGTGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTGTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCa > 1:1800888/4‑100 (MQ=37) gtaCCGGCATTGTCATGACTGTGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAg > 2:274545/3‑100 (MQ=38) gtaCCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAg > 1:1608214/3‑100 (MQ=255) aCCGGCATTGTCATGCCTGTGCCGGTCCGGAAGAAATAACCCCAAATGATCGTCATATTTTTCTGTGCACGCCCATGCAGCCACAGCAGAGTTGcc > 2:2167373/1‑96 (MQ=255) aCCGGCATTGTCATGACTGTGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGAc > 2:2203749/1‑100 (MQ=38) aCCGGCATTGTCATGACTGTGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGAc > 1:2114409/1‑100 (MQ=38) ccggcattgTCATGACTGTGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACt > 1:2057550/9‑100 (MQ=38) ccGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACt < 2:2465525/100‑1 (MQ=255) cGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTg < 1:2135036/100‑1 (MQ=255) cGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTg < 2:787437/100‑1 (MQ=255) cGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTg < 1:2135075/100‑1 (MQ=255) ggCACAGTCATGACAATGCCTGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTTGGCAAGCACATGCAGCCACAGCAGGGTTGCCAGACTGc < 2:1582430/100‑1 (MQ=255) ggCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACttc < 1:1730325/100‑3 (MQ=255) ggCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTGc < 1:2151223/100‑1 (MQ=255) gCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTGcc < 1:1957238/100‑1 (MQ=255) cacaGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTGCCa < 2:1761620/100‑1 (MQ=255) cacaGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTGCCa > 1:394352/1‑100 (MQ=255) tCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTGCCAATCgg > 1:253314/1‑100 (MQ=255) cATGACTGTGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTGCCAATCggg < 2:191523/100‑1 (MQ=255) cATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTGCCAATCgg > 2:1844359/1‑99 (MQ=255) aTGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTGCCAATCgggg > 2:384197/1‑100 (MQ=255) cAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTGCCAATCGGGGTGAt > 1:687169/1‑100 (MQ=255) cAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTGCCAATCGGGGTGAt > 1:689269/1‑100 (MQ=255) | GATGGTAATGTTGCTCATATCAGTATCTAATTACAAAGTGACAGAGAGCCGCCACGCCAGCGCGGCCAGAGTGACAAACAGCACCGGCACAGTCATGACAATGCCGGTACGGAAGTAATATCCCCAAGTGATTGTCATATTTTTCTGGGCAAGCACATGCAGCCACAGCAGAGTTGCCAGACTGCCAATCGGGGTGAT > NC_000913/2772137‑2772334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |