BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,017,924	G→A	D198N (GAC→AAC)	rmuC →	DNA recombination protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,017,924	0	G	A	100.0%	401.9 / NA	118	D198N (GAC→AAC)	rmuC	DNA recombination protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (54/64); total (54/64)

Only 100 of 118 total aligned reads displayed.

AGAACGCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCGACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGTC  >  NC_000913/4017827‑4018019

aGAACGCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAAc                                                                                               >  1:136745/1‑100 (MQ=255)

aGAACGCCATACACTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAAc                                                                                               >  2:2482961/1‑100 (MQ=255)

 gAACGCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCATATGGCCCAGGAAGCGATCAACCTGACGCGAGCGCTGAAAGGCAACa                                                                                              >  1:2035715/1‑100 (MQ=255)

 gAACGCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACa                                                                                              <  1:141826/100‑1 (MQ=255)

    cGCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATa                                                                                           <  1:876372/100‑1 (MQ=255)

    cGCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATa                                                                                           <  2:132780/100‑1 (MQ=255)

     gCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATaa                                                                                          <  2:1472155/100‑1 (MQ=255)

     gCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATaa                                                                                          <  1:834072/100‑1 (MQ=255)

      ccATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACACTaaa                                                                                         >  1:548187/1‑100 (MQ=255)

      ccATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATaaa                                                                                         >  1:1339202/1‑100 (MQ=255)

      ccATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATaaa                                                                                         >  1:2660609/1‑100 (MQ=255)

       cATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATaaaa                                                                                        <  2:2390716/100‑1 (MQ=255)

       cATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATaaaa                                                                                        <  2:2458028/100‑1 (MQ=255)

        aTACCCTGACCCACGAAATTCGCAAACTCCAGCAACTCAACGCGCAAATGGCGCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGAAACAATAAAAc                                                                                       <  1:1976550/100‑1 (MQ=255)

         tACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCCAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAAcc                                                                                      >  1:551089/1‑100 (MQ=255)

           cccTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCa                                                                                    >  2:1101524/1‑100 (MQ=255)

             cTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAgg                                                                                  <  2:2389631/100‑1 (MQ=255)

             cTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAgg                                                                                  <  1:3018786/100‑1 (MQ=255)

             cTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAgg                                                                                  <  2:2764621/100‑1 (MQ=255)

              tGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAggg                                                                                 >  1:1989578/1‑100 (MQ=255)

               gACCCACGAAAATCGCACTCTCCCGCACCTCAACGCGCAAATGGAACAGGAAGACATCAACCTGGCGCGCGCGCTGAACGGCAACATTAAACCCCAggg                                                                                 <  1:286153/99‑1 (MQ=255)

                  ccACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAAc                                                                             <  1:2794301/100‑1 (MQ=255)

                   caagAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAAACCAGGGCAACt                                                                            >  2:1015675/4‑100 (MQ=255)

                   cACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACt                                                                            >  1:1794699/1‑100 (MQ=255)

                   cACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACt                                                                            <  1:2389079/100‑1 (MQ=255)

                         aTTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCg                                                                      >  1:1226703/1‑100 (MQ=255)

                            cttccgatctaGCAACTCAACGCGCAAATGGACCAGGTAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAgg                                                                   <  1:2339279/90‑1 (MQ=255)

                            cGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAgg                                                                   <  1:3154332/100‑1 (MQ=255)

                            cGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAgg                                                                   <  1:2464563/100‑1 (MQ=255)

                            cGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAgg                                                                   >  1:2587180/1‑100 (MQ=255)

                            cGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAgg                                                                   <  2:2754125/100‑1 (MQ=255)

                            cGCAATCGCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAgg                                                                   <  1:309282/100‑1 (MQ=255)

                             gCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGgt                                                                  >  2:2601250/1‑100 (MQ=255)

                               aaTCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGgtag                                                                >  1:391694/1‑100 (MQ=255)

                                 tctcCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGgtagtg                                                              >  2:3264/1‑99 (MQ=255)

                                  ctcCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTAt                                                             <  1:3165201/100‑1 (MQ=255)

                                   tcCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTAtt                                                            >  2:2658707/1‑100 (MQ=255)

                                   tcCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTAtt                                                            >  2:3139268/1‑100 (MQ=255)

                                   tcCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTAtt                                                            >  2:3294035/1‑100 (MQ=255)

                                    ccAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTg                                                           >  2:846864/1‑100 (MQ=255)

                                    ccAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTg                                                           <  1:3392612/100‑1 (MQ=255)

                                    ccAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTg                                                           >  1:413730/1‑100 (MQ=255)

                                    ccAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGACGAGGTAGTATTg                                                           >  2:378087/1‑100 (MQ=255)

                                       gCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGAcg                                                        <  1:1368849/100‑1 (MQ=255)

                                        cAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGAcgc                                                       <  2:1587911/100‑1 (MQ=255)

                                         aaCTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGAcgcg                                                      <  1:1166742/100‑1 (MQ=255)

                                           cTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCggg                                                    <  1:487664/100‑1 (MQ=255)

                                           cTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCggg                                                    <  2:675819/100‑1 (MQ=255)

                                           cTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCggg                                                    <  1:3054294/100‑1 (MQ=255)

                                            tCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGAGCAACTGGGGCGAGGTATTATTGAcg                                                        >  2:3096679/1‑95 (MQ=255)

                                             cAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTg                                                  >  1:1983689/1‑100 (MQ=255)

                                             cAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTg                                                  >  1:148906/1‑100 (MQ=255)

                                             cAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTg                                                  >  1:2921449/1‑100 (MQ=255)

                                              aaCGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGGATTGACGCGGGGGc                                                 >  1:9279/1‑100 (MQ=255)

                                               aCGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCt                                                <  2:16074/100‑1 (MQ=255)

                                                 gcgcAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTgg                                              >  2:2662359/1‑100 (MQ=255)

                                                  cgcAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGCATTGACGCGGGTGCTGGa                                             >  1:1735466/1‑100 (MQ=255)

                                                   gcAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTGTTGACGCGGGTGCTGGAg                                            <  1:3264/100‑1 (MQ=255)

                                                   gcAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAg                                            >  2:345769/1‑100 (MQ=255)

                                                        tGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTc                                       >  1:1874294/1‑100 (MQ=255)

                                                           cccAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGTGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCgg                                    <  1:2141363/100‑1 (MQ=255)

                                                           cccAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCgg                                    >  2:3432485/1‑100 (MQ=255)

                                                           cccAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCgg                                    <  1:2490910/100‑1 (MQ=255)

                                                            ccAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTTGAGGCTTCCgg                                    <  1:122288/99‑1 (MQ=255)

                                                              aGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCt                                 <  2:1334461/100‑1 (MQ=255)

                                                                 aaGCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCg                              <  2:223978/100‑1 (MQ=255)

                                                                   gCGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTg                            >  2:944012/1‑100 (MQ=255)

                                                                   gCGATAACCCGGACGCGAGCGCTGAAAGGCAACAATAAAACCCAGGCCAACTGGGGCGAGGTAGTATTTGCGCGGGTGCTGGAGGCTTCCGGTCTGCGTg                            <  1:806985/100‑1 (MQ=255)

                                                                    cGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCATGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGa                           <  2:3095832/100‑1 (MQ=255)

                                                                    cGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGa                           >  1:1814436/1‑100 (MQ=255)

                                                                    cGATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGa                           >  2:2192128/1‑100 (MQ=255)

                                                                    cGATAAACCTGACGCGCGCGCTGAAAGGCAACAATATAACCCAGGGCGACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCt                                 <  1:1040124/94‑1 (MQ=255)

                                                                     gATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTTGGGCGAGGTAGGATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGaa                          <  1:1576242/100‑1 (MQ=255)

                                                                     gATCAACCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGaa                          >  2:3385356/1‑100 (MQ=255)

                                                                          aCCTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGta                     >  2:2141575/1‑100 (MQ=255)

                                                                           ccTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtat                    <  2:2996473/100‑1 (MQ=255)

                                                                           ccTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtat                    <  2:957832/100‑1 (MQ=255)

                                                                           ccTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtat                    >  1:2620884/1‑100 (MQ=255)

                                                                            cTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatg                   <  1:2333198/100‑1 (MQ=255)

                                                                            cTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatg                   <  1:2707970/100‑1 (MQ=255)

                                                                            cTGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatg                   <  1:44404/100‑1 (MQ=255)

                                                                             tGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatga                  >  2:2408135/1‑100 (MQ=255)

                                                                             tGACGCGCGCGCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCCTCCGGTCTGCGTGAAGGGtatga                  <  2:84062/100‑1 (MQ=255)

                                                                                cgcgcgcgCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatgaata               >  1:1137099/1‑100 (MQ=255)

                                                                                cgcgcgcgCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatgaata               <  2:1547761/100‑1 (MQ=255)

                                                                                cgcgcgcgCTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatgaata               <  2:1983718/100‑1 (MQ=255)

                                                                                 gcgcgcgcTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatgaatat              <  2:523832/100‑1 (MQ=255)

                                                                                  cgcgcgcTGAAAGGCAATAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatgaatatg             <  1:2128534/100‑1 (MQ=255)

                                                                                  cgcgcgcTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatgaatatg             <  1:1401357/100‑1 (MQ=255)

                                                                                   gcgcgcTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatgaatatga            <  2:1273076/100‑1 (MQ=255)

                                                                                    cgcgcTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGtatgaatatgaa           <  2:266377/100‑1 (MQ=255)

                                                                                      cgcTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAAc         <  2:1485161/100‑1 (MQ=255)

                                                                                      cgcTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAAc         <  2:1797833/100‑1 (MQ=255)

                                                                                        cTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAAccc       >  2:1868801/1‑100 (MQ=255)

                                                                                        cTGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAAccc       >  2:1969346/1‑100 (MQ=255)

                                                                                         tGAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCa      <  2:178177/100‑1 (MQ=255)

                                                                                          gAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAg     >  1:59844/1‑100 (MQ=255)

                                                                                          gAAAGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAg     >  1:1459720/1‑100 (MQ=255)

                                                                                            aaGGCAACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGt   >  2:3393202/1‑100 (MQ=255)

                                                                                             aGGCAACAATAAAACCGCGGGCAACTGGGGCGAGGTAGTATTGACGCGGGCGCTGGAGGCTTCGGGTCTGGGTAAAGCGTAAGAATAAGAAACGCAGGTc  >  1:2555334/1‑100 (MQ=255)

AGAACGCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCGACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGTC  >  NC_000913/4017827‑4018019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`