Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 416,389 (C)5→4 100% coding (564/1203 nt) sbcD ← exonuclease, dsDNA, ATP‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913416,3850C.57.4% 41.4 / 292.7 136coding (568/1203 nt)sbcDexonuclease, dsDNA, ATP‑dependent
Reads supporting (aligned to +/- strand):  ref base C (23/34);  new base . (32/46);  total (56/80)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 143 total aligned reads displayed.

ATGCCCGAGCGCGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATCGGTAA  >  NC_000913/416287‑416483
                                                                                                  |                                                                                                  
atGCCCGAGCGCGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCAGAAACGCGGCCAGCGTGCCAATAGAAATGTCACGCACGGCGTCACTTTTACTGGcc                                                                                                   <  1:445528/100‑1 (MQ=255)
 tGCCCGAGCGCGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGTGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGccc                                                                                                  >  1:2172874/1‑100 (MQ=255)
  gCCCGAGCGCGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGcccc                                                                                                 >  2:629487/1‑100 (MQ=255)
      gAGCGCGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGccccacgg                                                                                             >  2:2560508/1‑96 (MQ=255)
        gcgcGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGt                                                                                           <  1:713233/100‑1 (MQ=255)
        gcgcGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGt                                                                                           >  1:1874144/1‑100 (MQ=255)
         cgcgATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCg                                                                                         <  1:1152242/100‑1 (MQ=255)
          gcgATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCg                                                                                         <  1:1431733/100‑1 (MQ=255)
           cgATGTAGTCGGCTGGTGGAAAGTTTTGTGCGGGAAACGCGTCCAGCGTGCGAATATAAATGTCACGCAGGGTGTCACTTTTACTGAccccacgg                                                                                             >  1:2826825/1‑91 (MQ=255)
             aTGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTaa                                                                                     <  1:1268935/100‑1 (MQ=255)
               gTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAAt                                                                                   <  1:1985854/100‑1 (MQ=255)
                tAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAAtn                                                                                  <  2:1268112/100‑2 (MQ=255)
                tAGTCGGCTGGTGGAAAGGTTTGTGCCGGAATCGCGTCCATCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCGCACGGTCGGTAAATg                                                                                  >  1:1975504/1‑100 (MQ=255)
                 aGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATg                                                                                  <  2:1137544/100‑1 (MQ=255)
                  ggcGGCTGGTGGAAAGTTTTGTGCGGGAAACGCGTCCAGCGTGCCAATATAAATGGCACGTAAGGCGTCACTTTTACTCGCCCCGCGGTCGTTAAATg                                                                                  <  1:3240291/96‑1 (MQ=255)
                    cGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTcc                                                                               >  2:3133497/1‑100 (MQ=255)
                    cGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTccc                                                                              >  1:1794208/1‑100 (MQ=255)
                    cGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTccc                                                                              >  1:734982/1‑100 (MQ=255)
                    cGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTccc                                                                              <  1:2558303/100‑1 (MQ=255)
                     ggCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTccc                                                                              <  2:2841428/100‑1 (MQ=255)
                       cTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTg                                                                           <  2:1740115/100‑1 (MQ=255)
                         ggtggAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTgg                                                                          >  1:323449/1‑100 (MQ=255)
                          gtggAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGc                                                                         >  1:453243/1‑100 (MQ=255)
                          gtggAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCg                                                                        <  2:1418723/100‑1 (MQ=255)
                            ggAGAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGc                                                                         >  1:1106709/1‑97 (MQ=255)
                            ggAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCga                                                                       >  1:2606312/1‑100 (MQ=255)
                            ggAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCgat                                                                      >  2:2502362/1‑100 (MQ=255)
                            ggAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCgat                                                                      >  2:3080622/1‑100 (MQ=255)
                             gAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCgat                                                                      <  2:1373026/100‑1 (MQ=255)
                             gAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCgatg                                                                     <  1:319865/100‑1 (MQ=255)
                             gAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCgatg                                                                     >  2:946771/1‑100 (MQ=255)
                                 gTTTTGTGCCGGAAACGCGTCCAGCGTGCTAATATAAATGTCACGCACGGCGTCACTTTTACTGGCGCCACGGTCGTTAAATGTCCCGTGGCGATGATgg                                                                 <  1:2038357/100‑1 (MQ=255)
                                 gTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATGTAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGatgatg                                                                  >  1:1359042/1‑100 (MQ=255)
                                 gTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGGACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTTGCGATGATgg                                                                 >  1:607687/1‑100 (MQ=255)
                                  ttttGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATgg                                                                 <  2:900971/100‑1 (MQ=255)
                                  ttttGTGCCGGAAACGCGGCCAGCGTGCCAATATAAATGTCACGCACGGCGTGACTTTTACTGGCTCCCACGGTCGTTAAATGTCCCGTGGCGATGATgg                                                                 <  1:357876/100‑1 (MQ=255)
                                   tttGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATggg                                                                <  1:2204035/100‑1 (MQ=255)
                                   tttGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGc                                                               <  1:2749027/100‑1 (MQ=255)
                                    ttGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCa                                                              <  2:763527/100‑1 (MQ=255)
                                      gtgCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCaga                                                            <  1:946768/100‑1 (MQ=255)
                                        gCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCagag                                                           >  2:561903/1‑100 (MQ=255)
                                        gCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAgg                                                          >  1:3382324/1‑100 (MQ=255)
                                         ccGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAgg                                                          >  1:1753148/1‑100 (MQ=255)
                                         ccGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGc                                                         >  1:3342971/1‑100 (MQ=255)
                                          cGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGc                                                         <  1:297296/100‑1 (MQ=255)
                                          cGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCt                                                        >  1:1352048/1‑100 (MQ=255)
                                           ggAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCt                                                        <  1:118488/100‑1 (MQ=255)
                                           ggAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCt                                                        <  2:2382949/100‑1 (MQ=255)
                                             aaaCGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGAt                                                     <  2:797286/100‑1 (MQ=255)
                                              aaCGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATc                                                    <  1:1951470/100‑1 (MQ=255)
                                               aCGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcg                                                   <  2:202344/100‑1 (MQ=255)
                                               aCGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcg                                                   <  2:2103954/100‑1 (MQ=255)
                                                cgcgTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcg                                                   <  2:594366/100‑1 (MQ=255)
                                                cgcgTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcgc                                                  >  2:361450/1‑100 (MQ=255)
                                                 gcgTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcgcc                                                 <  1:1283029/100‑1 (MQ=255)
                                                  cgTCCATCGTGCCAATATAAATGTCACGCACTGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcg                                                   <  1:2862246/98‑1 (MQ=255)
                                                  cgTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcgcc                                                 >  2:1329356/1‑100 (MQ=255)
                                                      cAGCGTTCCAATCTAAATGTCACGCACGGCGCCCCTTTTTCTGGCCGAACCGTCGTCACACCTCCCGTGCCGGTGCTGGACAGAGCCACATcgccgc                                               >  1:2130551/1‑97 (MQ=255)
                                                      cAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCgcgc                                             >  2:775216/1‑100 (MQ=255)
                                                       aGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAg                                           <  2:863724/100‑1 (MQ=255)
                                                            gCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGc                                      >  1:701374/1‑100 (MQ=255)
                                                              cAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGACGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCa                                     <  1:2028828/100‑1 (MQ=255)
                                                               aaTATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAg                                    <  2:1107247/100‑1 (MQ=255)
                                                               aaTATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAgg                                   <  2:306763/100‑1 (MQ=255)
                                                                     aaTGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCg                              >  2:2339798/1‑100 (MQ=255)
                                                                     aaTGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCgg                             <  2:974708/100‑1 (MQ=255)
                                                                     aaTGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCgg                             >  2:2023945/1‑100 (MQ=255)
                                                                     aaTGTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCgg                             <  2:1545458/100‑1 (MQ=255)
                                                                        gTCACGCACGGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCAt                          >  1:52172/1‑100 (MQ=255)
                                                                          cacgcacgGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATa                         >  2:2808124/1‑100 (MQ=255)
                                                                          cacgcacgGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAg                        <  1:1627180/100‑1 (MQ=255)
                                                                           aggcacgGCGTCAATTTTACTGGCCCCCACGCTCGTTAAATGGCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAg                        >  2:2289851/3‑100 (MQ=255)
                                                                           acgcacgGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAg                        <  1:629484/100‑1 (MQ=255)
                                                                           acgcacgGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAg                        >  2:465669/1‑100 (MQ=255)
                                                                            cgcacgGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAgtg                      >  1:2277262/1‑100 (MQ=255)
                                                                              cacgGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAgtgt                     <  1:932753/100‑1 (MQ=255)
                                                                               acgGCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGtgttg                   <  1:176399/100‑1 (MQ=255)
                                                                                 ggCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGtgttgt                  <  1:2513270/100‑1 (MQ=255)
                                                                                  gCGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGttgttg                <  2:1194508/100‑1 (MQ=255)
                                                                                   cctCACTTTTACTGGCCCCACGGTCGTTAAAGGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTgttgttn                <  1:691126/97‑2 (MQ=255)
                                                                                   cGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGttgttg                <  1:2183714/100‑1 (MQ=255)
                                                                                   cGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGttgttg                <  1:766749/100‑1 (MQ=255)
                                                                                   cGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGAGGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGttggtg                <  1:780630/100‑1 (MQ=255)
                                                                                   cGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTgg               <  1:1600088/100‑1 (MQ=255)
                                                                                   cGTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTgg               >  1:1867377/1‑100 (MQ=255)
                                                                                    gTCACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGt              <  2:734985/100‑1 (MQ=255)
                                                                                      cACTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGta             <  2:3034028/99‑1 (MQ=255)
                                                                                       aCTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaat           >  1:3113052/1‑100 (MQ=255)
                                                                                       aCTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaat           <  1:2433943/100‑1 (MQ=255)
                                                                                        cTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaat           <  2:1600731/100‑1 (MQ=255)
                                                                                        cTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaat           >  1:1998415/1‑100 (MQ=255)
                                                                                        cTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATAGGCAGAGTGTTGTTGGtaat           >  1:311043/1‑100 (MQ=255)
                                                                                        cTTTTACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaat           >  2:2405033/1‑99 (MQ=255)
                                                                                          tttACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaataa         <  1:983930/100‑1 (MQ=255)
                                                                                          tttACTGGCCCGACGGTCGTTAAATGTCCCGTGGCGATGGTGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaa            <  1:3046976/96‑1 (MQ=255)
                                                                                           ttACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATc       <  1:1144802/100‑1 (MQ=255)
                                                                                            tACTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATCg      <  2:1862790/100‑1 (MQ=255)
                                                                                             aCTGGCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATCgg     <  2:3113079/100‑1 (MQ=255)
                                                                                               tGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATCgg     <  1:1186670/99‑1 (MQ=255)
                                                                                                 gCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATCGGTaa  <  2:2491410/100‑1 (MQ=255)
                                                                                                  |                                                                                                  
ATGCCCGAGCGCGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATCGGTAA  >  NC_000913/416287‑416483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: