BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,382,820	T→C	Y292H (TAT→CAT)	ompG →	outer membrane porin G

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,382,820	0	T	C	100.0%	440.8 / NA	125	Y292H (TAT→CAT)	ompG	outer membrane porin G
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (62/63); total (62/63)

Only 100 of 127 total aligned reads displayed.

TTTACGGTTATGATTTCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATTATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATA  >  NC_000913/1382725‑1382916

tttACGTTTATTATTTCCAGAACGGACTTTCCGTTTCGCTGGAATACCATTTTGACTGGCAGGATCACGACGAAGGCGACAGTTATAAATTCCATCATGc                                                                                              <  1:1102544/100‑1 (MQ=255)

tttACGGTTATGATTTCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGc                                                                                              >  2:3260209/1‑100 (MQ=255)

tttACGGCTATGATTTCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGc                                                                                              >  2:1822488/1‑100 (MQ=255)

   aCGGTTATGATTTCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAgg                                                                                           <  2:2816540/100‑1 (MQ=255)

    cGGTTATGATTTCCAGAACGGACTTTACGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGAAGAAGGCGACAGTGATAAATTCCATCATGCAGgt                                                                                          >  1:910588/1‑100 (MQ=255)

      gTTATGATTTCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGgtgt                                                                                        >  1:774709/1‑100 (MQ=255)

        tATGATTTCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCg                                                                                      <  2:774720/100‑1 (MQ=255)

         ctGATTTCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCgg                                                                                     <  1:759448/99‑1 (MQ=255)

          tGATTTCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGc                                                                                    >  2:716726/1‑100 (MQ=255)

            aTTTCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGt                                                                                  >  2:1530847/1‑100 (MQ=255)

             tttCCAGAACGGACTTTCCGTTTCGCTGGAATAGGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGCTGTCGGCGTa                                                                                 >  1:2289729/1‑100 (MQ=255)

             tttCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTa                                                                                 <  1:3179567/100‑1 (MQ=255)

              ttCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTaa                                                                                <  2:1218517/100‑1 (MQ=255)

               tCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCAGCATGCAGGTGTCGGCGTaaa                                                                               <  1:3383852/100‑1 (MQ=255)

                ccAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAAt                                                                              >  1:2930197/1‑100 (MQ=255)

                 ctgAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAAtt                                                                             <  1:2107051/98‑1 (MQ=255)

                 cAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAAtt                                                                             <  1:2330096/100‑1 (MQ=255)

                 cAGAACGGACTTTACGTTTCGCTGGAATACGAGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAAtt                                                                             >  2:2340532/1‑100 (MQ=255)

                   gAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCGGGTGTCGGCGTAAATTAc                                                                           <  2:2239799/100‑1 (MQ=255)

                   gAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTAc                                                                           >  1:2370873/1‑100 (MQ=255)

                     aCGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTc                                                                         >  1:2001136/1‑100 (MQ=255)

                     aCGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTc                                                                         >  1:2624458/1‑100 (MQ=255)

                       ggACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCAGCGTAAATTACTc                                                                         >  2:3446358/1‑98 (MQ=255)

                        gACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGtt                                                                      >  2:531113/1‑100 (MQ=255)

                          cTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCt                                                                    <  2:1447274/100‑1 (MQ=255)

                          cTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCt                                                                    >  2:3168763/1‑100 (MQ=255)

                            ttCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGa                                                                  >  2:2265131/1‑100 (MQ=255)

                              ccGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATa                                                                <  1:1425584/100‑1 (MQ=255)

                              ccGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTAATCGTTCTGATa                                                                >  1:822326/1‑100 (MQ=255)

                               cGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATaa                                                               >  1:1119768/1‑100 (MQ=255)

                                gTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAAt                                                              >  1:545942/1‑100 (MQ=255)

                                  ttCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATgg                                                            <  2:1806410/100‑1 (MQ=255)

                                  ttCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATg                                                             <  2:778518/99‑1 (MQ=255)

                                   tCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATggg                                                           <  2:287648/100‑1 (MQ=255)

                                   tCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATggg                                                           <  2:544191/100‑1 (MQ=255)

                                   tCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATggg                                                           <  1:584107/100‑1 (MQ=255)

                                    cGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGc                                                          >  1:2842467/1‑100 (MQ=255)

                                         gAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAAt                                                     <  2:1483899/100‑1 (MQ=255)

                                          aaTACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAAtt                                                    >  1:1848719/1‑100 (MQ=255)

                                            tACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGc                                                  >  2:1863792/1‑100 (MQ=255)

                                             aCGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGcc                                                 <  2:1391988/100‑1 (MQ=255)

                                              cgcgTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCg                                                <  2:1285813/100‑1 (MQ=255)

                                              cgcgTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCg                                                <  2:3476207/100‑1 (MQ=255)

                                               gcgTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCgg                                               <  2:295209/100‑1 (MQ=255)

                                               gcgTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCgg                                               <  2:1413088/100‑1 (MQ=255)

                                                cgTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGa                                              >  2:2789517/1‑100 (MQ=255)

                                                cgTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGa                                              >  2:1053311/1‑100 (MQ=255)

                                                cgTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGa                                              >  2:2095596/1‑100 (MQ=255)

                                                   ttGGGTGGCAGTATTACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAGTGGGCTAAATTGCCGGATgc                                           >  1:3122923/1‑100 (MQ=255)

                                                     gAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATgcgg                                         >  1:652295/1‑100 (MQ=255)

                                                     gAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATgcgg                                         <  1:3204473/100‑1 (MQ=255)

                                                     gAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATgcgg                                         >  1:3084853/1‑100 (MQ=255)

                                                      aGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATgcggc                                        <  2:3430725/100‑1 (MQ=255)

                                                       gTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATgcggcg                                       >  1:2650501/1‑100 (MQ=255)

                                                        tGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGgcgc                                      >  1:2077762/1‑100 (MQ=255)

                                                        tGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGgcgc                                      >  1:668172/1‑100 (MQ=255)

                                                         ggCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGcgcg                                     <  1:1081923/100‑1 (MQ=255)

                                                         ggCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGcgcg                                     >  1:1108036/1‑100 (MQ=255)

                                                          gCAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGa                                    <  2:2757556/100‑1 (MQ=255)

                                                           cAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAg                                   <  1:2191069/100‑1 (MQ=255)

                                                           cAGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAg                                   <  2:1347660/100‑1 (MQ=255)

                                                            aGGATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGt                                  <  2:1050778/100‑1 (MQ=255)

                                                             ggATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTa                                 >  2:2529078/1‑100 (MQ=255)

                                                             ggATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTa                                 >  2:2530149/1‑100 (MQ=255)

                                                             ggATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTa                                 >  1:673197/1‑100 (MQ=255)

                                                             ggATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTa                                 >  1:673168/1‑100 (MQ=255)

                                                             ggATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGACGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTa                                 >  1:2794918/1‑100 (MQ=255)

                                                              gATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTAc                                <  1:1425048/100‑1 (MQ=255)

                                                              gATCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTAc                                <  2:2537741/100‑1 (MQ=255)

                                                                tCACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAGATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACtt                              <  1:1296556/100‑1 (MQ=255)

                                                                tCACGACGAAGGCGACAGGGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACtt                              >  1:2770984/1‑100 (MQ=255)

                                                                 cACGACGAAGGCGACAGTGATAAATTCCATCATGCGGGTGTCGGCGTAAATTAATCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACtt                              >  1:3075911/1‑99 (MQ=255)

                                                                 cACGACGAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACttt                             >  1:521503/1‑100 (MQ=255)

                                                                  acgacgAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTa                            >  2:1755393/1‑100 (MQ=255)

                                                                  acgacgAAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTa                            <  2:2164777/100‑1 (MQ=255)

                                                                   cgacgaAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTAt                           <  1:70766/100‑1 (MQ=255)

                                                                   cgacgaAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTAt                           >  1:1380516/1‑100 (MQ=255)

                                                                    gacgaAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACttatcc                          <  1:3318586/100‑5 (MQ=255)

                                                                    gacgaAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATc                          >  2:2592521/1‑100 (MQ=255)

                                                                    gacgaAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATc                          >  1:1320914/1‑100 (MQ=255)

                                                                     acgaAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATcc                         <  2:2077793/100‑1 (MQ=255)

                                                                      cgaAGGCGACAGTGATAAATTCCATCATGCAGTTGTCGGCGTAAATTACTAGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCg                        <  2:1580008/100‑1 (MQ=255)

                                                                      cgaAGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATcc                         <  1:2789473/99‑1 (MQ=255)

                                                                        aaGGCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGAt                      <  2:763473/100‑1 (MQ=255)

                                                                           gCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCta                   <  1:504210/100‑1 (MQ=255)

                                                                           gCGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCta                   <  1:2530115/100‑1 (MQ=255)

                                                                            cGACAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGACGGATGCGGCGCGAGTCGTTTATTCGATCta                   >  1:2832962/1‑99 (MQ=255)

                                                                               cAGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATaaa               >  1:1166099/1‑100 (MQ=255)

                                                                                aGTGATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAAt              <  2:521509/100‑1 (MQ=255)

                                                                                   gATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTa           >  1:3086024/1‑100 (MQ=255)

                                                                                   gATAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTa           >  2:163864/1‑100 (MQ=255)

                                                                                     tAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAgg         >  2:2330280/1‑100 (MQ=255)

                                                                                     tAAATTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGAGCGAGTACTTTATCCGATCTATAAATGTAgg         <  1:1814880/100‑1 (MQ=255)

                                                                                       aaTTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGcc       >  1:2781616/1‑100 (MQ=255)

                                                                                       aaTTCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGcc       <  2:1577417/100‑1 (MQ=255)

                                                                                         ttCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCgg     <  2:1122718/100‑1 (MQ=255)

                                                                                          tCCATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGa    <  1:636677/100‑1 (MQ=255)

                                                                                           ccATCATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGAt   >  2:364000/1‑100 (MQ=255)

                                                                                            catcatGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATa  <  1:426981/100‑1 (MQ=255)

                                                                                              ttATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATa  <  1:2620139/98‑1 (MQ=255)

TTTACGGTTATGATTTCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATTATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATA  >  NC_000913/1382725‑1382916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`