Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 712,150 A→T 100% L218Q (CTG→CAG)  ybfF ← acyl‑CoA esterase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913712,1500AT97.9% 320.8 / ‑1.8 96L218Q (CTG→CAG) ybfFacyl‑CoA esterase
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base T (38/56);  total (39/57)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.41e-01

GACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCAGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTCCCAACCT  >  NC_000913/712055‑712245
                                                                                               |                                                                                               
gACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTaa                                                                                             >  1:7008/1‑100 (MQ=255)
   ggATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAatc                                                                                          >  2:2425876/1‑100 (MQ=255)
   ggATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAatc                                                                                          <  1:581444/100‑1 (MQ=255)
   ggATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAatc                                                                                          <  1:576940/100‑1 (MQ=255)
   ggATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAatc                                                                                          >  2:559420/1‑100 (MQ=255)
     aTAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAatcat                                                                                        >  1:282325/1‑100 (MQ=255)
       aGCGCGTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAAtcatca                                                                                      <  1:244179/100‑1 (MQ=255)
        gcgcGTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCGGTGGAAATTGAGCCTGTAAATCATCAc                                                                                     >  2:1032882/1‑100 (MQ=255)
        gcgcGTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCCGTGGAAATTGAGCCTGTAAatcat                                                                                        >  2:1273327/1‑97 (MQ=255)
         cgcgTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACg                                                                                    <  1:240539/100‑1 (MQ=255)
          gcgTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACgg                                                                                   <  1:942308/100‑1 (MQ=255)
            gTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTa                                                                                 >  2:1608840/1‑100 (MQ=255)
             tAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGATCCTGTAAATCATCACGGTAc                                                                                <  2:1560844/100‑1 (MQ=255)
             tAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTAc                                                                                <  1:233496/100‑1 (MQ=255)
                tACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGc                                                                             >  2:1868317/1‑100 (MQ=255)
                tACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGc                                                                             <  1:690702/100‑1 (MQ=255)
                 aCCGCATCCGGTTTTTCAGCATGTACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCt                                                                            <  1:1559813/100‑1 (MQ=255)
                 aCCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCt                                                                            >  1:356124/1‑100 (MQ=255)
                 aCCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCt                                                                            >  1:434943/1‑100 (MQ=255)
                  ccGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTc                                                                           <  2:374164/100‑1 (MQ=255)
                   cGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCg                                                                          <  2:998269/100‑1 (MQ=255)
                    gCATCCGGTTTTTCGGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGc                                                                         <  2:312818/100‑1 (MQ=255)
                    gCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGc                                                                         <  2:1193843/100‑1 (MQ=255)
                    gCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGc                                                                         >  2:2014291/1‑100 (MQ=255)
                      aTCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTa                                                                       >  1:1000334/1‑100 (MQ=255)
                       tCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTaa                                                                      <  1:1888267/100‑1 (MQ=255)
                         cGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACa                                                                    <  2:115384/100‑1 (MQ=255)
                          ggTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACAt                                                                   >  1:237369/1‑100 (MQ=255)
                           gTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACCTGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATa                                                                  <  1:599148/100‑1 (MQ=255)
                            tttttCAGCATGGACCCAGTTTCCCCCGCTTGCAATCACATGCGCTCTTTCCTGTGGAAATTGAGCCTGTAAATCATCACGCTACTACTCGCTACCATAc                                                                 <  2:410336/100‑1 (MQ=255)
                               ttCATCATGGACCCAGTGTCTCGCTCCTGCAATTACTTGCTCCCGTTTCTGTGGAAATTGAGCCTGTAAATCATCACGTTACTGCTCGCTAACATACgg                                                               <  2:2033502/99‑1 (MQ=255)
                               ttCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGga                                                              <  1:2042993/100‑1 (MQ=255)
                               ttCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGga                                                              >  2:1226169/1‑100 (MQ=255)
                                tCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGgag                                                             <  1:1873149/100‑1 (MQ=255)
                                     aTGGACGCAGTGAGCCGCGGCTGTAATTACATGCGCCTGTGCCTGTGGAAATTTTGCCTGTAAATCATCACGTTACTGCTCGCTAACATACGGAGAATTg                                                        <  2:386466/100‑1 (MQ=255)
                                        gACCCAGTGACCCGCGCCTGCAATCACATGCGCCCTTGCCTGTGAAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTgccg                                                     <  1:748888/100‑1 (MQ=255)
                                        gACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTATAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTgccg                                                     >  2:1635301/1‑100 (MQ=255)
                                            cAGTGCCCCGCCCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCCCGGTACTGCTCGCTAACATACGGACCATTgccgcc                                                   >  2:770527/1‑98 (MQ=255)
                                             aGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAgg                                                <  1:131835/100‑1 (MQ=255)
                                             aGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAgg                                                <  1:1903350/100‑1 (MQ=255)
                                             aGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAgg                                                <  2:216128/100‑1 (MQ=255)
                                              gTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAggg                                               <  1:828497/100‑1 (MQ=255)
                                              gTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAgg                                                <  2:216250/99‑1 (MQ=255)
                                                gACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGAt                                             >  1:234834/1‑100 (MQ=255)
                                                gACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGAt                                             <  2:1830138/100‑1 (MQ=255)
                                                 aCCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATa                                            <  1:931315/100‑1 (MQ=255)
                                                  cccGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATaa                                           >  1:2122263/1‑100 (MQ=255)
                                                  cccGAGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAggg                                               >  2:1409671/1‑96 (MQ=255)
                                                     gcgcCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAAca                                        <  2:1380137/100‑1 (MQ=255)
                                                     gcgcCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAAca                                        <  2:2111134/100‑1 (MQ=255)
                                                       gcCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAAcagg                                      <  2:934338/100‑1 (MQ=255)
                                                       gcCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAAcagg                                      <  1:522393/100‑1 (MQ=255)
                                                       gcCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAAcagg                                      >  1:1089180/1‑100 (MQ=255)
                                                       gcCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCAGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAAcagg                                      <  1:1340081/100‑1 (MQ=255)
                                                           gCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAAcagggcag                                  <  1:714153/100‑1 (MQ=255)
                                                             aaTCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAAcagggcaggg                                <  2:1692071/100‑1 (MQ=255)
                                                              aTCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGt                               >  1:163409/1‑100 (MQ=255)
                                                              aTCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGt                               >  1:1385609/1‑100 (MQ=255)
                                                              aTCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGt                               >  1:2220574/1‑100 (MQ=255)
                                                               tCACATGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTg                              <  2:1898704/100‑1 (MQ=255)
                                                                 acaTGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGAt                            >  1:1636219/1‑100 (MQ=255)
                                                                  caTGCGCCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGAt                            >  2:1084784/1‑99 (MQ=255)
                                                                     gcgcCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCa                        <  1:1273335/100‑1 (MQ=255)
                                                                       gcCCGTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATg                      <  1:2410893/100‑1 (MQ=255)
                                                                           gTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCgg                  <  1:1852093/100‑1 (MQ=255)
                                                                           gTGCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCgg                  <  1:1942776/100‑1 (MQ=255)
                                                                           gTGCCTGTGGAAATTGAGCCTGTAAATCAGCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCgg                  <  2:7008/100‑1 (MQ=255)
                                                                            tGCCTGTGGAAATTGTGCCAGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCggg                 >  1:684865/1‑100 (MQ=255)
                                                                             gCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGa                <  1:897477/100‑1 (MQ=255)
                                                                             gCCTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGa                <  2:1266275/100‑1 (MQ=255)
                                                                               cTGTGGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGAtt              <  1:1186163/100‑1 (MQ=255)
                                                                                tgtgGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGAttt             >  1:41041/1‑100 (MQ=255)
                                                                                tgtgGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGAttt             <  1:1504944/100‑1 (MQ=255)
                                                                                  tgGAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTtc           >  1:480221/1‑100 (MQ=255)
                                                                                   ggAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTtct          >  2:194488/1‑100 (MQ=255)
                                                                                   ggAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTtct          >  1:96522/1‑100 (MQ=255)
                                                                                   ggAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTtct          >  1:876601/1‑100 (MQ=255)
                                                                                   ggAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTtct          <  1:2183510/100‑1 (MQ=255)
                                                                                   ggAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCAGCCAGGGATAAACAGGGCAGGGTGATGCCATGCCGGGATTTtct          >  2:437902/1‑100 (MQ=255)
                                                                                    gAAATTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTtctc         <  2:1257563/100‑1 (MQ=255)
                                                                                     aaaTTGAGCCTGTAAATCATCACGGTACTGCTCGTTAACATACGGAGAATTGCCGCCAGGCATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTcc        <  2:275435/100‑1 (MQ=255)
                                                                                     aaaTTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTcc        <  2:587815/100‑1 (MQ=255)
                                                                                     aaaTTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTcc        >  2:871112/1‑100 (MQ=255)
                                                                                     aaaTTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTcc        <  1:1863605/100‑1 (MQ=255)
                                                                                     aaaTTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTcc        <  1:879743/100‑1 (MQ=255)
                                                                                      aaTTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTccc       <  1:786556/100‑1 (MQ=255)
                                                                                      aaTTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTccc       >  1:2379745/1‑100 (MQ=255)
                                                                                      aaTTGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTccc       >  1:107336/1‑100 (MQ=255)
                                                                                        ttGAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTCCCaa     <  1:392666/100‑1 (MQ=255)
                                                                                          gAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTCCCAAcc   <  2:1310756/100‑1 (MQ=255)
                                                                                          gAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTCCCAAcc   >  2:1113267/1‑100 (MQ=255)
                                                                                          gAGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTCCCAAcc   <  2:595314/100‑1 (MQ=255)
                                                                                           aGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATGAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTCCCAAcgt  <  1:1730863/100‑3 (MQ=255)
                                                                                           aGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTCCCAACCt  >  1:474737/1‑100 (MQ=255)
                                                                                           aGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTCCCAACCt  >  1:1613230/1‑100 (MQ=255)
                                                                                           aGCCTGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTCCCAACCt  >  1:1595999/1‑100 (MQ=255)
                                                                                               |                                                                                               
GACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGACCCAGTGACCCGCGCCTGCAATCACATGCGCCCGTGCCTGTGGAAATTGAGCCAGTAAATCATCACGGTACTGCTCGCTAACATACGGAGAATTGCCGCCAGGGATAAACAGGGCAGGGTGATCCCATGCCGGGATTTTCTCCCAACCT  >  NC_000913/712055‑712245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: