| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,708,429 | T→C | 16.5% | intergenic (‑724/+187) | dppA ← / ← proK | dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor/tRNA‑Pro |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,708,429 | 0 | T | C | 16.5% | 208.9 / 30.0 | 96 | intergenic (‑724/+187) | dppA/proK | dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor/tRNA‑Pro |
| Reads supporting (aligned to +/- strand): ref base T (37/43); new base C (10/6); total (47/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTC > NC_000913/3708331‑3708528 | gACGCTGACGCGTCTTATCAGGCCTACGTCGCGTCGAACCTCCCTGCCCCCGGAGGTTCTCCTCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTg < 1:2559689/100‑1 (MQ=255)gACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTg < 1:462982/100‑1 (MQ=255)gACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTg > 1:2070174/1‑100 (MQ=255) aCGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAAAAACAAAAAAGCCTGCTCGTTGa < 2:74487/100‑1 (MQ=255) cGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAg > 1:81275/1‑100 (MQ=255) cGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAg > 1:868465/1‑100 (MQ=255) cGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAg < 1:1190089/100‑1 (MQ=255) gCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGc < 1:1569377/100‑1 (MQ=255) cTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCa > 2:160523/1‑100 (MQ=255) gtcagcgTCGCATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCCTGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAg < 2:1364274/96‑1 (MQ=14) cgcgTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCt < 2:996942/100‑1 (MQ=255) cgcgTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCAACGAGCAGGCt < 1:1080719/100‑1 (MQ=17) cgccTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCttt < 2:1361779/97‑1 (MQ=255) gTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCtttt > 2:62015/1‑100 (MQ=255) tattATCAGGCCTACGTCGAGTCGAACTTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCAACGAGCAGGCt < 2:1056902/94‑1 (MQ=14) tCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTc < 1:121582/100‑1 (MQ=255) cTTATCAGGCCTACGTCGAGTTGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCg < 1:1934901/100‑1 (MQ=255) ttATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGa < 1:1681026/100‑1 (MQ=255) tATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGaa > 1:640373/1‑100 (MQ=255) tATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCAACGAGCAGGCttttttgc < 1:2341285/100‑5 (MQ=14) tATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCAACGAGCAGGCttttttg < 2:893524/99‑4 (MQ=14) aTCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAAt > 2:2019917/1‑100 (MQ=255) aTCAGGCCTACGTCGACTCGAACCTCCCTGCCCCCAGAGGTTCTCATCCTCATGAGCGGCAGAAGCAAAAAAGCCTGCTCAACGAGCAGGCttttttgct < 2:1172537/100‑6 (MQ=14) tCAGGCCTACGTCGATTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAAtt < 2:1762932/100‑1 (MQ=255) aGGCGTATGTCGAGTCGAACCTCCCTGCCCATGTAGGTTCTCATCCTCATGAGCTGTAGAAGAAAAATAGCATTCTCGTTGCGCAGGCTTTTCGAAtt < 2:1901493/98‑1 (MQ=11) aGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTg > 1:1063932/1‑100 (MQ=255) aGGCCTACGTCGAGTCGAACCTCCCTGCACCCGAAGTTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCAACGAGCAGGCttttttgcttct < 2:914396/100‑9 (MQ=14) ggCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTgg < 2:19444/100‑1 (MQ=255) gCCTAGGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTgg < 2:2304911/99‑1 (MQ=18) ccttccGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCAACCTCATCAGCTGCATATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCCAATTTg < 2:511260/93‑1 (MQ=11) ccTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTc > 2:1950737/1‑100 (MQ=25) ccTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTc < 1:936358/100‑1 (MQ=25) cTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCg < 1:2385339/100‑1 (MQ=25) cTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCg > 1:1125235/1‑100 (MQ=25) cGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTg < 2:1383585/100‑1 (MQ=14) gtcgagtcgaACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGa < 2:2538713/100‑1 (MQ=11) gtcgagtcgaACCTCACTCCCCCCGGAGGTTCTCATCCCCATGCGCTGCAGAAGCACAAACGTCTTCTCGTTGAGCACGCTTTTCGAATTTGGTctg > 2:2423296/1‑95 (MQ=11) ncccTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTc > 1:2538571/2‑100 (MQ=18) cccgCCCCCGGAGGTTCTCATCCTCATGAGCTACAAATGCAAAAAAGCCTGCTCGCTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGc > 1:155171/4‑100 (MQ=11) cTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGcc < 1:1060463/100‑1 (MQ=255) cTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGcc < 1:1842037/100‑1 (MQ=255) gCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCAc < 1:1396575/100‑1 (MQ=255) ccGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCg > 1:598482/1‑100 (MQ=255) cGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGt < 2:307262/100‑1 (MQ=255) cGGAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGt < 1:589404/100‑1 (MQ=255) gAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTgg < 1:1333546/100‑1 (MQ=255) gAGGTTCTCATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTgg < 1:2091413/100‑1 (MQ=255) tctcATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGc < 1:1839935/100‑1 (MQ=255) tcATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAGTCGCTACTTCGTGTCTCGc > 2:89809/1‑98 (MQ=14) tcATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGccc < 2:1763265/100‑1 (MQ=255) tcATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGccc < 1:362392/100‑1 (MQ=255) tcATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGcc < 1:362923/99‑1 (MQ=255) cATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCt > 2:374930/1‑100 (MQ=255) cATCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCt > 2:248385/1‑100 (MQ=255) tCCTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGc > 2:2358467/1‑100 (MQ=255) cTCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCgg > 1:131136/1‑100 (MQ=255) tCATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCggg > 1:1531560/1‑100 (MQ=255) cATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCggtc < 1:2375652/100‑3 (MQ=255) cATGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGc > 2:1910578/1‑100 (MQ=255) aTGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGcc < 1:825820/100‑1 (MQ=255) aTGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGcc < 1:1310525/100‑1 (MQ=255) tGAGCTGGAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCg < 2:1753346/100‑1 (MQ=255) tGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTg > 2:282142/1‑93 (MQ=255) tGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCg < 1:1661348/100‑1 (MQ=255) tGAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCg < 1:1616381/100‑1 (MQ=255) gAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGt < 1:2358482/100‑1 (MQ=255) gAGCTGCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGt < 1:1142846/100‑1 (MQ=255) gCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTg > 1:101557/1‑100 (MQ=255) gCAGAAGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTg > 1:1568069/1‑100 (MQ=255) gaagCAAGAAACCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCGCTGCGGGCCGTTGCTg > 2:1340291/4‑97 (MQ=21) gaagCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGgcg < 2:1979025/97‑1 (MQ=255) aattcgaaaaGCCTGCTCAACGAGCAGGCTTGTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCTTTGCTGgc > 1:1271710/7‑98 (MQ=25) aagCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGAGAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGGGGGCGGTTGcggtcg > 2:1209198/3‑94 (MQ=21) ttcgaaaaGCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCaa > 1:342584/5‑100 (MQ=25) tcgaaaaGCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGGGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAAc > 2:1707345/4‑100 (MQ=37) cAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCTACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGgc > 2:1960491/1‑95 (MQ=255) cAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCCAc > 1:2513643/1‑100 (MQ=255) cgaaaaGCCTGCTCAACGAGCAGGCTTTTTGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGTCGCAACg > 2:41853/3‑100 (MQ=25) cgaaaaGCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACg > 1:2544699/3‑100 (MQ=37) cgaaaaGCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTAGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACg > 1:2087993/3‑100 (MQ=25) cgaaaaGCCTGCTCAACGAGAAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACg > 2:2432097/3‑100 (MQ=37) aaaaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACg > 1:1531819/1‑100 (MQ=255) aaaaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTGGCTGGCGCAACg > 1:607300/1‑100 (MQ=255) gaaaaGCCTGCTCAACGAGCAGGCTTTTCGACTTTGGTCGGTGATAGCGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGc > 2:1957546/2‑89 (MQ=25) gaaaaGCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGt > 2:1992617/2‑100 (MQ=37) aaaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGt > 1:96953/1‑100 (MQ=255) aaaGCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTtc > 2:910456/1‑100 (MQ=37) gCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGGGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTtctct < 1:155234/100‑1 (MQ=255) gCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTtctct > 1:670230/1‑100 (MQ=255) ccTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAGTCGCTACTACGTGGGTGGCCCTGCGGGCGGTGGCTGGCGCACGGTtatctc > 2:2467069/1‑100 (MQ=18) tGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCtcgc > 1:1910245/1‑100 (MQ=255) tGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCtcgc < 1:374934/100‑1 (MQ=255) tGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCtcgc > 2:858673/1‑100 (MQ=255) tGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCtcgc > 1:1957771/1‑100 (MQ=255) gCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCtcgct > 1:1435221/1‑100 (MQ=255) cGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCtcgcttcg < 2:963199/100‑1 (MQ=255) ttGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCtcgcttcgct < 1:1218770/100‑1 (MQ=255) tGAGCAGGCGTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTc < 1:884127/100‑1 (MQ=255) | GACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTC > NC_000913/3708331‑3708528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |