Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,242,942 Δ66 bp coding (510‑575/891 nt) malG ← maltose transporter subunit

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4242942 4243007 66 110 [1] [3] 110 malG maltose transporter subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 42429411 (0.010)101 (0.800) 71/184 0.8 99.5% coding (576/891 nt) malG maltose transporter subunit
?NC_000913 4243008 = 0 (0.000)coding (509/891 nt) malG maltose transporter subunit

Only 100 of 110 total aligned reads displayed.

AGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAGCAGCTTCTTCCAGCGAACTGTCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCC  >  NC_000913/4242842‑4243039
                                                                                                   |                                                                                                  
aGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCA                                                                                                    <  2:2022909‑M1/100‑1 (MQ=255)
aGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGACGGAAGGCCTGCCACGGAGTCGCACCATCCAGCGCA                                                                                                    >  1:1210941‑M1/1‑100 (MQ=255)
  cGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAat                                                                                                  <  1:395240‑M1/100‑3 (MQ=255)
    aTAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcc                                                                                                <  1:2159897‑M1/100‑5 (MQ=255)
       aaCGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccac                                                                                             >  1:1084000‑M1/1‑93 (MQ=255)
       aaCGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccac                                                                                             <  1:877144‑M1/100‑8 (MQ=255)
       aaCGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCACACCATCCAGCGCAatcccac                                                                                             >  2:2459895‑M1/1‑93 (MQ=255)
        aCGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacc                                                                                            >  1:2868215‑M1/1‑92 (MQ=255)
        aCGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacc                                                                                            >  2:1957630‑M1/1‑92 (MQ=255)
         cGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCTCCATCCAGCGCAatcccaccc                                                                                           >  1:1158763‑M1/1‑91 (MQ=255)
         cGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAGCAGcttct                                                                                           >  2:440852/1‑100 (MQ=255)
              ggATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagata                                                                                      >  2:2527106‑M1/1‑86 (MQ=255)
              ggATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagata                                                                                      >  2:1011851‑M1/1‑86 (MQ=255)
                 tGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgc                                                                                   >  1:1870588‑M1/1‑83 (MQ=255)
                 tGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacg                                                                                    >  1:1413449‑M1/1‑83 (MQ=255)
                 tGAATACCACCGCCAGAATCGGTACGGACAGCGGCAAAAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgc                                                                                   >  1:2869962‑M1/1‑83 (MQ=255)
                 tGAATAACACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacg                                                                                    <  1:1206149‑M1/99‑17 (MQ=255)
                  gAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcg                                                                                  <  1:2802478‑M1/100‑19 (MQ=255)
                  gAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcg                                                                                  <  2:3120184‑M1/100‑19 (MQ=255)
                  gAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgc                                                                                   <  1:1224529‑M1/99‑18 (MQ=255)
                   aaTACCACCGCCAGAATCGGTATTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcga                                                                                 <  1:101299‑M1/100‑20 (MQ=255)
                     tACCACCGCCAGAATTGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaa                                                                               >  2:2104468‑M1/1‑79 (MQ=255)
                      accaccGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaa                                                                              <  2:1413469‑M1/100‑23 (MQ=255)
                         accGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaatta                                                                           >  1:54014‑M1/1‑75 (MQ=255)
                          ccGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattac                                                                          >  2:1471835‑M1/1‑74 (MQ=255)
                          ccGCCAGAATCAGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattac                                                                          >  2:2443566‑M1/1‑74 (MQ=255)
                           cGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacg                                                                         <  2:1989524‑M1/100‑28 (MQ=255)
                           cGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacg                                                                         >  2:73166‑M1/1‑73 (MQ=255)
                            gCCAGACTCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccaccccgatacgcgaaacttacgc                                                                        >  1:398472‑M1/1‑72 (MQ=255)
                            gCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgc                                                                        <  2:54015‑M1/100‑29 (MQ=255)
                            gCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaatcacgc                                                                        >  2:733913‑M1/1‑72 (MQ=255)
                             ccAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgcc                                                                       >  1:2527945‑M1/1‑71 (MQ=255)
                              cAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccg                                                                      <  1:936690‑M1/100‑31 (MQ=255)
                              cAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccg                                                                      >  2:2175366‑M1/1‑70 (MQ=255)
                                gAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgcc                                                                    <  2:2649868‑M1/100‑33 (MQ=255)
                                   tCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtg                                                                 <  1:3313779‑M1/100‑36 (MQ=255)
                                     aatacTCACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgag                                                               <  2:788903‑M1/98‑38 (MQ=255)
                                        aCTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtat                                                            <  1:1141541‑M1/100‑41 (MQ=255)
                                         cTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtatt                                                           >  2:325457‑M1/1‑59 (MQ=255)
                                         cTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtatt                                                           >  2:325470‑M1/1‑59 (MQ=255)
                                         cTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtatt                                                           >  2:3365920‑M1/1‑59 (MQ=255)
                                           gACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattca                                                         >  2:2700946‑M1/1‑57 (MQ=255)
                                             cAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcagg                                                       <  2:1839561‑M1/100‑46 (MQ=255)
                                             cAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcagg                                                       <  2:870763‑M1/100‑46 (MQ=255)
                                               gCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggcc                                                     >  2:2726499‑M1/1‑53 (MQ=255)
                                               gCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggcc                                                     >  2:87282‑M1/1‑53 (MQ=255)
                                               gCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggcc                                                     >  1:968304‑M1/1‑53 (MQ=255)
                                               gCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggcc                                                     <  1:1369998‑M1/100‑48 (MQ=255)
                                                cGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggcca                                                    >  1:313222‑M1/1‑52 (MQ=255)
                                                  gCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccatt                                                  <  2:2348314‑M1/100‑51 (MQ=255)
                                                  gCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaat                                                  >  2:1450203‑M1/1‑50 (MQ=255)
                                                  gCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaat                                                  >  2:1766417‑M1/1‑50 (MQ=255)
                                                   cAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatg                                                 >  2:2226029‑M1/1‑49 (MQ=255)
                                                   cAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatg                                                 <  1:2619987‑M1/100‑52 (MQ=255)
                                                   cAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatg                                                 <  2:2148839‑M1/100‑52 (MQ=255)
                                                    aaCAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatga                                                >  2:2787060‑M1/1‑48 (MQ=255)
                                                       aGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatg                                             <  2:820076‑M1/100‑56 (MQ=255)
                                                        ggACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatgg                                            <  1:148641‑M1/100‑57 (MQ=255)
                                                         gACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatgga                                           <  1:1618316‑M1/100‑58 (MQ=255)
                                                          aCAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaa                                          <  2:1181790‑M1/100‑59 (MQ=255)
                                                           cAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaat                                         >  1:2616195‑M1/1‑41 (MQ=255)
                                                           cAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaat                                         >  2:2010871‑M1/1‑41 (MQ=255)
                                                           cAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaat                                         <  1:255880‑M1/100‑60 (MQ=255)
                                                           cAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaat                                         <  2:437993‑M1/100‑60 (MQ=255)
                                                            aaGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatg                                        <  1:1211435‑M1/100‑61 (MQ=255)
                                                            aaGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatg                                        <  1:3243187‑M1/100‑61 (MQ=255)
                                                             aGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgcgcgtattcaggccaatgaatggaatgt                                       >  1:784873‑M1/1‑39 (MQ=255)
                                                             aGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgcccccgtgcgtattcaggccaatgcatggaat                                         >  1:329800‑M1/1‑39 (MQ=255)
                                                               gCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtac                                     <  2:2672223‑M1/100‑64 (MQ=255)
                                                                cGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtact                                    <  2:2603409‑M1/100‑65 (MQ=255)
                                                                cGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtact                                    <  2:2606171‑M1/100‑65 (MQ=255)
                                                                cGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaaatccgccgccgtgagtattcaggccaatgaatggcatgtac                                     >  1:216978‑M1/1‑36 (MQ=255)
                                                                   aaGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcac                                 <  1:733971‑M1/100‑68 (MQ=255)
                                                                    aGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacc                                >  1:3395380‑M1/1‑32 (MQ=255)
                                                                     ggCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcaccc                               <  2:636840‑M1/100‑70 (MQ=255)
                                                                     ggCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcaccc                               <  1:1302217‑M1/100‑70 (MQ=255)
                                                                     ggCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcaccc                               <  1:1004636‑M1/100‑70 (MQ=255)
                                                                        cTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccaga                            >  1:3318762‑M1/1‑28 (MQ=255)
                                                                         tGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagac                           <  2:2693433‑M1/100‑74 (MQ=255)
                                                                         tGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagac                           >  1:934035‑M1/1‑27 (MQ=255)
                                                                         tGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagac                           <  2:2381756‑M1/100‑74 (MQ=255)
                                                                          gCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacg                          >  2:1470585‑M1/1‑26 (MQ=255)
                                                                               ggTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaa                     <  2:1175482‑M1/100‑80 (MQ=255)
                                                                               ggTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgactacacaggccaatgaatggaatgtactcacccagacgatcca                     >  1:2575686‑M1/1‑21 (MQ=255)
                                                                                    cGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaac                >  2:1507277‑M1/1‑16 (MQ=255)
                                                                                     gCACCATCCAGCGCAatcccacccagattcgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacg               >  1:2601245‑M1/1‑15 (MQ=255)
                                                                                     gCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacg               <  2:2870008‑M1/100‑86 (MQ=255)
                                                                                      cACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgc              >  2:3430882‑M1/1‑14 (MQ=255)
                                                                                      cACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgc              >  1:1501853‑M1/1‑14 (MQ=255)
                                                                                        ccATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcat            >  2:1245901‑M1/1‑12 (MQ=255)
                                                                                          agccagCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcatac          >  2:2356560‑M1/3‑10 (MQ=255)
                                                                                          aTCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcatac          >  1:3470163‑M1/1‑10 (MQ=255)
                                                                                          aTCCAGCGCAatcccacccagatacgcgaaaactacgccgccgtgagtattcaggccaatgattggaatgtactcacccagacgatcaaacaacgcatac          >  2:320093‑M1/1‑10 (MQ=255)
                                                                                           tCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcataca         <  2:1733046‑M1/100‑92 (MQ=255)
                                                                                           tCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcataca         >  2:2752177‑M1/1‑9 (MQ=255)
                                                                                              aGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcatacaacg      <  1:1725147‑M1/100‑95 (MQ=255)
                                                                                              aGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcatacaacg      <  1:87281‑M1/100‑95 (MQ=255)
                                                                                               gcgcAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcatacaacgc     <  1:2166797‑M1/100‑96 (MQ=255)
                                                                                                  cAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcatacaacgcgac  >  2:1856540‑M1/1‑2 (MQ=255)
                                                                                                  cAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcatacaacgcg    >  1:2453363‑M1/1‑2 (MQ=255)
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AGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAGCAGCTTCTTCCAGCGAACTGTCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCC  >  NC_000913/4242842‑4243039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: