Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,520,0800GT28.4% 300.3 / 141.7 177intergenic (+16/‑182)curA/mcbRcurcumin/dihydrocurcumin reductase, NADPH‑dependent/colanic acid and biofilm gene transcriptional regulator, MqsR‑controlled
Reads supporting (aligned to +/- strand):  ref base G (62/64);  new base T (23/27);  total (85/92)
Fisher's exact test for biased strand distribution p-value = 7.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.04e-01

Only 100 of 187 total aligned reads displayed.

GAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTGAGTGGTTT  >  NC_000913/1519981‑1520179
                                                                                                   |                                                                                                   
gagaATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGgcggcg                                                                                                     <  1:2061064/100‑1 (MQ=255)
gagaATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGgcggcg                                                                                                     >  1:1973574/1‑100 (MQ=255)
gagaATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGgcggcg                                                                                                     >  2:111364/1‑100 (MQ=255)
  gaATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTa                                                                                                   >  2:3232191/1‑100 (MQ=255)
    aTGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAg                                                                                                 <  2:3161332/100‑1 (MQ=255)
    aTGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATACGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAg                                                                                                 >  1:1388366/1‑100 (MQ=255)
      gcgcCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAgcc                                                                                               >  2:631325/1‑100 (MQ=255)
      gcgcCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAgcc                                                                                               <  2:1631645/100‑1 (MQ=255)
        gcCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAATGGCGGCGTAAgccgc                                                                                             >  1:2113846/1‑100 (MQ=255)
        gcCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAgccgc                                                                                             >  1:1098761/1‑100 (MQ=255)
         ccACAGACGTTTATCGGCCTGCTGAAGGGTAAATACTTCGGCAAAGTGGTGATCCGCGTGGCGCGTGATGATTAAAGTTTCAACGGCGGCGTAAgccgcc                                                                                            <  1:222088/100‑1 (MQ=255)
         ccACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAgccgcc                                                                                            <  1:604005/100‑1 (MQ=255)
           acaGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCTTACgccgccgt                                                                                          <  2:377652/100‑3 (MQ=255)
           acaGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCTTACgccgccgt                                                                                          <  1:447030/100‑3 (MQ=255)
            caGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCTTACgccgccgtt                                                                                         <  1:3451388/100‑4 (MQ=255)
            caGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCTTACgccgccgtt                                                                                         <  1:226495/100‑4 (MQ=255)
            caGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATa                                                                                         >  1:1514358/1‑100 (MQ=255)
             agtggTTTATCGGCCTGCTGAAGGGTAAAAACTGCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCTTACgccgccgttg                                                                                        <  1:1696430/96‑5 (MQ=255)
             aGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCTTACgccgccgttg                                                                                        <  2:1258482/100‑5 (MQ=255)
             aGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCTTACgccgccgttg                                                                                        <  1:1883402/100‑5 (MQ=255)
             aGACGTTGATCGGCCTGCTGAAGGGTAAAACCTTCGGCAAAGTGGTGATCTGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCTTACgccgccgtt                                                                                         <  1:1203727/99‑4 (MQ=255)
              gACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCTTACgccgccgttga                                                                                       <  2:51587/100‑6 (MQ=255)
              gACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCTTACgccgccgttga                                                                                       <  1:2515748/100‑6 (MQ=255)
              gACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCTTACgccgccgttga                                                                                       <  2:1342906/100‑6 (MQ=255)
              gACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATaaa                                                                                       <  1:937954/100‑1 (MQ=255)
               aCGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCTTACgccgccgttgaa                                                                                      <  1:3206407/100‑7 (MQ=255)
               aCGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCTTACgccgccgttg                                                                                        <  2:1222534/98‑5 (MQ=255)
                 gTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAAt                                                                                    >  2:252297/1‑100 (MQ=255)
                   ttATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATcc                                                                                  <  1:762528/100‑1 (MQ=255)
                   ttATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCCGGTGATGCTTAAAGTTCCAACGGCGGCGTACGCCGCCCTAAAAATc                                                                                   >  1:1475727/1‑99 (MQ=255)
                     aTCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAg                                                                                <  2:797407/100‑1 (MQ=255)
                     aTCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAg                                                                                <  2:2321225/100‑1 (MQ=255)
                     aTCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAg                                                                                >  1:1083770/1‑100 (MQ=255)
                       cGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGc                                                                              >  1:203381/1‑100 (MQ=255)
                        ggCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCa                                                                             >  2:173194/1‑100 (MQ=255)
                        ggCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCa                                                                             <  1:2428600/100‑1 (MQ=255)
                          ccTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCaaa                                                                           >  2:2759434/1‑100 (MQ=255)
                           ctgctgAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGCGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCaaaa                                                                          <  1:2208599/100‑1 (MQ=255)
                            tgctgAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCaaaaa                                                                         >  2:1850977/1‑100 (MQ=255)
                                gAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCtt                                                                     <  2:608502/100‑1 (MQ=255)
                                  aGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTan                                                                   <  2:3151510/100‑2 (MQ=255)
                                  aGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTAt                                                                   <  2:2678017/100‑1 (MQ=255)
                                     gTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTAtttt                                                                <  2:679261/100‑1 (MQ=255)
                                     gTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTAtttt                                                                >  2:1030766/1‑100 (MQ=255)
                                      tAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTc                                                               <  1:2842180/100‑1 (MQ=255)
                                       aataagttCGACAAGGTGGGGATATGCGTGGTGGGTGATTATTAGAGTTTGAACGACTGCGTAAGCCGACATAAAAATCCAGGCAAAAAGCTTATTTTCa                                                              <  1:2530509/94‑1 (MQ=255)
                                         aaaCTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGc                                                            <  2:2241914/100‑1 (MQ=255)
                                            cTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCttt                                                         >  1:472085/1‑100 (MQ=255)
                                            cTTCGGAAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATACAGGCAAAAAGCTTATTTTCAGCtat                                                         >  1:2895759/1‑98 (MQ=255)
                                               cagCAAAGTCGTGAGCCGCGTGGCGTTTGATGAAAAAAGTTTCAACGGCGGCTTAAGCCGCCATAAAAAAACAGACAAAAAGCTTATTTTCAGCTttaa                                                       <  1:2759390/97‑1 (MQ=255)
                                                 gCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTttaatta                                                    >  1:676020/1‑100 (MQ=255)
                                                 gCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTttaatta                                                    <  2:2755876/100‑1 (MQ=255)
                                                  cAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTttaattaa                                                   >  1:2640510/1‑100 (MQ=255)
                                                  cAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAAGCCAGGCAAAAAGCTTATTTTCAGCTttaatta                                                    <  2:3094634/99‑1 (MQ=255)
                                                   aaaGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATtaac                                                  <  2:890068/100‑1 (MQ=255)
                                                    aaGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATtaact                                                 <  2:2116479/100‑1 (MQ=255)
                                                        ggtgATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAAcc                                             <  2:831566/100‑1 (MQ=255)
                                                          tgATCCGCGTGGCGGGTGATGATTAAAGTTTCCACGGCGGCGTAAGCCGCCATAAAAATCCCGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACcac                                           >  1:2814981/1‑100 (MQ=255)
                                                           gATCCGCGTGGCGGGTGATGATTAAAATTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACcaca                                          >  1:3139677/1‑100 (MQ=255)
                                                             tCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCAcatc                                        >  2:1077081/1‑100 (MQ=255)
                                                              ccGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCAcatca                                       <  1:2202969/100‑1 (MQ=255)
                                                              ccGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCAcatca                                       >  2:1676692/1‑100 (MQ=255)
                                                               cgcgTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCAcatcat                                      >  2:903383/1‑100 (MQ=255)
                                                                  gTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGt                                   <  1:631318/100‑1 (MQ=255)
                                                                   tGGCGGGTGATGATTAAAGTTTCAACGGCGGCCTAAAAATAAATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGtt                                  <  1:2443828/100‑1 (MQ=255)
                                                                    ggCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTc                                 <  1:784420/100‑1 (MQ=255)
                                                                    ggCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTc                                 <  1:818279/100‑1 (MQ=255)
                                                                       gggTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTctgc                              <  2:17650/100‑1 (MQ=255)
                                                                       gggTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTctgc                              <  2:203384/100‑1 (MQ=255)
                                                                         gTGATGATTAAAGTGTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTctgctg                            <  1:2369101/100‑1 (MQ=255)
                                                                           gatgatTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTgctgct                          >  2:3209941/1‑100 (MQ=255)
                                                                           gatgatTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTgctgct                          <  1:2856229/100‑1 (MQ=255)
                                                                            atgatTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCta                         <  1:1030753/100‑1 (MQ=255)
                                                                               atTAAAGTGTCAACGGCGCCGTAGGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGATTTAATTATCTAACCACATTATTGTTCTGCTGCtaat                       <  1:1288491/99‑1 (MQ=255)
                                                                                  aaaGTTTCAACGGCGGCGTAAGCCGCCATAAAAAAAAAAAAAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATaaca                   <  1:2355834/100‑1 (MQ=255)
                                                                                    gatttttatggcggcTTACGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATaacaac                 >  2:1112844/10‑100 (MQ=255)
                                                                                       ttCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACaaa              >  2:2831335/1‑100 (MQ=255)
                                                                                        tttatggcggcTTACGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAg             >  1:2057604/6‑100 (MQ=255)
                                                                                        tCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAg             <  2:3461006/100‑1 (MQ=255)
                                                                                         ttatggcggcTTACGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAgg            >  2:279259/5‑100 (MQ=255)
                                                                                         ttatggcggcTTACGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAgg            >  2:1455959/5‑100 (MQ=255)
                                                                                         cAACGGCGGTGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAg             <  2:2369967/99‑1 (MQ=255)
                                                                                         cAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAgg            <  2:2578556/100‑1 (MQ=255)
                                                                                          tatggcggcTTACGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGt           >  2:443319/4‑100 (MQ=255)
                                                                                          tatggcggcTTACGCAGCCATAACCATACAGGCAAAAAGCCTATATTACGCTTTAATTAACTAACCCCATCCTTGTTCTGCCGCCAATAAaaccaacg             >  1:2816168/4‑96 (MQ=255)
                                                                                           atggcggcTTACGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTg          >  2:3171067/3‑100 (MQ=255)
                                                                                           atggcggcTTACGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTg          >  2:2877362/3‑100 (MQ=255)
                                                                                           atggcggcTTACGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTg          >  1:1014623/3‑100 (MQ=255)
                                                                                           aCGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTg          <  1:3062314/100‑1 (MQ=255)
                                                                                           aCGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTg          <  2:1692918/100‑1 (MQ=255)
                                                                                            tggcggcTTACGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTg          >  2:3130275/2‑99 (MQ=255)
                                                                                            tggcggcTTACGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTGa         >  2:175036/2‑100 (MQ=255)
                                                                                            tggcggcTTACGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTGa         >  2:1948030/2‑100 (MQ=255)
                                                                                            cggcggCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTGa         <  2:1320339/100‑1 (MQ=255)
                                                                                             ggcggcTTACGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTGAg        >  1:2996267/1‑100 (MQ=255)
                                                                                              gcggcgTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTGAGt       <  1:2302630/100‑1 (MQ=255)
                                                                                               cggcgTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTGAGTg      >  1:1598078/1‑100 (MQ=255)
                                                                                                 gcgTAAGCTGCCATAAAAACGCATGCAAAAAGCTTGTTTTCAGCTTTAATTAACTACCAACAGCAGTGTTCTGCTGCCAATACCAGCAAAGGTg          <  1:1750828/94‑1 (MQ=255)
                                                                                                 gcgTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTGAGTGGt    <  2:955072/100‑1 (MQ=255)
                                                                                                   gTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTGAGTGGttt  >  1:3422076/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAAGTTTCAACGGCGGCGTAAGCCGCCATAAAAATCCAGGCAAAAAGCTTATTTTCAGCTTTAATTAACTAACCACATCATTGTTCTGCTGCTAATAACAACAAAGGTGAGTGGTTT  >  NC_000913/1519981‑1520179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: