| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 107,553 | (T)9→8 | 100% | intergenic (+79/‑152) | lpxC → / → secM | UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase/regulator of secA translation |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 107,545 | 0 | T | . | 62.3% | 98.3 / 217.5 | 122 | intergenic (+71/‑160) | lpxC/secM | UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase/regulator of secA translation |
| Reads supporting (aligned to +/- strand): ref base T (23/23); new base . (33/43); total (56/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 134 total aligned reads displayed.
TCAAAGCGCCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCTGTGGACTG > NC_000913/107446‑107642 | tCAAAGCGCCTTCAGCTGTAATGGCATAACGACATTTATACTGTCGTATCAAATTAGACTGACAAATCTGACAATCTCTCCGGCCACGTGAACCAGTCG‑t > 1:323598/1‑100 (MQ=255) aaaGCGCCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑ttt > 1:2429174/1‑100 (MQ=255) aaaGCGCCTTCAGCTGTACTGGCATAACGACATTTATACTGACGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑ttt > 1:1851336/1‑100 (MQ=255) gcgcCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑tttttt > 2:252283/1‑100 (MQ=255) cgcCTTCATCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑ttttttt < 2:114106/100‑1 (MQ=255) cgcCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑ttttttt < 2:1759927/100‑1 (MQ=255) ccTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑ttttttttg < 1:2311274/100‑2 (MQ=255) ccTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑ttttttttg < 1:2421071/100‑2 (MQ=255) cTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTg > 2:3007639/1‑100 (MQ=255) cTTCAGCTGTACGGGCATAACGACATGTATACTGTCGTATAAAATTCGACTGGCAAATCTGTCACTCTCTCCGGCCAGGTGAACCAGTCT‑TTTTTTTTTg < 1:1165108/100‑1 (MQ=255) tGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTta < 2:242452/100‑1 (MQ=255) tGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTtat < 2:630906/100‑1 (MQ=255) gTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTtata < 1:919222/100‑1 (MQ=255) tACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTtata < 2:1582337/100‑1 (MQ=255) aCTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAag > 1:596221/1‑100 (MQ=255) aCTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAag > 1:1810456/1‑100 (MQ=255) cTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAag < 1:96249/100‑1 (MQ=255) cTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTT‑AATTTTATaa > 1:1550406/1‑98 (MQ=255) cTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATaata > 1:1259706/1‑98 (MQ=255) cTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAaga < 1:1428166/100‑1 (MQ=255) ggCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAagag < 1:621074/100‑1 (MQ=255) ggCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGc < 2:596224/100‑1 (MQ=255) ggCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGc < 2:596303/100‑1 (MQ=255) ggCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGc > 2:2642726/1‑100 (MQ=255) ggCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGc < 2:1419452/100‑1 (MQ=255) ggCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCCCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGc < 1:734572/100‑1 (MQ=255) ggCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAACCTGGCACTCTCTCAGGCCAGGTGAACCCGTCG‑‑TTCTCTTTGTATTTtatagg > 1:2949472/1‑95 (MQ=255) cATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTTTATTTTTTTAGAGc > 1:3146739/1‑99 (MQ=255) tAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTT‑ATTTTTATAACAGCtata > 1:1961501/1‑100 (MQ=255) tAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCtata > 2:2555221/1‑100 (MQ=255) tAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCtata < 2:1917629/100‑1 (MQ=255) aaCGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATaa > 1:372969/1‑100 (MQ=255) aCGACATTTATACTGTCGAATAAAATTCGAATGGCAAATCTGGCACTATCTCCGGCCAGGTGAACCAGTCG‑TCTTTTTTT‑AATTTTTTAagaac > 1:491444/1‑92 (MQ=255) ccgatcttATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATaaaa < 2:2024161/94‑1 (MQ=255) cGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATaaaa < 2:2052620/100‑1 (MQ=255) aCATTTATACTGACGTATAAAATTCGACTTGCAAATTTGGTACTCTCTCCGGCTAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCtata < 1:452137/96‑1 (MQ=255) naTTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAAc > 2:3362833/2‑100 (MQ=255) tataCTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATaaaaagatcgg > 1:2024147/1‑94 (MQ=255) tataCTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTg > 2:1250192/1‑100 (MQ=255) ataCTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGc < 2:178922/100‑1 (MQ=255) taCTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCg < 1:3283495/100‑1 (MQ=255) taCTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCg < 2:2157424/100‑1 (MQ=255) tCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACg < 1:252282/100‑1 (MQ=255) cGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTT‑AATTTTATAAGAGCTATAAAAAACGGTGCGAACGCt > 1:3258327/1‑100 (MQ=255) ataAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGaa < 2:2898980/94‑1 (MQ=255) ataAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGtt < 2:1408754/100‑1 (MQ=255) ataAAATTCGACTGGCAAATCTGGCACTCGCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTTATTTTTATAAGAGCTATAGAAAACGTTGCGAACGCTGt > 1:1638295/1‑100 (MQ=255) taAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGtt > 1:2935/1‑100 (MQ=255) aaaaTTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGttt > 1:3359783/1‑100 (MQ=255) aaaaTTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGtttt < 1:2629699/100‑1 (MQ=255) aaaTTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATCAGAGCTATAAAAAACGGTGCGAACGCTGtttt > 1:3177330/1‑99 (MQ=255) aaTTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCt < 1:284601/100‑1 (MQ=255) ttCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTa < 1:585151/100‑1 (MQ=255) cGACTGGTTCATCTGTCTCTATCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAg < 1:1929294/100‑1 (MQ=255) cGACTGGCAAATCTTGTACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTaa < 1:3123295/100‑1 (MQ=255) cGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAg < 2:3116242/100‑1 (MQ=255) gACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGc < 2:573482/100‑1 (MQ=255) gACTGGCAAATCTGGCAATCTCTCCGGCCAGGTAAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCCCTAAAAAGAGGTGCGGACGCTGTTTTCTTAAGc > 1:3092535/1‑100 (MQ=255) cTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCAc > 2:1631479/1‑100 (MQ=255) tGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACt < 1:566994/100‑1 (MQ=255) ggCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACt > 2:2401279/1‑100 (MQ=255) ggCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACtt > 2:3369900/1‑100 (MQ=255) ggCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACtt > 1:1204523/1‑100 (MQ=255) ggCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACtt > 2:2320454/1‑100 (MQ=255) ggCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACtt > 2:1266662/1‑100 (MQ=255) ggCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACtt > 2:110500/1‑100 (MQ=255) aaaTCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTc < 2:115097/100‑1 (MQ=255) tCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCg < 2:126792/100‑1 (MQ=255) tCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCg < 1:457530/100‑1 (MQ=255) tCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGc < 2:2302511/100‑1 (MQ=255) tCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGc < 2:3071150/100‑1 (MQ=255) tCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGc < 1:2349408/100‑1 (MQ=255) tCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGc < 1:336308/100‑1 (MQ=255) cTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGc < 2:707673/100‑1 (MQ=255) cTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGc < 1:599984/100‑1 (MQ=255) ggCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGcac > 2:2451630/1‑100 (MQ=255) ggCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGcac > 2:2584294/1‑100 (MQ=255) gCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTT‑TTTTTTTTAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGca > 1:748541/1‑97 (MQ=255) gCACTCTCTCCGGCCAGGTGAAACCGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGcac < 1:892037/99‑1 (MQ=255) cACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCATAAc > 1:2114700/1‑100 (MQ=255) cACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAAc < 1:2314086/100‑1 (MQ=255) cACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAAc < 2:2812359/100‑1 (MQ=255) cACTCTCTCCGGCCAGGTGAACCAGCCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGc < 2:402756/96‑1 (MQ=255) tctctcCGGCCAGGTGAACCAGTCGTTTTTTTTTTTAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACt < 1:3197712/100‑1 (MQ=255) ctctcCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTa > 2:1576870/1‑100 (MQ=255) ctctcCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATCTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTAt > 2:2382764/1‑100 (MQ=255) tcCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCt > 2:1964853/1‑100 (MQ=255) ccGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTc > 1:3255474/1‑100 (MQ=255) gCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCAt < 1:2693107/100‑1 (MQ=255) ccAGGTGCACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCAtt < 2:2447848/100‑1 (MQ=255) ccAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCAtt < 2:1460921/100‑1 (MQ=255) cAGGTGAACCAGTCG‑TTTTTTTT‑‑AATTTTATAAAACCTAAAAAAGACGAAGCGAACGCGATTTTCCTAAACACTTTACCGCACAACTTATCATCATTTGt > 1:1764328/1‑100 (MQ=255) cAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCg < 1:2555201/100‑1 (MQ=255) aGGTGCACCAGTCG‑TTTTTTTTTGAAGTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCAtt < 1:640934/98‑1 (MQ=255) aGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCg < 1:1871819/100‑1 (MQ=255) aCCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCtgtg > 2:2948456/1‑100 (MQ=255) aCCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCtgtg < 1:2743303/100‑1 (MQ=255) ccAGTCG‑TTTTTTTTT‑TTTTTTTTTATAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCtgt > 1:1992338/1‑98 (MQ=255) cAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCTGTgg < 1:2928645/100‑1 (MQ=255) cAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCTGTGGa < 1:2434331/100‑1 (MQ=255) | TCAAAGCGCCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCTGTGGACTG > NC_000913/107446‑107642 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |