Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 416,389 | (C)5→4 | 100% | coding (564/1203 nt) | sbcD ← | exonuclease, dsDNA, ATP‑dependent |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 416,385 | 0 | C | . | 57.4% | 41.4 / 292.7 | 136 | coding (568/1203 nt) | sbcD | exonuclease, dsDNA, ATP‑dependent |
Reads supporting (aligned to +/- strand): ref base C (23/34); new base . (32/46); total (56/80) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 143 total aligned reads displayed.
ATGCCCGAGCGCGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATCGGTAA > NC_000913/416287‑416483 | atGCCCGAGCGCGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCAGAAACGCGGCCAGCGTGCCAATAGAAATGTCACGCACGGCGTCACTTTTACTGGcc < 1:445528/100‑1 (MQ=255) tGCCCGAGCGCGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGTGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGccc > 1:2172874/1‑100 (MQ=255) gCCCGAGCGCGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGcccc > 2:629487/1‑100 (MQ=255) gAGCGCGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGccccacgg > 2:2560508/1‑96 (MQ=255) gcgcGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGt < 1:713233/100‑1 (MQ=255) gcgcGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGt > 1:1874144/1‑100 (MQ=255) cgcgATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCg < 1:1152242/100‑1 (MQ=255) gcgATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCg < 1:1431733/100‑1 (MQ=255) cgATGTAGTCGGCTGGTGGAAAGTTTTGTGCGGGAAACGCGTCCAGCGTGCGAATATAAATGTCACGCAGGGTGTCACTTTTACTGAccccacgg > 1:2826825/1‑91 (MQ=255) aTGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTaa < 1:1268935/100‑1 (MQ=255) gTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAAt < 1:1985854/100‑1 (MQ=255) tAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAAtn < 2:1268112/100‑2 (MQ=255) tAGTCGGCTGGTGGAAAGGTTTGTGCCGGAATCGCGTCCATCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCGCACGGTCGGTAAATg > 1:1975504/1‑100 (MQ=255) aGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATg < 2:1137544/100‑1 (MQ=255) ggcGGCTGGTGGAAAGTTTTGTGCGGGAAACGCGTCCAGCGTGCCAATATAAATGGCACGTAAGGCGTCACTTTTACTCG‑CCCCGCGGTCGTTAAATg < 1:3240291/96‑1 (MQ=255) cGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTcc > 2:3133497/1‑100 (MQ=255) cGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTccc > 1:1794208/1‑100 (MQ=255) cGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTccc > 1:734982/1‑100 (MQ=255) cGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTccc < 1:2558303/100‑1 (MQ=255) ggCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTccc < 2:2841428/100‑1 (MQ=255) cTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTg < 2:1740115/100‑1 (MQ=255) ggtggAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTgg > 1:323449/1‑100 (MQ=255) gtggAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGc > 1:453243/1‑100 (MQ=255) gtggAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCg < 2:1418723/100‑1 (MQ=255) ggAGAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGc > 1:1106709/1‑97 (MQ=255) ggAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCga > 1:2606312/1‑100 (MQ=255) ggAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCgat > 2:2502362/1‑100 (MQ=255) ggAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCgat > 2:3080622/1‑100 (MQ=255) gAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCgat < 2:1373026/100‑1 (MQ=255) gAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCgatg < 1:319865/100‑1 (MQ=255) gAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCgatg > 2:946771/1‑100 (MQ=255) gTTTTGTGCCGGAAACGCGTCCAGCGTGCTAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CGCCACGGTCGTTAAATGTCCCGTGGCGATGATgg < 1:2038357/100‑1 (MQ=255) gTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATGTAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGatgatg > 1:1359042/1‑100 (MQ=255) gTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGGACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTTGCGATGATgg > 1:607687/1‑100 (MQ=255) ttttGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATgg < 2:900971/100‑1 (MQ=255) ttttGTGCCGGAAACGCGGCCAGCGTGCCAATATAAATGTCACGCACGGCGTGACTTTTACTGGCTCCCACGGTCGTTAAATGTCCCGTGGCGATGATgg < 1:357876/100‑1 (MQ=255) tttGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATggg < 1:2204035/100‑1 (MQ=255) tttGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGc < 1:2749027/100‑1 (MQ=255) ttGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCa < 2:763527/100‑1 (MQ=255) gtgCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCaga < 1:946768/100‑1 (MQ=255) gCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCagag > 2:561903/1‑100 (MQ=255) gCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAgg > 1:3382324/1‑100 (MQ=255) ccGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAgg > 1:1753148/1‑100 (MQ=255) ccGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGc > 1:3342971/1‑100 (MQ=255) cGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGc < 1:297296/100‑1 (MQ=255) cGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCt > 1:1352048/1‑100 (MQ=255) ggAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCt < 1:118488/100‑1 (MQ=255) ggAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCt < 2:2382949/100‑1 (MQ=255) aaaCGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGAt < 2:797286/100‑1 (MQ=255) aaCGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATc < 1:1951470/100‑1 (MQ=255) aCGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcg < 2:202344/100‑1 (MQ=255) aCGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcg < 2:2103954/100‑1 (MQ=255) cgcgTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcg < 2:594366/100‑1 (MQ=255) cgcgTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcgc > 2:361450/1‑100 (MQ=255) gcgTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcgcc < 1:1283029/100‑1 (MQ=255) cgTCCATCGTGCCAATATAAATGTCACGCACTGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcg < 1:2862246/98‑1 (MQ=255) cgTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATcgcc > 2:1329356/1‑100 (MQ=255) cAGCGTTCCAATCTAAATGTCACGCACGGCGCCCCTTTTTCTGG‑CCGAACCGTCGTCACACCTCCCGTGCCGGTGCTGGACAGAGCCACATcgccgc > 1:2130551/1‑97 (MQ=255) cAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCgcgc > 2:775216/1‑100 (MQ=255) aGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAg < 2:863724/100‑1 (MQ=255) gCCAATATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGc > 1:701374/1‑100 (MQ=255) cAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGACGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCa < 1:2028828/100‑1 (MQ=255) aaTATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAg < 2:1107247/100‑1 (MQ=255) aaTATAAATGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAgg < 2:306763/100‑1 (MQ=255) aaTGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCg > 2:2339798/1‑100 (MQ=255) aaTGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCgg < 2:974708/100‑1 (MQ=255) aaTGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCgg > 2:2023945/1‑100 (MQ=255) aaTGTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCgg < 2:1545458/100‑1 (MQ=255) gTCACGCACGGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCAt > 1:52172/1‑100 (MQ=255) cacgcacgGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATa > 2:2808124/1‑100 (MQ=255) cacgcacgGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAg < 1:1627180/100‑1 (MQ=255) aggcacgGCGTCAATTTTACTGGCCCCCACGCTCGTTAAATGGCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAg > 2:2289851/3‑100 (MQ=255) acgcacgGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAg < 1:629484/100‑1 (MQ=255) acgcacgGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAg > 2:465669/1‑100 (MQ=255) cgcacgGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAgtg > 1:2277262/1‑100 (MQ=255) cacgGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAgtgt < 1:932753/100‑1 (MQ=255) acgGCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGtgttg < 1:176399/100‑1 (MQ=255) ggCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGtgttgt < 1:2513270/100‑1 (MQ=255) gCGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGttgttg < 2:1194508/100‑1 (MQ=255) cctCACTTTTACTGG‑CCCCACGGTCGTTAAAGGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTgttgttn < 1:691126/97‑2 (MQ=255) cGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGttgttg < 1:2183714/100‑1 (MQ=255) cGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGttgttg < 1:766749/100‑1 (MQ=255) cGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGAGGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGttggtg < 1:780630/100‑1 (MQ=255) cGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTgg < 1:1600088/100‑1 (MQ=255) cGTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTgg > 1:1867377/1‑100 (MQ=255) gTCACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGt < 2:734985/100‑1 (MQ=255) cACTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGta < 2:3034028/99‑1 (MQ=255) aCTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaat > 1:3113052/1‑100 (MQ=255) aCTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaat < 1:2433943/100‑1 (MQ=255) cTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaat < 2:1600731/100‑1 (MQ=255) cTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaat > 1:1998415/1‑100 (MQ=255) cTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATAGGCAGAGTGTTGTTGGtaat > 1:311043/1‑100 (MQ=255) cTTTTACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaat > 2:2405033/1‑99 (MQ=255) tttACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaataa < 1:983930/100‑1 (MQ=255) tttACTGG‑CCCGACGGTCGTTAAATGTCCCGTGGCGATGGTGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGtaa < 1:3046976/96‑1 (MQ=255) ttACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATc < 1:1144802/100‑1 (MQ=255) tACTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATCg < 2:1862790/100‑1 (MQ=255) aCTGG‑CCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATCgg < 2:3113079/100‑1 (MQ=255) tGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATCgg < 1:1186670/99‑1 (MQ=255) gCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATCGGTaa < 2:2491410/100‑1 (MQ=255) | ATGCCCGAGCGCGATGTAGTCGGCTGGTGGAAAGTTTTGTGCCGGAAACGCGTCCAGCGTGCCAATATAAATGTCACGCACGGCGTCACTTTTACTGGCCCCCACGGTCGTTAAATGTCCCGTGGCGATGATGGGCAGAGGCTGATCGCCGCGCAGTTTGCAGGCATCGGCATAGTGTTGTTGGTAATAATCGGTAA > NC_000913/416287‑416483 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |