New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4614132 =153 (1.240)13 (0.120) 9/160 NT 9.4% coding (652/780 nt) yjjV putative DNase
?NC_000913 4614163 = 114 (1.030)coding (683/780 nt) yjjV putative DNase
Rejected: Frequency below cutoff threshold.

ATACGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4614239‑4614132
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGG  >  NC_000913/4614163‑4614261
                                                                                                                                                                                                               
ATACGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTA                                                                                                             <  1:157962/100‑1
 TACGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAG                                                                                                            <  2:996737/100‑1
 TACGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAG                                                                                                            <  1:1215310/100‑1
 TACGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAG                                                                                                            >  1:154112/1‑100
  ACGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGG                                                                                                           <  2:1292148/100‑1
  ACGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGG                                                                                                           <  1:3353137/100‑1
   CGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGC                                                                                                          <  1:1724081/100‑1
   CGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGC                                                                                                          <  1:1597457/100‑1
   CGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGC                                                                                                          <  2:3313860/100‑1
   CGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGC                                                                                                          <  2:2916003/100‑1
   CGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGC                                                                                                          <  2:2669137/100‑1
   CGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTA                                                                                                             <  2:2105142/97‑1
     TGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTG                                                                                                        <  1:1197951/100‑1
      GTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGC                                                                                                       >  1:314499/1‑100
      GTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGC                                                                                                       <  2:517836/100‑1
       TTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCC                                                                                                      <  2:1311445/100‑1
       TTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCC                                                                                                      <  1:3062658/100‑1
        natgAAGCAACGCTTGCGCAATCGCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGC                                                                                                       >  1:2195106/5‑98
        TATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGGGAACACTCGGGCAGCCTGCTCCGGGCGGTTAGACTGCCC                                                                                                     >  1:2380346/1‑100
        TATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCC                                                                                                     >  2:2981355/1‑100
        TATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCC                                                                                                     >  1:2237478/1‑100
        TATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCC                                                                                                     >  1:1417645/1‑100
        TATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCC                                                                                                     >  1:887263/1‑100
        TATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCC                                                                                                     >  2:2143530/1‑100
                                                                       ACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGC                                      >  2:2332069/1‑100
                                                                        CACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCT                                     >  1:178439/1‑100
                                                                          CACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTA                                   >  1:1936340/1‑100
                                                                          CACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTA                                   >  2:223424/1‑100
                                                                          CACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTA                                   >  2:159104/1‑100
                                                                          CACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTA                                   >  2:159630/1‑100
                                                                           ACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAA                                  >  1:2884490/1‑100
                                                                            CGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAAT                                 >  2:89125/1‑100
                                                                              GGCAGCCTGCTCCGGGCGGTTAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAA                               >  2:2943763/1‑100
                                                                              GGCAGCCTGCTCCGGGCGGTTAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAA                               >  1:2952476/1‑100
                                                                               GCAGCCTGCTCCGGGCGGTTAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAAC                              >  1:241860/1‑100
                                                                               GCAGCCTGCTCCGGGCGGTTAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAAC                              <  1:89125/100‑1
                                                                                   CCTGCTCCGGGCGGTTAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGT                          >  1:2868763/1‑100
                                                                                                   AGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGT          <  2:2960949/100‑1
                                                                                                   AGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGT          >  1:986965/1‑100
                                                                                                    GGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTG         >  2:881296/1‑100
                                                                                                    GGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTG         >  2:2949488/1‑100
                                                                                                    GGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTG         >  2:1702993/1‑100
                                                                                                     GCTGCCCATGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGC        <  2:2799466/100‑1
                                                                                                      CTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCC       >  2:2993978/1‑100
                                                                                                       TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCG      <  2:851713/100‑1
                                                                                                       TGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCG      <  2:855446/100‑1
                                                                                                        GCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGT     <  1:1731284/100‑1
                                                                                                        GCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGT     >  2:2305186/1‑100
                                                                                                        GCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGT     >  2:1538642/1‑100
                                                                                                        GCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGT     <  1:2196601/100‑1
                                                                                                         CCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTA    >  1:2071372/1‑100
                                                                                                         CCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCATA    >  2:2465548/1‑100
                                                                                                         CCCGTGTGTTCGCCGTGCTTTGCGAGGTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTA    >  2:3136263/1‑100
                                                                                                           CGTGTGTTCGCCGTGCTTTGCGAGTTTCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGG  <  1:1073204/100‑1
                                                                                                           CGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGG  <  1:1819493/100‑1
                                                                                                                                                                                                               
ATACGTGTTATTAAGCAACGCTTGCGCAATCTCATCCGCCGGTTCCCGGCGCAACTCGCAAAGCACGGCGAACACACGGGCAGCCTGCTCCGGGCGGTTAGGCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4614239‑4614132
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGG  >  NC_000913/4614163‑4614261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.