| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,279,021 | G→A | A247V (GCG→GTG) | bcr ← | bicyclomycin/cysteine/sulfonamide efflux transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,279,021 | 0 | G | A | 97.9% | 446.9 / ‑0.7 | 140 | A247V (GCG→GTG) | bcr | bicyclomycin/cysteine/sulfonamide efflux transporter |
| Reads supporting (aligned to +/- strand): ref base G (0/3); new base A (82/55); total (82/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.89e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.59e-01 | |||||||||||
Only 100 of 146 total aligned reads displayed.
TTAACGCGCCAATGCGGCGGACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCGCGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCATGTAGCTCAGGA > NC_000913/2278923‑2279117 | ttAACGCGCCAATGCGGCGGACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGgcgc > 2:1550015/1‑100 (MQ=255) cgcgCCAATGCGGCGGACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCacgacg > 2:649559/1‑100 (MQ=255) cgcgCCAATGCGGCGGACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCacgacg < 2:1739090/100‑1 (MQ=255) gcgcCAATGCGGCGGACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGt > 2:1164288/1‑100 (MQ=255) cgcCAATGCGGCGGACGAAGCGGCTGCTAAAGATGGTCATCACGAACAGCAAAACCATGTTTAGCGCAAAGTAATAACCAAAGATTTCCGGCacgacggg > 2:1165521/1‑98 (MQ=255) ccAATGCGGCGGACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGt > 1:2742859/1‑100 (MQ=255) aTGCGGCGGACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTaa < 2:902443/100‑1 (MQ=255) tGCGGCGGACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAAt < 1:432806/100‑1 (MQ=255) cggcggACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAAttt < 1:1242136/100‑1 (MQ=255) ggcggACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCACATTTTTCCGGCACGACGTGGTTAATTTc > 2:129983/1‑100 (MQ=255) ggcggACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTc < 2:1114197/100‑1 (MQ=255) gcggACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCa < 2:258974/100‑1 (MQ=255) aggACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCaa > 1:852794/2‑100 (MQ=255) gACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAata < 1:1787613/100‑1 (MQ=255) aaGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATaaa > 1:1919580/1‑100 (MQ=255) aaGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATaaa > 1:2130985/1‑100 (MQ=255) ttccatctttAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATaaac < 1:2965572/92‑1 (MQ=255) aGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATaaac < 1:1052173/100‑1 (MQ=255) ggCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATaaacaaa > 2:2161176/1‑100 (MQ=255) ggCTGTTAAAGATGGACATAACGAACAGAAAAACAATGGTTAGCGCAAAGTAATAACCAAAATTTTCCGGCACGACGTGGTTAATTTCAATATaaacaaa < 1:1490352/100‑1 (MQ=255) gCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATaaacaaac > 2:2907042/1‑100 (MQ=255) cTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACg > 2:2786184/1‑100 (MQ=255) cTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACg > 2:1833386/1‑100 (MQ=255) cTGTTAAAGATGGTCATCACGAACAGAAAAACAATGATTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACg > 2:2452003/1‑100 (MQ=255) tGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACgg < 2:2043775/100‑1 (MQ=255) tGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACgg > 2:2160190/1‑100 (MQ=255) gTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGt > 2:3166335/1‑100 (MQ=255) tAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTcc < 1:412774/100‑1 (MQ=255) tAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTcc > 2:2462226/1‑100 (MQ=255) aaGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCgg > 2:1058168/1‑100 (MQ=255) aaGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCgg > 2:3202771/1‑100 (MQ=255) aGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGgc < 2:1998883/100‑1 (MQ=255) aGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGgc > 2:3082571/1‑100 (MQ=255) aGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGgc < 1:2525705/100‑1 (MQ=255) gATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGgcg > 1:2578434/1‑100 (MQ=255) gATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGgcg > 2:2995896/1‑100 (MQ=255) aTGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGgcgc < 1:1907984/100‑1 (MQ=255) ggTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCtt < 1:1348795/100‑1 (MQ=255) gTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTa > 1:363452/1‑100 (MQ=255) gTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTa > 2:1056418/1‑100 (MQ=255) tcaCGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGaa > 1:3226792/1‑100 (MQ=255) caCGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAAt > 2:1443267/1‑100 (MQ=255) caCGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTACGGCACGACGTGGTTAATTTAAATATAAACAAACGGTCCGGCGCTTAAGAAt > 1:484918/1‑100 (MQ=255) aCGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATg < 1:2368931/100‑1 (MQ=255) aCGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATg < 2:3103348/100‑1 (MQ=255) aCGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATg > 2:477134/1‑100 (MQ=255) cGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATga > 1:3404197/1‑100 (MQ=255) aaCAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATgaga < 1:1191123/100‑1 (MQ=255) aaCAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATgaga < 1:1074246/100‑1 (MQ=255) aCAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCGCGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGaa < 2:941141/100‑1 (MQ=255) aCAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGaa < 2:1959047/100‑1 (MQ=255) cAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAAc > 1:843003/1‑100 (MQ=255) cAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAAc < 1:1976268/100‑1 (MQ=255) cAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAAc > 2:1730983/1‑100 (MQ=255) aGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACa > 1:1417517/1‑100 (MQ=255) gAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACAt > 1:2729811/1‑100 (MQ=255) aaaCAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATccc < 2:1477615/100‑1 (MQ=255) aaaCAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATccc < 2:1480825/100‑1 (MQ=255) aCAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCgg > 2:1121022/1‑100 (MQ=255) aCAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCgg < 1:649551/100‑1 (MQ=255) aCAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCgg < 2:2729854/100‑1 (MQ=255) aCAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCgg > 2:3458956/1‑100 (MQ=255) cAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGc < 2:1927193/100‑1 (MQ=255) cAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGc < 2:3225910/100‑1 (MQ=255) cAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGc < 1:1359648/100‑1 (MQ=255) cAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGc > 2:343835/1‑100 (MQ=255) cAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCAGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCGTAAGAATGAGAACAACCCgg > 1:2896146/1‑99 (MQ=255) tAGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTg < 1:2516869/100‑1 (MQ=255) aGCGCAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGa < 1:2786140/100‑1 (MQ=255) gcgcAAAGTAATAACCAAAGTTTTCCGGCGCGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGaa < 2:860792/100‑1 (MQ=255) gcgcAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGaa < 1:196859/100‑1 (MQ=255) gcgcAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGaa > 2:2965392/1‑100 (MQ=255) cAAAGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCACGGCAAAGCTGAAAcc > 1:2922700/1‑100 (MQ=255) aaGTAATAACCAAATTTTTCAGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAAcc < 1:3434251/98‑1 (MQ=255) aaGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCAc > 1:1615150/1‑100 (MQ=255) aGTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACt < 2:3365128/100‑1 (MQ=255) tccgatctcAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTg < 2:428236/92‑1 (MQ=255) gTAATAACCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATACCGGCAAAGCTGAAACCACTg > 1:3103502/1‑100 (MQ=255) taataaCCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTgg < 2:1748452/100‑1 (MQ=255) aataaCCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGc > 1:169036/1‑100 (MQ=255) ataaCCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCa < 2:446157/100‑1 (MQ=255) aaCCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAg < 1:2463469/100‑1 (MQ=255) aCCAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGc < 2:501660/100‑1 (MQ=255) ccAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCa < 1:3309816/100‑1 (MQ=255) ccAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCa > 2:1536561/1‑100 (MQ=255) ccAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCa > 2:661642/1‑100 (MQ=255) ccAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCa > 2:37615/1‑100 (MQ=255) cAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCAt > 2:1823234/1‑100 (MQ=255) cAAAGTTTTCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGACAAGCa > 1:3249492/1‑99 (MQ=255) ttttCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCATGTAGc < 1:1056404/100‑1 (MQ=255) ttttCCGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCATGTAGc < 2:1117720/100‑1 (MQ=255) ccGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCATGTAGCTCAg > 1:2046160/1‑100 (MQ=255) ccGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCATGTAGCTCAg > 1:2636078/1‑100 (MQ=255) ccGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCATGTAGCTCAg > 1:3013354/1‑100 (MQ=255) ccGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCATGTAGCTCAg < 1:60480/100‑1 (MQ=255) cGGCACGGCGTGGTTAATTGCAATATAAATAAACGGTCCGGCGCTTAAGAATGAGAACATACCGGCAAAGCTGGAACCACTGCCAAGCATGTAGCTCacg > 1:2954042/1‑98 (MQ=255) cGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCATGTAGCTCAgg > 2:858489/1‑100 (MQ=255) cGGCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCATGTAGCTCAgg > 1:680701/1‑100 (MQ=255) ggCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCATGTAGCTCAGGa > 2:3281520/1‑100 (MQ=255) ggCACGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCATGTAGCTCAGGa > 1:56932/1‑100 (MQ=255) | TTAACGCGCCAATGCGGCGGACGAAGCGGCTGTTAAAGATGGTCATCACGAACAGAAAAACAATGTTTAGCGCAAAGTAATAACCAAAGTTTTCCGGCGCGACGTGGTTAATTTCAATATAAACAAACGGTCCGGCGCTTAAGAATGAGAACATCCCGGCAAAGCTGAAACCACTGGCAAGCATGTAGCTCAGGA > NC_000913/2278923‑2279117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |