New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4634391 =	115 (0.930)	7 (0.060)	5/164	NT	6.1%	coding (595/648 nt)	ytjC	phosphatase
	?	NC_000913	4634423 =	109 (0.960)					coding (627/648 nt)	ytjC	phosphatase
Rejected: Frequency below cutoff threshold.

CGGGAGATCGCCCAATTAATCTACGCTGTGAACTGCTGATTCCGATCCGTCGTTAACGCTGCAGCTCATCTAATGCAGGGGCGTCCAGATGCGAGATGTCCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4634496‑4634391 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAG  >  NC_000913/4634423‑4634519                                                                                                                                                                                                             CGGGAGATCGCCCAATTAATCTACGCTGTGAACTGCTGATTCCGATCCGTCGTTAACGCTGCAGCTCATCTAATGCAGGGGCGTCCAGATGCGAGATGTC                                                                                                         <  1:1158258/100‑1   GGAGATCGCCCAATTAATCTACGCTGTGAACTGCTGATTCCGATCCGTCGTTAACGCTGCAGCTCATCTAATGCCGGGGCGTCCAGATCCGAGATCTCCC                                                                                                       >  1:1008988/1‑100   GGAGATCGCCCAATTAATCTACGCTGTGAACTGCTGATTCCGATCCGTCGTTAACGCTGCAGCTCATCTAATGCAGGGGCGTCCAGATGCGAGATGTCCC                                                                                                       <  2:732014/100‑1      GATCGCCCAATTAATCTACGCTGTGAACTGCTGATTCCGATCCGTCGTTAACGCTGCAGCTCATCTAATGCAGGGGCGTCCAGATGCGAGATGTCCCCTG                                                                                                    <  1:309132/100‑1      GATCGCCCAATTAATCTACGCTGTGAACTGCTGATTCCGATCCGTCGTTAACGCTGCAGCTCATCTAATGCAGGGGCGTCCAGATGCGAGATGTCCCCTG                                                                                                    <  1:3006946/100‑1                                                                    ATCTAATGCAGGGGCGTCCAGATGCGAGATGTCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATT                                      >  1:2631612/1‑100                                                                     TCTAATGCAGGGGCGTCCAGATGCGAGATGTCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTG                                     >  1:1547124/1‑100                                                                     TCTAATGCAGGGGCGTCCAGATGCGAGATGTCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTG                                     >  1:2460627/1‑100                                                                      CTAATGCAGGGGCGTCCAGATGCGAGATGTCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGG                                    >  1:3039657/1‑100                                                                      CTAATGCAGGGGCGTCCAGATGCGAGATGTCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGG                                    >  2:1928149/1‑100                                                                       TAATGCAGGGGCGTCCAGATGCGAGATGTCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTTGG                                   >  1:2131695/1‑100                                                                         ATGCAGGGGCGTCCAGATGCGAGATGTCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCG                                 >  1:1760458/1‑100                                                                                                    CCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGG      >  2:417831/1‑100                                                                                                     CCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGG     >  2:3087565/1‑100                                                                                                      CCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTCGATTAATTGGGCGATCTCCCGCTTTGGCCTCTTCTGCCGGct    <  2:2294821/100‑3                                                                                                      CCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTTGGCGATCTCCCGCTTTGGCATCTTCTGCCG       >  1:2961794/1‑97                                                                                                      CCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGT    >  1:833411/1‑100                                                                                                      CCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGT    >  2:269198/1‑100                                                                                                      CCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGT    <  1:1152846/100‑1                                                                                                       CTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTA   <  1:2325133/100‑1                                                                                                       CTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTA   <  1:3282265/100‑1                                                                                                        TGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAG  <  1:3180297/100‑1                                                                                                        TGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAG  <  1:1623618/100‑1                                                                                                        TGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAG  <  2:459079/100‑1                                                                                                                                                                                                             CGGGAGATCGCCCAATTAATCTACGCTGTGAACTGCTGATTCCGATCCGTCGTTAACGCTGCAGCTCATCTAATGCAGGGGCGTCCAGATGCGAGATGTCCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4634496‑4634391 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAG  >  NC_000913/4634423‑4634519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.