| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,017 | 0 | C | T | 35.1% | 332.2 / 229.4 | 269 | intergenic (‑227/+81) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base C (82/77); new base T (82/4); total (188/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.03e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.98e-01 | |||||||||||
Only 100 of 270 total aligned reads displayed.
CCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTT > NC_000913/3705921‑3706116 | ccACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACAtt < 2:1550325/100‑1 (MQ=255) aCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGc < 2:780017/100‑1 (MQ=255) tataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑At‑‑t > 2:1016478/1‑100 (MQ=255) taCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑At‑‑ttt < 2:212359/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTc > 1:1693706/1‑99 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑g < 2:1099787/100‑1 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGGGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑Gt > 1:1851281/1‑100 (MQ=255) gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTa > 1:1985488/1‑100 (MQ=255) ggcataaaCAAAGCGCACTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAg > 2:2701999/8‑100 (MQ=18) aTTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAg > 2:1950292/1‑100 (MQ=255) tgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGc < 2:1707828/100‑1 (MQ=255) gACAAAGTGCGCTTTGGTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTg > 2:511868/1‑99 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATa > 1:3334857/1‑100 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATa > 2:1754236/1‑100 (MQ=255) gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGTCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCg < 2:1683037/100‑1 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTTAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGTCTGATAAGCGGAg < 1:2149784/100‑1 (MQ=255) tttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAgcgc < 1:511862/100‑1 (MQ=255) tgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑‑CCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCa > 2:2587878/6‑100 (MQ=21) ttATGCCGGAGGCGGCGTTAACGCCTTGTCCGGCCTAC‑AAAATCGTGCAAATTGAATACATTGCA‑GA‑AT‑‑GTTC‑‑GTAGGCCTGAGAAGCGGAGCGCATCAg > 1:2027701/1‑100 (MQ=18) gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATC‑CCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:2219361/5‑100 (MQ=18) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑‑CCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:2786412/5‑100 (MQ=21) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GG‑AG‑‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 1:2357101/5‑100 (MQ=21) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAgg > 2:1173356/1‑100 (MQ=255) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGCATGG‑GC‑‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:3042451/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGCA‑TG‑AG‑‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCa > 2:1134503/3‑97 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GG‑AG‑‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1230055/3‑100 (MQ=21) aggCCGGATAAGGCGTTCACGCCGCATCCGGCATAC‑AAAACTGTGCAAATTCAATATATTGCA‑GG‑AA‑‑ACAC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGc > 1:381332/3‑100 (MQ=18) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGc > 2:409009/1‑100 (MQ=255) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGc < 2:265218/100‑1 (MQ=255) ggtcggataaggcgTTCACGCCGCATCCGACCCAC‑AAAGTCTTGCAAAATCAATAAATTGCAGGA‑AC‑‑GAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2732408/11‑100 (MQ=21) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAACAGTGCAAATTCAATATATTGCA‑AT‑CT‑‑TCTG‑‑GTAGGCCTGATAAGCATCGCGCATCAGGCa > 2:3306163/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGCA‑TG‑AG‑‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCa > 2:2083269/2‑96 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACCTGCAAATTCAATATATTGCA‑GG‑AT‑‑ACGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:843489/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGACTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑A‑AT‑‑CTCCGTGTAGGCCTGATAAGCGTAGAGCATCAGGCa > 1:2289709/2‑100 (MQ=18) ggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa > 1:1578152/2‑100 (MQ=17) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:2828268/1‑100 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATC‑CCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 2:1851877/1‑100 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑AC‑‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 2:2512027/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGAT‑CG‑AT‑‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 2:634121/1‑99 (MQ=21) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACCTGCAAATTCAATATATTGCA‑GG‑AT‑‑ACGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 2:2739321/1‑99 (MQ=17) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GG‑AG‑‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 1:102586/1‑100 (MQ=21) ctggataaggcgTTCACGCCGCATCCAGCCTAC‑AAAATTGTGCAAAATCAATGGATTGCA‑CA‑GC‑‑TAGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaga > 2:59344/9‑98 (MQ=25) ccggataaggcgTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATC‑CCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAttt > 2:3093070/9‑100 (MQ=18) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGAT‑CG‑AT‑‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 1:1359262/9‑98 (MQ=18) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCATGAAAATTCAATACATTGCA‑AG‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCacg > 2:1298077/9‑98 (MQ=17) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCATGAAAATTCAATACATTGCA‑AG‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGTAGCGCAGCAgg > 1:3045634/9‑96 (MQ=14) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GG‑AG‑‑CTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 2:2280278/9‑98 (MQ=18) ctgataaggcgTTTACGCCTTATCAGGCCTAC‑AAGATCGTGCAAATTCAACATATTGC‑‑CA‑CT‑‑CACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCaat > 2:2460863/8‑98 (MQ=25) cggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTACA‑GA‑GT‑‑TCAC‑‑GTAGGACTGATAAGCGTAGCGCATCAGGCagtt > 1:2069487/8‑97 (MQ=17) cggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaatc > 2:2945656/8‑97 (MQ=25) cggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCAGGG‑AC‑‑TAT‑‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCagct > 2:3039669/8‑97 (MQ=18) cggataaggcgTTCACGCCGCATCCGACCCAC‑AAAGTCTTGCAAAATCAATAAATTGCAGGA‑AC‑‑GAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaact > 2:417322/8‑97 (MQ=25) ggataaggcgTTTACGCCTTATCCGGCCTAC‑AAATTCTTCCAAATTCAATATATTGCA‑GA‑AA‑‑TCAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAattt > 1:642239/7‑100 (MQ=18) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCGAATTCAATATATTGCA‑GA‑GC‑‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:1900459/7‑100 (MQ=17) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:3447080/7‑100 (MQ=17) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:1664766/7‑100 (MQ=17) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAATGTGCAAATTCAATAAATTGCA‑‑A‑TTCAACTT‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaatt > 2:821523/7‑97 (MQ=21) ggataaggcgTTCACGCCGCATCCTGCCTAC‑AAAAGCACGCAAATTCAATATATTGCA‑GA‑GA‑‑TGGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttt > 2:743749/7‑100 (MQ=14) ggataaggcgTTCACGCCGCATCCGGCGTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GG‑CT‑‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:923982/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCATGAAAATTCAATACATTGCA‑AG‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCacgct > 2:2864781/7‑96 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGCA‑GA‑GA‑‑TCAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAattt > 1:324604/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCAGGG‑AC‑‑TAT‑‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCagctt > 1:2680959/7‑96 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCA‑GAGAT‑‑TAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAattt > 2:1387556/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GG‑AG‑‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttat > 2:1994532/7‑98 (MQ=21) ggataaggcgTTCACGCCGCATCCGACCCAC‑AAAGTCTTGCAAAATCAATAAATTGCAGGA‑AC‑‑GAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaacta > 2:2407115/7‑96 (MQ=25) gataaggcgTTTACGCCGCATCCGGCCTAC‑AAAACAGTGCAAATTCAATATATTGCA‑AT‑CT‑‑TCTG‑‑GTAGGCCTGATAAGCATCGCGCATCAGGCaagctt > 2:1538955/6‑95 (MQ=21) gataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGCA‑GAGAT‑‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAattta > 1:2575390/6‑99 (MQ=17) gataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCA‑GG‑GA‑‑CTAT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCagcttt > 2:3387718/6‑95 (MQ=21) gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 1:2951246/100‑1 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 2:2561252/100‑1 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCTGGCATTtttgcgt < 2:2359807/100‑3 (MQ=255) ggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑‑CCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaattctgtgtt < 1:2226081/100‑11 (MQ=25) ggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGAGAATCAGGCATTtttgc > 1:3231777/1‑97 (MQ=255) gcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgccttt < 2:2314379/100‑1 (MQ=255) cgTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCA‑GA‑GA‑‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAATtttgcgtttg > 1:131119/1‑100 (MQ=17) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 2:36698/100‑1 (MQ=255) gTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgc > 2:950791/1‑100 (MQ=255) gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg < 2:3009335/100‑1 (MQ=255) cTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTc > 2:2888958/1‑100 (MQ=255) ttATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TATC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGt > 1:2197750/1‑98 (MQ=255) aTCCGGCCTAC‑AAAATCGTGTAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg < 2:1961075/100‑1 (MQ=255) aTCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg < 2:3209479/100‑1 (MQ=255) aTCCAGCCTAC‑AAAATCGTGCAAATTTAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGAATCAGGCCTTTTTGCATTTGCCATTAGTCTTg > 1:912106/1‑100 (MQ=21) tCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGt < 1:1725289/100‑1 (MQ=255) ccGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTTTTGTa > 1:1289863/1‑100 (MQ=255) cGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt > 1:1458871/1‑100 (MQ=255) ccTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc < 1:2533937/100‑1 (MQ=255) tAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt < 1:3357653/100‑1 (MQ=255) aaaaTCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt < 2:1223838/99‑1 (MQ=255) tGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc > 2:3233226/1‑100 (MQ=255) tGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc > 2:3370788/1‑100 (MQ=255) cAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGa > 1:3430093/1‑100 (MQ=255) aaTTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATa < 2:2151185/100‑1 (MQ=255) aaTTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATa < 1:2452864/100‑1 (MQ=255) ttCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATaga > 1:2779279/1‑100 (MQ=255) ttCAATACATTGCA‑GA‑AT‑‑TTTC‑‑CTAGGCCTGATAAGCGGAGCGCATAATGCATATTTGCCTTTGCCATCAGGCTTGTATGGCTTTTAATTATTCGATa > 1:706362/1‑98 (MQ=37) cAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga < 1:1059153/100‑1 (MQ=255) aTACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACg < 1:495953/100‑1 (MQ=255) aCATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGtt > 1:1541030/1‑100 (MQ=255) cATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGttt < 1:1200172/100‑1 (MQ=255) | CCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTT > NC_000913/3705921‑3706116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |