Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,060,2610GT25.5% 281.9 / 104.3 149intergenic (+31/‑186)typA/yihLGTP‑binding protein/putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base G (54/57);  new base T (12/26);  total (66/83)
Fisher's exact test for biased strand distribution p-value = 8.85e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.29e-01

Only 100 of 153 total aligned reads displayed.

CGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTA  >  NC_000913/4060162‑4060360
                                                                                                   |                                                                                                    
cGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAg                                                                                                      >  2:3477386/1‑100 (MQ=255)
    ttCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt                                                                                                  <  2:453390/100‑1 (MQ=255)
    tccGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt                                                                                                  >  2:3437577/3‑100 (MQ=255)
     tCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATg                                                                                                 <  2:2235793/100‑1 (MQ=255)
     tCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCACCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATg                                                                                                 <  1:16123/100‑1 (MQ=255)
      cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATgg                                                                                                >  2:1340044/1‑100 (MQ=255)
      cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATga                                                                                                >  1:2235761/1‑99 (MQ=255)
       gTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGc                                                                                               <  1:1011271/100‑1 (MQ=255)
        tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCa                                                                                              >  2:688210/1‑100 (MQ=255)
        tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCa                                                                                              >  1:289335/1‑100 (MQ=255)
        tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCa                                                                                              <  2:25078/100‑1 (MQ=255)
         aaaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAg                                                                                             <  2:2917334/100‑1 (MQ=255)
          aaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAgg                                                                                            <  2:670152/100‑1 (MQ=255)
          aaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAgg                                                                                            <  2:1057704/100‑1 (MQ=255)
          aaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAgg                                                                                            <  2:227287/100‑1 (MQ=255)
          aaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAgg                                                                                            <  1:1756131/100‑1 (MQ=255)
           aCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑t                                                                                          <  2:524147/100‑1 (MQ=255)
           aCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑t                                                                                          <  1:3024854/100‑1 (MQ=255)
           aCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑t                                                                                          <  1:2569331/100‑1 (MQ=255)
           aCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGTAGG‑t                                                                                          >  2:1243014/1‑100 (MQ=255)
            cGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑tt                                                                                         <  1:1227902/100‑1 (MQ=255)
               cACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCCCCGAAAGACGATTAATTTCTTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttttt                                                                                      <  1:1898127/100‑1 (MQ=38)
               cACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttttt                                                                                      <  2:940787/100‑1 (MQ=255)
               cACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACAGAAAGACGATTAATTTCGTGTTTTAGTCCTAAAAAACCTGCCAGCGATGGCAGG‑ttttt                                                                                      >  1:851857/1‑100 (MQ=255)
                  cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttttttat                                                                                   <  1:2391816/100‑3 (MQ=255)
                  cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttttttat                                                                                   <  1:134661/100‑3 (MQ=255)
                  cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttttttat                                                                                   <  2:1920507/100‑3 (MQ=255)
                  cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttttttat                                                                                   <  1:3467808/100‑3 (MQ=255)
                  cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑tttttttt                                                                                   >  2:3268657/1‑100 (MQ=255)
                  atctcGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttttttat                                                                                   <  1:1633121/96‑3 (MQ=38)
                   tgccGGAAAACGATCGTGGCCGCGCCAACCTCGCACCGAAAGACGCTTCATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAAG‑tttttta                                                                                    <  1:394802/95‑2 (MQ=37)
                   tGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑ttttttttt                                                                                  <  2:882593/100‑1 (MQ=255)
                    gACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTg                                                                                 <  2:1046795/100‑1 (MQ=255)
                     aCGGAAAACGATCGTCGCCGCGCCAACCGCGGACCGAAAGACGATTAATTTCTTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttttttatgac                                                                                <  2:1642731/100‑6 (MQ=37)
                     aCGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGGCGATTAATTTCGTTTTTTAGCCATAAAAAGCCTGCCAGCGATGGTAGG‑ttttttttgcc                                                                                <  1:2144635/100‑4 (MQ=255)
                     aCGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGc                                                                                <  2:3336868/100‑1 (MQ=255)
                     aCGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGc                                                                                <  2:1974986/100‑1 (MQ=255)
                      cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttttttatagat                                                                               >  2:1633143/1‑94 (MQ=38)
                      cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGcc                                                                               <  2:2166384/100‑1 (MQ=255)
                      cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGcc                                                                               >  2:3489/1‑100 (MQ=255)
                      cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGcc                                                                               <  1:2980931/100‑1 (MQ=255)
                      cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGcc                                                                               <  1:1676851/100‑1 (MQ=255)
                       ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCt                                                                              <  1:668189/100‑1 (MQ=255)
                       ggAAAACGATCGACGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCt                                                                              >  2:2290548/1‑100 (MQ=255)
                        gAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTg                                                                             >  2:164369/1‑100 (MQ=255)
                        gAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTg                                                                             >  2:85375/1‑100 (MQ=255)
                          aaaCGATCGTCGCAGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTTCATGt                                                                            >  1:2806614/1‑99 (MQ=255)
                             cGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTg                                                                        <  2:2351113/100‑1 (MQ=255)
                             cGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTg                                                                        <  2:1436619/100‑1 (MQ=255)
                               aTCGTCGCCGCGCCAACCGCGCACCGAAAGACGAGTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGGCCTGTCGTGAg                                                                      <  1:1519939/100‑1 (MQ=255)
                                tcgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAgc                                                                     <  1:1936357/100‑1 (MQ=255)
                                tcgtcgCCGCCCCAACCGCGCACCAAAAGACGATTAATTTCGTTTTTTAGTCATAAACAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAgc                                                                     <  1:1666799/100‑1 (MQ=255)
                                  gtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAgcgc                                                                   <  2:3028235/100‑1 (MQ=255)
                                    cgccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGcac                                                                 >  1:3362834/1‑100 (MQ=255)
                                             aaCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCg                                                        <  2:1292163/100‑1 (MQ=255)
                                             aaCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCg                                                        <  2:3298048/100‑1 (MQ=255)
                                               ccGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg                                                      <  2:2607291/100‑1 (MQ=255)
                                               ccGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg                                                      <  1:2252275/100‑1 (MQ=255)
                                                      ccGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAtcaga                                               >  2:2998290/1‑97 (MQ=255)
                                                       cGAAAGACGATTTATTTCGTTTTTTAGTCATGAAAAAGCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTccc                                              <  1:2349164/100‑1 (MQ=255)
                                                         aaaGACGTTTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCtt                                            >  2:1827466/1‑100 (MQ=255)
                                                           aGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtat                                          <  2:1100070/100‑1 (MQ=255)
                                                            gACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtata                                         <  1:2752838/100‑1 (MQ=255)
                                                             aCGATTAATTTCGTTTTTTAGTCATAAAATACCTGCCAGCGATGGCAGGTTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtata                                         <  1:3223463/100‑1 (MQ=255)
                                                               gATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTTCCTTATAAg                                       >  1:2257513/1‑99 (MQ=255)
                                                                aTTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTc                                     <  2:2497693/100‑1 (MQ=255)
                                                                aTTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTc                                     >  2:3123000/1‑100 (MQ=255)
                                                                 ttAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCt                                    >  2:656617/1‑100 (MQ=255)
                                                                    aTTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgtg                                 >  2:121682/1‑100 (MQ=255)
                                                                      ttCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGt                               >  2:3436833/1‑100 (MQ=255)
                                                                       tCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGtt                              <  1:1232001/100‑1 (MQ=255)
                                                                        cGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCGCACCAATGCGAGTATCTCCCTTATAAGTCTGTGGtt                              <  1:765244/99‑1 (MQ=255)
                                                                            ttttAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTc                         <  1:2001129/100‑1 (MQ=255)
                                                                            ttttAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTc                         >  1:650168/1‑100 (MQ=255)
                                                                                aGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATa                     >  2:2822956/1‑100 (MQ=255)
                                                                                  tCATAGAGAGCCGGCCAGCGAGGGGAGG‑TTTTTTTTTGCCTGTCGTGGGCGCACGCCGATGCCAGTAGCTCCCTGATAAGTCTGTGGGTACGTCAATa                     <  1:2746730/98‑1 (MQ=255)
                                                                                  caaaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATaga                   >  2:1069219/5‑100 (MQ=38)
                                                                                  caaaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATaga                   >  2:1398153/5‑100 (MQ=38)
                                                                                   cATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTTCCTGTCTTTTGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagag                  >  1:2516841/1‑100 (MQ=255)
                                                                                    aaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagaga                 >  1:468565/3‑100 (MQ=255)
                                                                                    aTAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagaga                 <  2:778917/100‑1 (MQ=255)
                                                                                     tAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTTCCTGTCGTGAGCGCACACCAACGCGCGTATCTCCCTTATAAGTCTGTGCTTACGTCAATcga                   >  1:13035/1‑97 (MQ=255)
                                                                                     tAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagagag                >  1:2765410/1‑100 (MQ=255)
                                                                                     tAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagagag                >  2:2399449/1‑100 (MQ=255)
                                                                                     aaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagagag                >  2:2818524/2‑100 (MQ=255)
                                                                                      aaaaaaCCTGCCATCGCTGGCAGGTTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagagag                >  2:242436/1‑100 (MQ=38)
                                                                                      aaaaaaCCTGCCAGCGGTGGCAGG‑TATTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCAGTGGTTACGTCATTaga                   >  1:3003241/1‑96 (MQ=255)
                                                                                      aaaaaaCCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGc               <  2:2752099/100‑1 (MQ=255)
                                                                                      aaaaaaCCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGc               >  2:1759352/1‑100 (MQ=255)
                                                                                        aaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTTTTTTTTTTTTTGCTTACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTTCGTCTATAGAGTGCtt             >  1:153868/1‑100 (MQ=16)
                                                                                        aaaaCCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCtt             >  2:2907873/1‑100 (MQ=255)
                                                                                         aaaCCTGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCttt            >  2:297006/1‑100 (MQ=255)
                                                                                           aCCTGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGt          >  2:3144401/1‑100 (MQ=255)
                                                                                            ccTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTc         <  2:3072752/100‑1 (MQ=255)
                                                                                            ccTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTc         <  2:1562929/100‑1 (MQ=255)
                                                                                             cTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTca        >  2:1383505/1‑100 (MQ=255)
                                                                                              tGCCATCGCTGGCAGG‑TTTTTTTTTGCCTGTCGTGAGAGCACACCACTGCGAGTATCTCCCTTCTAAGACTGTGGTTACGTCACTAGCGCGCTTTGTca        >  2:2027475/1‑99 (MQ=255)
                                                                                              tGCCAGCGATGGCAGG‑TTTTTTTTTTTTTTTTTTTAACGCACACCAATGCGAGTATATCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTTTcac       >  1:105867/1‑100 (MQ=255)
                                                                                                  aGCGATGGCAGG‑TCTTTTTTTTTCTGAACTGAGCGCACACCACTCCGATGATCTCCCATTTTAGTGAATGAGTAAGTCAGCAGAGAGCTTTGTcacatt    >  1:1733968/1‑97 (MQ=255)
                                                                                                   gCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTa  <  2:2760437/100‑1 (MQ=255)
                                                                                                   |                                                                                                    
CGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTA  >  NC_000913/4060162‑4060360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑