| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,170,338 | (A)6→5 | 100% | coding (37/963 nt) | ldtC ← | L,D‑transpeptidase linking Lpp to murein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,170,333 | 0 | A | . | 56.5% | 24.9 / 224.1 | 108 | coding (42/963 nt) | ldtC | L,D‑transpeptidase linking Lpp to murein |
| Reads supporting (aligned to +/- strand): ref base A (24/22); new base . (23/38); total (47/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.94e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
ATGAAATTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAATTATGG > NC_000913/1170234‑1170431 | aTGAAATTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTa < 2:1295969/100‑1 (MQ=255) gAAATTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaa < 1:1363749/100‑1 (MQ=255) gAAATTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaa > 1:2389396/1‑100 (MQ=255) gAAATTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaa > 2:2343666/1‑100 (MQ=255) aaaTTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaaa > 2:2918906/1‑100 (MQ=255) ttGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaaaacgt < 1:1800545/100‑4 (MQ=255) ttGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACg < 2:3363763/100‑1 (MQ=255) ttGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACg > 1:2884165/1‑100 (MQ=255) tGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaaaacgtt < 1:1171762/100‑5 (MQ=255) gTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGtt > 2:1610801/1‑100 (MQ=255) ttttCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTa < 1:2680770/100‑1 (MQ=255) ttCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAGAACGTTAGcc < 2:689896/100‑1 (MQ=255) ntCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGc > 1:309674/2‑100 (MQ=255) tCGCCAACCAGACGACGGCCCGCTGGCGGCATCGGCCAGGTGTGGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGc < 1:377678/99‑1 (MQ=255) ccAACCAGACGACTGCCCACTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGc < 1:3250968/100‑1 (MQ=255) cAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCga > 1:2886545/1‑100 (MQ=255) aaCCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCga > 1:1923971/1‑100 (MQ=255) aaCCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCgag > 1:1692413/1‑100 (MQ=255) aaCCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCgag > 1:508384/1‑100 (MQ=255) cAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGaaa < 1:1313582/100‑1 (MQ=255) aGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGaaaa < 1:1555682/100‑1 (MQ=255) gacgacTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGaaaa > 1:1744842/1‑100 (MQ=255) cgacTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCATGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAAc > 1:813650/1‑100 (MQ=255) ccTGGCCGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAAcgc > 1:2043316/2‑100 (MQ=255) ccTGGCCGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGAGCCACGGCAGCGGGGAACGT‑AAAAACGTTAGTCAGCGTGAAAAAcgcg > 1:2231017/2‑100 (MQ=255) acTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcgcg < 2:2343996/100‑1 (MQ=255) cTGGCCGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAAcgcg > 2:2168208/1‑100 (MQ=255) tggccGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGCACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGt > 2:2607009/4‑100 (MQ=255) gCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGtt > 2:1164231/1‑100 (MQ=255) gCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGtt > 2:2083092/1‑100 (MQ=255) gCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcgc > 1:3258752/1‑96 (MQ=255) cccGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGtttt < 2:1975590/100‑1 (MQ=255) gCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGat < 2:2325270/100‑1 (MQ=255) cTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGat < 1:2441386/100‑1 (MQ=255) cTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGat < 2:1939808/100‑1 (MQ=255) ggcggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatca < 1:646184/100‑1 (MQ=255) ggcggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatcat > 1:3177736/1‑100 (MQ=255) gcggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatcatc < 2:551956/100‑1 (MQ=255) gcggcAGCGGCCAGGTGTTGGCATTTGACGATAGCTCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatc < 1:3206330/98‑1 (MQ=255) gcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCAc > 1:2664030/1‑100 (MQ=255) cAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAATGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCAcc < 2:2389413/100‑1 (MQ=255) aGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCaa > 1:3250820/1‑100 (MQ=255) aGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTAAAAAAAAAAAAAAAACGCGTTTTGATCATCACCa < 1:1900675/99‑1 (MQ=255) gCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCGGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCaa < 2:2699125/100‑1 (MQ=255) cGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCaaa < 2:1557557/100‑1 (MQ=255) cAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATc > 1:565007/1‑100 (MQ=255) cAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATc < 1:1907124/99‑1 (MQ=255) aGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAATACGTAAAAAAAAAAAAAAAACGCGTTTTGATCATCACCAAAAATCCa < 1:44910/100‑1 (MQ=255) aGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCa < 2:48037/100‑1 (MQ=255) aGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCa < 1:2184783/100‑1 (MQ=255) gtgtTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCata < 2:2094080/100‑1 (MQ=255) tgtTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCata < 2:1434902/100‑1 (MQ=255) tgtTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCataa > 2:1425938/1‑100 (MQ=255) gtTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCataat > 1:1196894/1‑100 (MQ=255) gtTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGGTTTGATCATCACCAAAAATCCataat > 1:1049297/1‑100 (MQ=255) ttGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCataat < 1:149227/100‑1 (MQ=255) ttGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCataata > 2:1961325/1‑100 (MQ=255) tGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCAtaataa > 2:626020/1‑100 (MQ=255) ggCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCAtaataa > 1:849572/1‑100 (MQ=255) gCTTTTGCCGGTAGCGCCAGCGCCACGGCAACGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATaataaat < 1:2903874/100‑1 (MQ=255) cTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATaataaata < 1:900064/100‑1 (MQ=255) cTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATaataaata < 2:1147463/100‑1 (MQ=255) cTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATaataaata > 2:1865714/1‑100 (MQ=255) cTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATaataaata > 1:2512435/1‑100 (MQ=255) cTTTTGCCAGTACGGCCAGTCCCACTGCATCGGCCAACGTCAAAAACGTTAGCCAGCGAGAAAGACTCGTTTTGATCATCACCAAAAATCCATaataaa < 1:780092/99‑1 (MQ=255) ttttGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCAAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATaataaata < 1:2439043/99‑1 (MQ=255) ttGCCGGCAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAAtata > 2:1777556/1‑100 (MQ=255) tGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑GAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCATAAATCCATAAGAAATATAAg < 1:3084021/100‑1 (MQ=255) tGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAg < 2:1858260/100‑1 (MQ=255) tGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAg > 1:2694716/1‑100 (MQ=255) gCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAACTATAAg < 1:51940/100‑1 (MQ=255) gTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTAt < 1:1619135/100‑1 (MQ=255) agcgccagcgccACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTg < 2:3118765/100‑1 (MQ=255) agcgccagcgccACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTg > 1:1564221/1‑100 (MQ=255) gcgccagcgccaCGGCAGCGGCGAACGTAAAAAACGTTAGCCAGGGAGAAAAACGCGTTTGGATCATCACCAAAAATCCATAATAAATATAAGGTTATTg < 2:2964072/100‑1 (MQ=255) gcgccagcgccaCGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTg < 1:1234400/100‑1 (MQ=255) ccagcgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCAAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGtaat < 1:2044910/100‑1 (MQ=255) agcgccaCGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGtaata > 2:1829106/1‑100 (MQ=255) cgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAAc < 2:616328/100‑1 (MQ=255) cgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCAAGCGATAATAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAAc < 1:2377140/100‑1 (MQ=255) gccaCGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAAc < 2:1380705/100‑1 (MQ=255) gccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACa < 2:1279906/100‑1 (MQ=255) ccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATAACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAg < 1:690064/100‑1 (MQ=255) ccaCGGAAGCGGCGAACGT‑CAAAACGTTACACAGCCAGAAAAAAGCGCTATGATCATCACCAAAAATCCATAATAAATATAAGGTCATTGTAATAAAc < 1:152836/98‑1 (MQ=255) cGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATa > 2:2751430/1‑100 (MQ=255) aGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGATATTGTAATAAACAGATAAGc > 1:1876720/1‑100 (MQ=255) aGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGcc < 2:1275765/100‑1 (MQ=255) gcggcgAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGcc < 1:382525/100‑1 (MQ=255) gcggcgAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGcc < 2:822224/100‑1 (MQ=255) cggcgAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGAAAAGcc > 1:2861903/1‑99 (MQ=255) ggcgAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTg > 2:420241/1‑100 (MQ=255) gcgAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTgga < 2:2743155/100‑3 (MQ=255) gcgAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGaa < 1:2445151/100‑1 (MQ=255) gcgAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGaa < 2:722692/100‑1 (MQ=255) cgAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGaa > 1:882478/1‑100 (MQ=255) gAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTAATTGTAATAAACAGATAAGCCTGAAtt > 2:3059238/1‑100 (MQ=255) aaCGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAAtt < 1:292475/100‑1 (MQ=255) aaCGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAATTa < 2:1034336/100‑1 (MQ=255) gTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAATTatg < 1:1563086/100‑1 (MQ=255) tAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAATTatgg > 2:2831009/1‑100 (MQ=255) | ATGAAATTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAATTATGG > NC_000913/1170234‑1170431 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |